BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021558
         (834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis ...   284   2e-74
ref|XP_002875045.1| ATRPS13A [Arabidopsis lyrata subsp. lyrata] ...   283   3e-74
ref|XP_002511695.1| 40S ribosomal protein S13, putative [Ricinus...   283   3e-74
gb|ABK23173.1| unknown [Picea sitchensis]                             283   3e-74
ref|NP_001237229.1| 40S ribosomal protein S13 [Glycine max] gi|3...   282   7e-74

>ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis vinifera]
           gi|147820740|emb|CAN69640.1| hypothetical protein
           VITISV_028568 [Vitis vinifera]
           gi|296089171|emb|CBI38874.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score =  284 bits (727), Expect = 2e-74
 Identities = 141/151 (93%), Positives = 146/151 (96%)
 Frame = +2

Query: 86  MGRMHSRGKGISSSALPYKRTPPSWLKTSSQDVDESICKFAKKGLTPSQIGVLLRDSHGI 265
           MGRMHSRGKGISSSALPYKRTPPSWLK SSQDV+E+ICKFAKKG+TPSQIGV+LRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGMTPSQIGVILRDSHGI 60

Query: 266 AQVKVVTGSKVLRILKAHGLAPEIPEDLYQLIKKAVAIRKHLERNRKDKDSKFRLILVES 445
           AQVK VTGSK+LRILKAHGLAPEIPEDLY LIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 446 RIHRLARYYKTIKKLPPVWKYESTTASTLVA 538
           RIHRLARYYK  KKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKRTKKLPPVWKYESTTASTLVA 151


>ref|XP_002875045.1| ATRPS13A [Arabidopsis lyrata subsp. lyrata]
           gi|297320882|gb|EFH51304.1| ATRPS13A [Arabidopsis lyrata
           subsp. lyrata]
          Length = 151

 Score =  283 bits (725), Expect = 3e-74
 Identities = 141/151 (93%), Positives = 145/151 (96%)
 Frame = +2

Query: 86  MGRMHSRGKGISSSALPYKRTPPSWLKTSSQDVDESICKFAKKGLTPSQIGVLLRDSHGI 265
           MGRMHSRGKGIS+SALPYKR PPSWLKT+SQDVDESICKFAKKGLTPSQIGV+LRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRPPPSWLKTTSQDVDESICKFAKKGLTPSQIGVILRDSHGI 60

Query: 266 AQVKVVTGSKVLRILKAHGLAPEIPEDLYQLIKKAVAIRKHLERNRKDKDSKFRLILVES 445
            QVK VTGSK+LRILKAHGLAPEIPEDLY LIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  PQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 446 RIHRLARYYKTIKKLPPVWKYESTTASTLVA 538
           RIHRLARYYK  KKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|XP_002511695.1| 40S ribosomal protein S13, putative [Ricinus communis]
           gi|223548875|gb|EEF50364.1| 40S ribosomal protein S13,
           putative [Ricinus communis]
          Length = 151

 Score =  283 bits (724), Expect = 3e-74
 Identities = 141/151 (93%), Positives = 145/151 (96%)
 Frame = +2

Query: 86  MGRMHSRGKGISSSALPYKRTPPSWLKTSSQDVDESICKFAKKGLTPSQIGVLLRDSHGI 265
           MGRMHSRGKGIS+SALPYKRTPPSWLK SSQDVDE+ICKFAKKGL PSQIGV+LRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVDENICKFAKKGLRPSQIGVILRDSHGI 60

Query: 266 AQVKVVTGSKVLRILKAHGLAPEIPEDLYQLIKKAVAIRKHLERNRKDKDSKFRLILVES 445
           AQVK VTGSK+LRILKAHGLAPEIPEDLY LIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 446 RIHRLARYYKTIKKLPPVWKYESTTASTLVA 538
           RIHRLARYYK  KKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>gb|ABK23173.1| unknown [Picea sitchensis]
          Length = 151

 Score =  283 bits (724), Expect = 3e-74
 Identities = 139/151 (92%), Positives = 146/151 (96%)
 Frame = +2

Query: 86  MGRMHSRGKGISSSALPYKRTPPSWLKTSSQDVDESICKFAKKGLTPSQIGVLLRDSHGI 265
           MGRMHSRGKGISSSALPYKRTPPSWLK SSQDV+++ICKFAKKGLTPSQIGV+LRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 266 AQVKVVTGSKVLRILKAHGLAPEIPEDLYQLIKKAVAIRKHLERNRKDKDSKFRLILVES 445
           AQVK VTGSKVLRILKAHGLAPEIPEDLY LIKKAVA+RKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKVLRILKAHGLAPEIPEDLYHLIKKAVAVRKHLERNRKDKDSKFRLILVES 120

Query: 446 RIHRLARYYKTIKKLPPVWKYESTTASTLVA 538
           R+HRLARYYK +KKLPPVWKYES TASTLVA
Sbjct: 121 RVHRLARYYKRVKKLPPVWKYESATASTLVA 151


>ref|NP_001237229.1| 40S ribosomal protein S13 [Glycine max]
           gi|356514135|ref|XP_003525762.1| PREDICTED: 40S
           ribosomal protein S13-like [Glycine max]
           gi|356514137|ref|XP_003525763.1| PREDICTED: 40S
           ribosomal protein S13-like [Glycine max]
           gi|356563264|ref|XP_003549884.1| PREDICTED: 40S
           ribosomal protein S13-like [Glycine max]
           gi|54039313|sp|P62302.1|RS13_SOYBN RecName: Full=40S
           ribosomal protein S13 gi|44662862|gb|AAS47510.1|
           ribosomal protein S13 [Glycine max]
           gi|161367348|gb|ABX71080.1| ribosomal protein S13
           [Glycine max] gi|255625887|gb|ACU13288.1| unknown
           [Glycine max]
          Length = 151

 Score =  282 bits (721), Expect = 7e-74
 Identities = 140/151 (92%), Positives = 145/151 (96%)
 Frame = +2

Query: 86  MGRMHSRGKGISSSALPYKRTPPSWLKTSSQDVDESICKFAKKGLTPSQIGVLLRDSHGI 265
           MGRMHSRGKGISSSALPYKRTPPSWLK SSQDV+E+ICKFAKKGLTPSQIGV+LRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 266 AQVKVVTGSKVLRILKAHGLAPEIPEDLYQLIKKAVAIRKHLERNRKDKDSKFRLILVES 445
           AQV  VTGSK+LRILKAHGLAPEIPEDLY LIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 446 RIHRLARYYKTIKKLPPVWKYESTTASTLVA 538
           RIHRLARYYK  KKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151