BLASTX nr result

ID: Coptis24_contig00021541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021541
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283592.2| PREDICTED: protochlorophyllide-dependent tra...   343   1e-92
ref|XP_003629726.1| Pheophorbide a oxygenase [Medicago truncatul...   337   8e-91
ref|XP_004170632.1| PREDICTED: protochlorophyllide-dependent tra...   336   1e-90
ref|XP_004144089.1| PREDICTED: protochlorophyllide-dependent tra...   336   1e-90
ref|XP_004144087.1| PREDICTED: protochlorophyllide-dependent tra...   333   2e-89

>ref|XP_002283592.2| PREDICTED: protochlorophyllide-dependent translocon component 52,
           chloroplastic-like [Vitis vinifera]
          Length = 532

 Score =  343 bits (880), Expect = 1e-92
 Identities = 148/192 (77%), Positives = 169/192 (88%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1   PIAAICDLDKKVPHARKVIGLDIVIWWDRNEGKWKVFDDSCPHRLAPLSEGRIDQWGRLQ 180
           P+  +CDLDK++PHA+KVIGLD+V+WWDRNE  WKVFDD CPHRLAPLSEGRIDQWGRLQ
Sbjct: 84  PVMPVCDLDKRIPHAKKVIGLDVVVWWDRNENAWKVFDDMCPHRLAPLSEGRIDQWGRLQ 143

Query: 181 CVYHGWCFNGSGDCKFIPQAPPDGPQIHTSKKACASAYPSFEQNKILWFWPRSEPQYKDI 360
           CVYHGWCFNGSGDCKFIPQAPPDGP +HT KKAC S YPS  QN I+WFWP ++PQYKDI
Sbjct: 144 CVYHGWCFNGSGDCKFIPQAPPDGPPVHTFKKACVSVYPSTVQNDIVWFWPNTDPQYKDI 203

Query: 361 GAKEQPPCVPELDDPSFTSLLMSRDLPYGYEVLIENLMDPAHVPYAHYGILT-PSRTPRV 537
             K +PP +PELDDPS+T L+ +R++PYGYEVLIENLMDPAHVPYAHYGI+T PS+  RV
Sbjct: 204 LMKNKPPYIPELDDPSYTRLMGNREIPYGYEVLIENLMDPAHVPYAHYGIMTVPSQKKRV 263

Query: 538 KADREGGMPLEI 573
           KADREGG PLE+
Sbjct: 264 KADREGGRPLEM 275


>ref|XP_003629726.1| Pheophorbide a oxygenase [Medicago truncatula]
           gi|355523748|gb|AET04202.1| Pheophorbide a oxygenase
           [Medicago truncatula]
          Length = 529

 Score =  337 bits (864), Expect = 8e-91
 Identities = 147/192 (76%), Positives = 170/192 (88%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1   PIAAICDLDKKVPHARKVIGLDIVIWWDRNEGKWKVFDDSCPHRLAPLSEGRIDQWGRLQ 180
           P+  ICDLDK+ PHA+KV+G+D+VIWWDRNE  W+VFDD+CPHRLAPLSEGRIDQWGRLQ
Sbjct: 87  PLMPICDLDKRAPHAKKVMGIDVVIWWDRNESAWQVFDDACPHRLAPLSEGRIDQWGRLQ 146

Query: 181 CVYHGWCFNGSGDCKFIPQAPPDGPQIHTSKKACASAYPSFEQNKILWFWPRSEPQYKDI 360
           CVYHGWCFNGSGDCKFIPQAPP+GP IHTSKKAC +AYPS  QN ILWFWP S+PQYKDI
Sbjct: 147 CVYHGWCFNGSGDCKFIPQAPPEGPPIHTSKKACVAAYPSTVQNDILWFWPNSDPQYKDI 206

Query: 361 GAKEQPPCVPELDDPSFTSLLMSRDLPYGYEVLIENLMDPAHVPYAHYGIL-TPSRTPRV 537
             ++ PP +PE+DDPSFTSL+ +RD+ YGYEVLIENLMDP+HVPYAHYG++ TP   P+V
Sbjct: 207 ITRKTPPFIPEIDDPSFTSLMGNRDIAYGYEVLIENLMDPSHVPYAHYGLMKTPQ--PKV 264

Query: 538 KADREGGMPLEI 573
           KADREGG PLE+
Sbjct: 265 KADREGGRPLEL 276


>ref|XP_004170632.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
           chloroplastic-like [Cucumis sativus]
          Length = 538

 Score =  336 bits (862), Expect = 1e-90
 Identities = 141/191 (73%), Positives = 164/191 (85%)
 Frame = +1

Query: 1   PIAAICDLDKKVPHARKVIGLDIVIWWDRNEGKWKVFDDSCPHRLAPLSEGRIDQWGRLQ 180
           PI  ICDLDK+VPH ++V+G+D+V+WWD+NE  WKVFDD CPHRLAPLSEGRIDQWGRLQ
Sbjct: 81  PIMPICDLDKRVPHGKRVMGIDVVVWWDKNESGWKVFDDLCPHRLAPLSEGRIDQWGRLQ 140

Query: 181 CVYHGWCFNGSGDCKFIPQAPPDGPQIHTSKKACASAYPSFEQNKILWFWPRSEPQYKDI 360
           CVYHGWCFNGSGDCKFIPQAPPDGP +HTSK+AC S YPS  QN ILWFWP S+PQYKDI
Sbjct: 141 CVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVSVYPSVVQNDILWFWPNSDPQYKDI 200

Query: 361 GAKEQPPCVPELDDPSFTSLLMSRDLPYGYEVLIENLMDPAHVPYAHYGILTPSRTPRVK 540
            AK+ PP +PE+DDPS+  L++SRDLPYGYE+L ENLMDPAHVPYAHYG++   +T   K
Sbjct: 201 MAKKTPPYIPEIDDPSYAKLIISRDLPYGYEILTENLMDPAHVPYAHYGLIRRQQTKNKK 260

Query: 541 ADREGGMPLEI 573
           AD EGG P++I
Sbjct: 261 ADEEGGQPIDI 271


>ref|XP_004144089.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
           chloroplastic-like [Cucumis sativus]
          Length = 538

 Score =  336 bits (862), Expect = 1e-90
 Identities = 141/191 (73%), Positives = 164/191 (85%)
 Frame = +1

Query: 1   PIAAICDLDKKVPHARKVIGLDIVIWWDRNEGKWKVFDDSCPHRLAPLSEGRIDQWGRLQ 180
           PI  ICDLDK+VPH ++V+G+D+V+WWD+NE  WKVFDD CPHRLAPLSEGRIDQWGRLQ
Sbjct: 81  PIMPICDLDKRVPHGKRVMGIDVVVWWDKNESGWKVFDDLCPHRLAPLSEGRIDQWGRLQ 140

Query: 181 CVYHGWCFNGSGDCKFIPQAPPDGPQIHTSKKACASAYPSFEQNKILWFWPRSEPQYKDI 360
           CVYHGWCFNGSGDCKFIPQAPPDGP +HTSK+AC S YPS  QN ILWFWP S+PQYKDI
Sbjct: 141 CVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVSVYPSVVQNDILWFWPNSDPQYKDI 200

Query: 361 GAKEQPPCVPELDDPSFTSLLMSRDLPYGYEVLIENLMDPAHVPYAHYGILTPSRTPRVK 540
            AK+ PP +PE+DDPS+  L++SRDLPYGYE+L ENLMDPAHVPYAHYG++   +T   K
Sbjct: 201 MAKKTPPYIPEIDDPSYAKLIISRDLPYGYEILTENLMDPAHVPYAHYGLIRRQQTKNKK 260

Query: 541 ADREGGMPLEI 573
           AD EGG P++I
Sbjct: 261 ADEEGGQPIDI 271


>ref|XP_004144087.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
           chloroplastic-like [Cucumis sativus]
          Length = 544

 Score =  333 bits (853), Expect = 2e-89
 Identities = 141/191 (73%), Positives = 163/191 (85%)
 Frame = +1

Query: 1   PIAAICDLDKKVPHARKVIGLDIVIWWDRNEGKWKVFDDSCPHRLAPLSEGRIDQWGRLQ 180
           PI  ICDLDK+VPH + V+G+D+V+WWD+NE  WKVFDD CPHRLAPLSEGRIDQWGRLQ
Sbjct: 87  PIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFDDLCPHRLAPLSEGRIDQWGRLQ 146

Query: 181 CVYHGWCFNGSGDCKFIPQAPPDGPQIHTSKKACASAYPSFEQNKILWFWPRSEPQYKDI 360
           CVYHGWCFNGSGDCKFIPQAPPDGP +HTSK+AC + +PS  QN +LWFWP S+PQYKDI
Sbjct: 147 CVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVFPSIVQNDVLWFWPNSDPQYKDI 206

Query: 361 GAKEQPPCVPELDDPSFTSLLMSRDLPYGYEVLIENLMDPAHVPYAHYGILTPSRTPRVK 540
             K++PP +PELDDPSFT L+ +RDLPYGYE+L ENLMDPAHVPYAHYGI+      R K
Sbjct: 207 MEKKKPPYIPELDDPSFTKLISNRDLPYGYEILTENLMDPAHVPYAHYGIMGRLPKNREK 266

Query: 541 ADREGGMPLEI 573
           ADREGG P++I
Sbjct: 267 ADREGGKPIDI 277


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