BLASTX nr result

ID: Coptis24_contig00021590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021590
         (1374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96612.1| unknown [Populus trichocarpa x Populus deltoides]      339   9e-91
ref|XP_003539850.1| PREDICTED: uncharacterized protein LOC100815...   332   1e-88
ref|NP_001242895.1| uncharacterized protein LOC100817151 [Glycin...   332   1e-88
ref|XP_002299772.1| predicted protein [Populus trichocarpa] gi|2...   323   8e-86
ref|XP_002513720.1| conserved hypothetical protein [Ricinus comm...   315   1e-83

>gb|ABK96612.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 359

 Score =  339 bits (870), Expect = 9e-91
 Identities = 196/353 (55%), Positives = 239/353 (67%), Gaps = 10/353 (2%)
 Frame = -1

Query: 1275 ENEEKNWSEQVENLVDTGNIDEAISLLETE-------NPAPDLK-QLSCALTDLANLYAS 1120
            E   +NWSE VE+LV   + + AI+LLETE       NP+     QL  ALT+LA LY+S
Sbjct: 12   EQSNQNWSETVEDLVTACDTEGAITLLETEVSRLETLNPSEAANLQLVSALTELAKLYSS 71

Query: 1119 RGFSLKSDELQTRAFLVKQRAQPSSRDVENVGKKD-VEKITVSGLHGS-DCAATSTCNVT 946
            + FSLKSDEL  RA  +KQR   SS DVE+V K+D + K       G  + ++    +V+
Sbjct: 72   KHFSLKSDELLFRASFIKQR---SSGDVESVEKEDEISKCNAVSNDGHLEKSSNPRDDVS 128

Query: 945  VSSDDDWEAVVDRGSVEVLSPQNDEGVSKLSLDDTEVIKPKRRGRGSFLYKKNGLYSDQQ 766
              SDDDWEA+ D    E+LSPQ+   VS + L+D +V   KRRGRG F YKK+ LYSD+Q
Sbjct: 129  PCSDDDWEAIADHAPDELLSPQSLPSVSNICLEDAKVQTSKRRGRGPFTYKKHELYSDRQ 188

Query: 765  PNVAVTHDPDNEADHHSSEENTVKRNASYGTNHVLVLADITPSTRTTDLEKHFENFRDRG 586
             +  +  D D+E D   S +NT   N+ YGT+HVLVLAD  PS RTTDLEK FE+F+DRG
Sbjct: 189  SDATLVDDVDDE-DLGRSTQNTELTNSKYGTHHVLVLADFPPSMRTTDLEKLFEDFKDRG 247

Query: 585  FVIHWVNDTVALAVFRTPSIALEARNTIHCPFNVRPLSEDDSLLCSIARRDLEPPVPRPK 406
            FVI W+NDT ALAVF+TPSIALEARN I C F VR L  DD L+ SI  +DLEPP  RPK
Sbjct: 248  FVIRWINDTAALAVFQTPSIALEARNHIQCSFTVRILDADDELMGSIPTKDLEPPRQRPK 307

Query: 405  TSVRTAQRLIAQGMGRKLSSTTFGSSELRKQEEARRDRIVTRQMLRDDAWGPD 247
            TS RTAQRLIA GMG KL   TFGS EL+ QEE R++RIVTRQ ++DDAWG D
Sbjct: 308  TSARTAQRLIAHGMGLKL-PMTFGSRELKNQEETRKNRIVTRQKMKDDAWGDD 359


>ref|XP_003539850.1| PREDICTED: uncharacterized protein LOC100815577 [Glycine max]
          Length = 357

 Score =  332 bits (852), Expect = 1e-88
 Identities = 191/357 (53%), Positives = 239/357 (66%), Gaps = 15/357 (4%)
 Frame = -1

Query: 1278 MENEEKNWSEQVENLVDTGNIDEAISLLETENPAPDLKQLSCALTDLANLYASRGFSLKS 1099
            ME   +NWSE VE+LVD G+++ AISLLE+     +    + AL+DLANLY+SRGFSLK+
Sbjct: 1    MEKGIQNWSESVEDLVDAGDVESAISLLESVAETLNPSDSASALSDLANLYSSRGFSLKA 60

Query: 1098 DELQTRAFLVKQRAQPSSRDVENVGKKD-----VEKITVSGLHGSDCAA-------TSTC 955
            D L +RA L+KQ    S+   E V K+      V+  TV+    ++ +          T 
Sbjct: 61   DHLLSRASLLKQ-LHHSNTPAERVPKESKEDGVVKSTTVASRRAAEGSVEKRGEFPAQTS 119

Query: 954  NVTVSSDDDWEAVVDRGSVEVLSPQN---DEGVSKLSLDDTEVIKPKRRGRGSFLYKKNG 784
                SSD+DWEA+ D    E+L   +     G+S L L++ +   PKRRGRG+F Y+K  
Sbjct: 120  AAGGSSDEDWEAIADLEPDELLPTVSWDCSSGISNLKLENAKSGTPKRRGRGTFSYEKKE 179

Query: 783  LYSDQQPNVAVTHDPDNEADHHSSEENTVKRNASYGTNHVLVLADITPSTRTTDLEKHFE 604
            LYSDQ  + +V  D + E    SSE+NT  + + YGT HVLVLAD +PSTRTT+LEK FE
Sbjct: 180  LYSDQLLDRSVV-DVEREETPRSSEDNTDVQISKYGTGHVLVLADFSPSTRTTELEKLFE 238

Query: 603  NFRDRGFVIHWVNDTVALAVFRTPSIALEARNTIHCPFNVRPLSEDDSLLCSIARRDLEP 424
            NF+DRGFVI WVNDTVALAVFRTP++ALEA N++ C F  R L EDD+LL SI  RDLEP
Sbjct: 239  NFQDRGFVIRWVNDTVALAVFRTPAVALEALNSVRCSFTTRILDEDDTLLSSIKARDLEP 298

Query: 423  PVPRPKTSVRTAQRLIAQGMGRKLSSTTFGSSELRKQEEARRDRIVTRQMLRDDAWG 253
            P  RPKTS + AQRLIA GMG KLSST  GS E RKQE+ARR+RIVTRQ LRD+AWG
Sbjct: 299  PRLRPKTSAQAAQRLIAHGMGLKLSSTGVGSREYRKQEDARRERIVTRQKLRDEAWG 355


>ref|NP_001242895.1| uncharacterized protein LOC100817151 [Glycine max]
            gi|255642348|gb|ACU21438.1| unknown [Glycine max]
          Length = 366

 Score =  332 bits (851), Expect = 1e-88
 Identities = 194/367 (52%), Positives = 244/367 (66%), Gaps = 23/367 (6%)
 Frame = -1

Query: 1278 MENEE--KNWSEQVENLVDTGNIDEAISLLE----TENPAPDLKQL--SCALTDLANLYA 1123
            ME E+  +NWSE VE+LVD G+++ AISLLE    T NP+    QL  + AL+DLANLY+
Sbjct: 1    MEKEKGIENWSEAVEDLVDAGDVESAISLLESVVETLNPSDSASQLPLASALSDLANLYS 60

Query: 1122 SRGFSLKSDELQTRAFLVKQRAQPSS--RDVENVGKKD--VEKITVSGLHGSDCAA---- 967
            S+GFSLK+D L +RA ++KQ    +S    V    K+D  V+  +V+    ++ +     
Sbjct: 61   SKGFSLKADHLHSRASVLKQLHHSNSPGEQVPKESKEDGAVKSTSVASRRAAEGSVEKRA 120

Query: 966  ----TSTCNVTVSSDDDWEAVVDRGSVEVL---SPQNDEGVSKLSLDDTEVIKPKRRGRG 808
                  T      SD+DWEA+ D    E+L   S     G+S L L++ +   PKRRGRG
Sbjct: 121  AEFPAQTSAGGGCSDEDWEAIADLEPDELLPTVSSDCSSGISNLKLENAKSGTPKRRGRG 180

Query: 807  SFLYKKNGLYSDQQPNVAVTHDPDNEADHHSSEENTVKRNASYGTNHVLVLADITPSTRT 628
            +F Y+K  LYSDQ  + +V  D + E  H SSE+N   +N+ YGT+HVLVLAD +PSTRT
Sbjct: 181  TFSYEKKELYSDQLLDSSVV-DVEQEETHRSSEDNKDVQNSKYGTSHVLVLADFSPSTRT 239

Query: 627  TDLEKHFENFRDRGFVIHWVNDTVALAVFRTPSIALEARNTIHCPFNVRPLSEDDSLLCS 448
            T+LEK FENF+DRG VI WVNDTVALAVFRTP +ALEA N++ C F  R L EDD+LL S
Sbjct: 240  TELEKLFENFKDRGLVIRWVNDTVALAVFRTPPVALEALNSVRCSFTTRILDEDDTLLSS 299

Query: 447  IARRDLEPPVPRPKTSVRTAQRLIAQGMGRKLSSTTFGSSELRKQEEARRDRIVTRQMLR 268
            I  RDLEPP  RPKTS + AQRLIA  MG KLSST  GS E RKQE+ARR+RIVTRQ LR
Sbjct: 300  IKARDLEPPRQRPKTSAQAAQRLIAHSMGLKLSSTGAGSREYRKQEDARRERIVTRQKLR 359

Query: 267  DDAWGPD 247
            D+AWG D
Sbjct: 360  DEAWGDD 366


>ref|XP_002299772.1| predicted protein [Populus trichocarpa] gi|222847030|gb|EEE84577.1|
            predicted protein [Populus trichocarpa]
          Length = 370

 Score =  323 bits (827), Expect = 8e-86
 Identities = 187/361 (51%), Positives = 233/361 (64%), Gaps = 18/361 (4%)
 Frame = -1

Query: 1275 ENEEKNWSEQVENLVDTGNIDEAISLLETE-------NPAPDLK-QLSCALTDLANLYAS 1120
            E   +NWSE VE+LV  G+ + AI+LLETE       NP+     QL  ALT+LA LY+S
Sbjct: 12   EQSNQNWSETVEDLVTAGDTEGAITLLETEVSRLETLNPSEAANLQLVSALTELAKLYSS 71

Query: 1119 RGFSLKSDELQTRAFLVKQRAQPSSRDVENVGKKDVEKITVSGLHGSDCAATSTCNVTVS 940
            + FSLKSDEL  RA  +KQR+   S    +   +  ++I+      +D    S  ++  +
Sbjct: 72   KHFSLKSDELLFRASFIKQRSSGYSFFFFSRSVEKEDEISKCNAVSNDGKLISYVSLIKN 131

Query: 939  SD----------DDWEAVVDRGSVEVLSPQNDEGVSKLSLDDTEVIKPKRRGRGSFLYKK 790
             +           DWEA+ D    E+LSPQ+   VS + L+D +V   KRRGRG F YKK
Sbjct: 132  ENFMIEMLLWYATDWEAIADHAPDELLSPQSLPSVSNICLEDAKVQTSKRRGRGPFTYKK 191

Query: 789  NGLYSDQQPNVAVTHDPDNEADHHSSEENTVKRNASYGTNHVLVLADITPSTRTTDLEKH 610
            + LYSD+Q +  +  D D+E D   S +NT   N+ YGT+HVLVLAD  PS RTTDLEK 
Sbjct: 192  HELYSDRQSDATLVDDVDDE-DLGRSTQNTELTNSKYGTHHVLVLADFPPSMRTTDLEKL 250

Query: 609  FENFRDRGFVIHWVNDTVALAVFRTPSIALEARNTIHCPFNVRPLSEDDSLLCSIARRDL 430
            FE+F+DRGFVI W+NDT ALAVF+TPSIALEARN I C F VR L  DD L+ SI  +DL
Sbjct: 251  FEDFKDRGFVIRWINDTAALAVFQTPSIALEARNHIQCSFTVRILDADDELMGSIPTKDL 310

Query: 429  EPPVPRPKTSVRTAQRLIAQGMGRKLSSTTFGSSELRKQEEARRDRIVTRQMLRDDAWGP 250
            EPP  RPKTS RTAQRLIA GMG KL   TFGS EL+ QEE R++RIVTRQ ++DDAWG 
Sbjct: 311  EPPRQRPKTSARTAQRLIAHGMGLKL-PMTFGSRELKNQEETRKNRIVTRQKMKDDAWGD 369

Query: 249  D 247
            D
Sbjct: 370  D 370


>ref|XP_002513720.1| conserved hypothetical protein [Ricinus communis]
            gi|223547171|gb|EEF48667.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 383

 Score =  315 bits (808), Expect = 1e-83
 Identities = 188/371 (50%), Positives = 237/371 (63%), Gaps = 32/371 (8%)
 Frame = -1

Query: 1263 KNWSEQVENLVDTGNIDEAISLLET--------ENPAPDLK-QLSCALTDLANLYASRGF 1111
            +NWSE VE+LV  G+I+ AISLLET         +P+  +  QL+ AL +L+ LY++  F
Sbjct: 13   QNWSEAVEDLVTAGDINGAISLLETVVSKLEGISSPSETVDLQLASALDELSKLYSTNHF 72

Query: 1110 SLKSDELQTRAFLVKQRAQPSSRDVENVG-KKDVEKITVSGLHGSDCAA----------- 967
            SLKSDEL +RA L+K RA  S   V   G +KDV++  VS  +   C             
Sbjct: 73   SLKSDELLSRASLLKHRALHSRPSVNTDGLEKDVKEENVSKSNQLLCCKDPIADGSSMNG 132

Query: 966  -----------TSTCNVTVSSDDDWEAVVDRGSVEVLSPQNDEGVSKLSLDDTEVIKPKR 820
                        S+CN    SDDDWEA+ DR   E+LS      VS LSL+DT+V  PKR
Sbjct: 133  HFEESLSPPDDASSCNGP--SDDDWEAIADRAPSELLSSPGLPSVSNLSLEDTKVQGPKR 190

Query: 819  RGRGSFLYKKNGLYSDQQPNVAVTHDPDNEADHHSSEENTVKRNASYGTNHVLVLADITP 640
            RGRG+F Y +  LYSD+Q +V+ + D ++E    S E+N    ++ YGT HVLVLAD  P
Sbjct: 191  RGRGTFSYNQEKLYSDRQSDVSFSGDTEDENLSKSKEQNMKPIHSKYGTRHVLVLADFPP 250

Query: 639  STRTTDLEKHFENFRDRGFVIHWVNDTVALAVFRTPSIALEARNTIHCPFNVRPLSEDDS 460
            STRT DLEK F +F  RG VI WVNDT+ALAVF+TP+IALEA+N +  PF V  L EDD 
Sbjct: 251  STRTIDLEKLFRDFTGRGVVIRWVNDTMALAVFQTPAIALEAQNHVQFPFKVHILDEDDI 310

Query: 459  LLCSIARRDLEPPVPRPKTSVRTAQRLIAQGMGRKLSSTTFGSSELRKQEEARRDRIVTR 280
            +L  I  +DLEPP  RP+TS RTAQRLIAQGMG KL ST+FGS EL+ QEEAR+ RIV+R
Sbjct: 311  VLSLIPVKDLEPPRRRPQTSTRTAQRLIAQGMGLKLPSTSFGSRELKNQEEARKIRIVSR 370

Query: 279  QMLRDDAWGPD 247
            Q + +DAWG D
Sbjct: 371  QKMIEDAWGDD 381


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