BLASTX nr result

ID: Coptis24_contig00021568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021568
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK07811.1| predicted protein [Hordeum vulgare subsp. vulgare]     76   3e-12
gb|EAZ31979.1| hypothetical protein OsJ_16154 [Oryza sativa Japo...    76   3e-12
emb|CAJ86309.1| H0525G02.6 [Oryza sativa Indica Group]                 76   3e-12
ref|NP_001053873.1| Os04g0615900 [Oryza sativa Japonica Group] g...    76   3e-12
emb|CAD41797.2| OSJNBa0008M17.13 [Oryza sativa Japonica Group]         76   3e-12

>dbj|BAK07811.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 907

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
 Frame = -1

Query: 323 NDAKSSLIPVVGMLFXXXXXXXXXXXXXXXNVGFSVRKKTMYSDSKGIVRRRDLCCSWEG 144
           N     ++P V MLF                VGF VR+ T+++ SK I+ RR   CS EG
Sbjct: 101 NSCDEKMLPEVNMLFDDENNAYEFYNIYAEKVGFFVRRSTLWTTSKNIITRRTFVCSREG 160

Query: 143 NYQMKA---QPKKRREDKRCGCPAMLMVKLNEDGKYVVTSFVEEHNHSL 6
             + K    + K  R + R GCPA + ++L  +GKY +T FV  HNH L
Sbjct: 161 FREKKKGAKESKSPRPETRIGCPASMTIRLTPNGKYRLTEFVPNHNHQL 209



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
 Frame = -1

Query: 230 VGFSVRKKTMYSDSKGIVRRRDLCCSWEGNYQMKA---QPKKRREDKRCGCPAMLMVKLN 60
           +GF+VR+ +M  +++ I+ RR   CS EG  + K    + KK R + R GCPA ++++L 
Sbjct: 261 IGFNVRRASMTVNAENIITRRMFVCSKEGFREKKRGANRVKKPRPETRTGCPACMVIRLA 320

Query: 59  EDGKYVVTSFVEEHNHSL 6
            +GKY VT FV  HNH L
Sbjct: 321 SNGKYNVTEFVTFHNHGL 338


>gb|EAZ31979.1| hypothetical protein OsJ_16154 [Oryza sativa Japonica Group]
          Length = 961

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/104 (40%), Positives = 56/104 (53%)
 Frame = -1

Query: 317 AKSSLIPVVGMLFXXXXXXXXXXXXXXXNVGFSVRKKTMYSDSKGIVRRRDLCCSWEGNY 138
           A +  +P+VGM+F               NVGFSVRK       K + R R   CS EG +
Sbjct: 180 ANAGGVPIVGMVFENEEKAYEYYASYAGNVGFSVRKGLWDKTVKNVARSRVFVCSREG-F 238

Query: 137 QMKAQPKKRREDKRCGCPAMLMVKLNEDGKYVVTSFVEEHNHSL 6
           + K + K+ R + R GCPA + +KL  +GKY V  FVE+HNH L
Sbjct: 239 RSKNEAKRPRPETRTGCPARIAIKLVSNGKYRVAEFVEDHNHQL 282


>emb|CAJ86309.1| H0525G02.6 [Oryza sativa Indica Group]
          Length = 961

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/104 (40%), Positives = 56/104 (53%)
 Frame = -1

Query: 317 AKSSLIPVVGMLFXXXXXXXXXXXXXXXNVGFSVRKKTMYSDSKGIVRRRDLCCSWEGNY 138
           A +  +P+VGM+F               NVGFSVRK       K + R R   CS EG +
Sbjct: 180 ANAGGVPIVGMVFENEEKAYEYYASYAGNVGFSVRKGLWDKTVKNVARSRVFVCSREG-F 238

Query: 137 QMKAQPKKRREDKRCGCPAMLMVKLNEDGKYVVTSFVEEHNHSL 6
           + K + K+ R + R GCPA + +KL  +GKY V  FVE+HNH L
Sbjct: 239 RSKNEAKRPRPETRTGCPARIAIKLVSNGKYRVAEFVEDHNHQL 282


>ref|NP_001053873.1| Os04g0615900 [Oryza sativa Japonica Group]
           gi|113565444|dbj|BAF15787.1| Os04g0615900, partial
           [Oryza sativa Japonica Group]
          Length = 684

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/104 (40%), Positives = 56/104 (53%)
 Frame = -1

Query: 317 AKSSLIPVVGMLFXXXXXXXXXXXXXXXNVGFSVRKKTMYSDSKGIVRRRDLCCSWEGNY 138
           A +  +P+VGM+F               NVGFSVRK       K + R R   CS EG +
Sbjct: 180 ANAGGVPIVGMVFENEEKAYEYYASYAGNVGFSVRKGLWDKTVKNVARSRVFVCSREG-F 238

Query: 137 QMKAQPKKRREDKRCGCPAMLMVKLNEDGKYVVTSFVEEHNHSL 6
           + K + K+ R + R GCPA + +KL  +GKY V  FVE+HNH L
Sbjct: 239 RSKNEAKRPRPETRTGCPARIAIKLVSNGKYRVAEFVEDHNHQL 282


>emb|CAD41797.2| OSJNBa0008M17.13 [Oryza sativa Japonica Group]
          Length = 961

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/104 (40%), Positives = 56/104 (53%)
 Frame = -1

Query: 317 AKSSLIPVVGMLFXXXXXXXXXXXXXXXNVGFSVRKKTMYSDSKGIVRRRDLCCSWEGNY 138
           A +  +P+VGM+F               NVGFSVRK       K + R R   CS EG +
Sbjct: 180 ANAGGVPIVGMVFENEEKAYEYYASYAGNVGFSVRKGLWDKTVKNVARSRVFVCSREG-F 238

Query: 137 QMKAQPKKRREDKRCGCPAMLMVKLNEDGKYVVTSFVEEHNHSL 6
           + K + K+ R + R GCPA + +KL  +GKY V  FVE+HNH L
Sbjct: 239 RSKNEAKRPRPETRTGCPARIAIKLVSNGKYRVAEFVEDHNHQL 282


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