BLASTX nr result

ID: Coptis24_contig00021594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021594
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37797.3| unnamed protein product [Vitis vinifera]              147   2e-33
ref|XP_002278724.2| PREDICTED: MATE efflux family protein 3, chl...   143   3e-32
ref|XP_002525810.1| DNA-damage-inducible protein f, putative [Ri...   132   5e-29
ref|XP_003545059.1| PREDICTED: MATE efflux family protein 3, chl...   125   8e-27
ref|XP_003518586.1| PREDICTED: MATE efflux family protein 3, chl...   124   1e-26

>emb|CBI37797.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score =  147 bits (370), Expect = 2e-33
 Identities = 86/148 (58%), Positives = 107/148 (72%), Gaps = 9/148 (6%)
 Frame = +1

Query: 187 RKRAFHVISSRVGSDYSVGQYDVKES------SDAEEEFDTLELVEIPSTPQ---SVKKE 339
           RK  F V ++ +GSD  V   +V+E+      +D  +  +  EL  I +T      VK+E
Sbjct: 79  RKHVFPVFNNHLGSDCGVDSSEVEENIVVEKGNDIGKSSEVRELKGITATLSRSLGVKRE 138

Query: 340 LIALSLPAIGGQAVEPLSQLMETAFIGRLGPVELASAGVSISIFNIISKLFNIPLLSIAT 519
           LI LSLPA+ GQA++PL+QLMETA+IGRLGPVELASAGVSISIFNIISKLFNIPLLSI+T
Sbjct: 139 LIMLSLPAMAGQALDPLAQLMETAYIGRLGPVELASAGVSISIFNIISKLFNIPLLSIST 198

Query: 520 SFVAEDIAKSGSMGSASDGGLKEESHNG 603
           SFVAEDI+K+    SAS+   +EES NG
Sbjct: 199 SFVAEDISKNAINNSASEEFYQEESTNG 226


>ref|XP_002278724.2| PREDICTED: MATE efflux family protein 3, chloroplastic-like [Vitis
           vinifera]
          Length = 601

 Score =  143 bits (360), Expect = 3e-32
 Identities = 86/148 (58%), Positives = 107/148 (72%), Gaps = 9/148 (6%)
 Frame = +1

Query: 187 RKRAFHVISSRVGSDYSVGQYDVKES------SDAEEEFDTLELVEIPSTPQ---SVKKE 339
           RK  F V ++ +GSD  V   +V+E+      +D  +  +  EL  I +T      VK+E
Sbjct: 79  RKHVFPVFNNHLGSDCGVDSSEVEENIVVEKGNDIGKSSEVRELKGITATLSRSLGVKRE 138

Query: 340 LIALSLPAIGGQAVEPLSQLMETAFIGRLGPVELASAGVSISIFNIISKLFNIPLLSIAT 519
           LI LSLPA+ GQA++PL+QLMETA+IGRLGPVELASAGVSISIFNIISKLFNIPLLSI+T
Sbjct: 139 LIMLSLPAMAGQALDPLAQLMETAYIGRLGPVELASAGVSISIFNIISKLFNIPLLSIST 198

Query: 520 SFVAEDIAKSGSMGSASDGGLKEESHNG 603
           SFVAEDI+K+    SAS+   +EES NG
Sbjct: 199 SFVAEDISKNAINNSASE-FYQEESTNG 225


>ref|XP_002525810.1| DNA-damage-inducible protein f, putative [Ricinus communis]
           gi|223534897|gb|EEF36584.1| DNA-damage-inducible protein
           f, putative [Ricinus communis]
          Length = 605

 Score =  132 bits (332), Expect = 5e-29
 Identities = 80/150 (53%), Positives = 104/150 (69%), Gaps = 11/150 (7%)
 Frame = +1

Query: 187 RKRAFHVISSRVGSDYSVGQYDVKE-SSDAEEEFDTLELVEIP--------STPQS--VK 333
           RK    ++ ++  S Y V   +V+E SS +EEE+      E+         + P+S   K
Sbjct: 71  RKPQIGIVYNQSSSGYGVESTNVQERSSSSEEEYALNSSTEVQVESSRVTINQPESSDAK 130

Query: 334 KELIALSLPAIGGQAVEPLSQLMETAFIGRLGPVELASAGVSISIFNIISKLFNIPLLSI 513
            +LI LSLPAI GQA+EPL+QLMETA+IGRLGPVEL SAGVSI+IFN ISKLFN+PLLS+
Sbjct: 131 HQLIMLSLPAIAGQAIEPLTQLMETAYIGRLGPVELGSAGVSITIFNNISKLFNMPLLSV 190

Query: 514 ATSFVAEDIAKSGSMGSASDGGLKEESHNG 603
           ATSFVAE+IAK+G   S+ +  ++E S NG
Sbjct: 191 ATSFVAEEIAKNGK-NSSLEKVIQENSTNG 219


>ref|XP_003545059.1| PREDICTED: MATE efflux family protein 3, chloroplastic-like
           [Glycine max]
          Length = 597

 Score =  125 bits (313), Expect = 8e-27
 Identities = 65/85 (76%), Positives = 74/85 (87%)
 Frame = +1

Query: 313 STPQSVKKELIALSLPAIGGQAVEPLSQLMETAFIGRLGPVELASAGVSISIFNIISKLF 492
           S    VK+ELI+L+LPA+  QA++PL+QLMETA+IGRLG VELASAGVSISIFNIISKLF
Sbjct: 147 SASVDVKRELISLTLPALASQAIDPLAQLMETAYIGRLGTVELASAGVSISIFNIISKLF 206

Query: 493 NIPLLSIATSFVAEDIAKSGSMGSA 567
           NIPLLS+ATSFVAEDIAKS S   A
Sbjct: 207 NIPLLSVATSFVAEDIAKSSSAADA 231


>ref|XP_003518586.1| PREDICTED: MATE efflux family protein 3, chloroplastic-like
           [Glycine max]
          Length = 587

 Score =  124 bits (311), Expect = 1e-26
 Identities = 67/104 (64%), Positives = 82/104 (78%)
 Frame = +1

Query: 256 KESSDAEEEFDTLELVEIPSTPQSVKKELIALSLPAIGGQAVEPLSQLMETAFIGRLGPV 435
           K  ++AE E  +   V+       V++ELI+L+LPA+  QA++PL+QLMETA+IGRLG V
Sbjct: 62  KAEAEAEAEASSFSSVD-------VRRELISLTLPALASQAIDPLAQLMETAYIGRLGTV 114

Query: 436 ELASAGVSISIFNIISKLFNIPLLSIATSFVAEDIAKSGSMGSA 567
           ELASAGVSISIFNIISKLFNIPLLS+ATSFVAEDIAK+ S   A
Sbjct: 115 ELASAGVSISIFNIISKLFNIPLLSVATSFVAEDIAKASSTADA 158


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