BLASTX nr result

ID: Coptis24_contig00021531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021531
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516496.1| 9-cis-epoxycarotenoid dioxygenase, putative ...   167   1e-39
ref|XP_002324228.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-38
emb|CAN66950.1| hypothetical protein VITISV_020097 [Vitis vinifera]   163   1e-38
ref|XP_003633099.1| PREDICTED: LOW QUALITY PROTEIN: carotenoid 9...   161   5e-38
ref|XP_002281310.2| PREDICTED: carotenoid 9,10(9',10')-cleavage ...   161   5e-38

>ref|XP_002516496.1| 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]
           gi|223544316|gb|EEF45837.1| 9-cis-epoxycarotenoid
           dioxygenase, putative [Ricinus communis]
          Length = 577

 Score =  167 bits (422), Expect = 1e-39
 Identities = 72/118 (61%), Positives = 97/118 (82%), Gaps = 5/118 (4%)
 Frame = -3

Query: 350 DLKFSRSIICHDVGVTEKYNIILDSPLTADINRLIKGG-----SKEDHARMGVMPRYGDG 186
           DL+F+R  +CHD+GVTE+YN+ILD  LT DI RL++GG     +KE+++R+G+MPRYGD 
Sbjct: 274 DLRFNRCTLCHDIGVTERYNVILDFALTIDITRLLRGGPLIQYNKEEYSRIGIMPRYGDA 333

Query: 185 NSVRWFEVAPHCTFHIVNCFEDGEEVVVRGCRAQGSVIPGPDFGHNKDEWFSRGLKPL 12
           NS++WF+V P+CTFHI+NCFEDG+EVVV GC+A  S+IPGPD G +K EWFSR  +P+
Sbjct: 334 NSIKWFKVEPNCTFHILNCFEDGDEVVVWGCKALDSIIPGPDKGLDKFEWFSRRFRPI 391


>ref|XP_002324228.1| predicted protein [Populus trichocarpa] gi|222865662|gb|EEF02793.1|
           predicted protein [Populus trichocarpa]
          Length = 589

 Score =  163 bits (413), Expect = 1e-38
 Identities = 73/116 (62%), Positives = 92/116 (79%), Gaps = 5/116 (4%)
 Frame = -3

Query: 350 DLKFSRSIICHDVGVTEKYNIILDSPLTADINRLIKGGS-----KEDHARMGVMPRYGDG 186
           DLKF+RS++ HD+GVT+ YN+I+D PL  DI R+IKGG      +++ AR+GVMPRYG  
Sbjct: 286 DLKFNRSVLNHDIGVTQNYNVIIDHPLIVDITRVIKGGQLMKYEEKETARIGVMPRYGSA 345

Query: 185 NSVRWFEVAPHCTFHIVNCFEDGEEVVVRGCRAQGSVIPGPDFGHNKDEWFSRGLK 18
            SV+WFEV P+CTFHIVNCFED  EVVVRGC+A  S+IPGPD+G +K EWFS+G K
Sbjct: 346 ESVKWFEVEPNCTFHIVNCFEDSNEVVVRGCKAVTSIIPGPDWGQDKFEWFSKGFK 401


>emb|CAN66950.1| hypothetical protein VITISV_020097 [Vitis vinifera]
          Length = 1199

 Score =  163 bits (413), Expect = 1e-38
 Identities = 74/119 (62%), Positives = 93/119 (78%), Gaps = 5/119 (4%)
 Frame = -3

Query: 353  VDLKFSRSIICHDVGVTEKYNIILDSPLTADINRLIKGG-----SKEDHARMGVMPRYGD 189
            VDLKF+R+ + H++GVT+KYN+I+D PLT DINRL+ GG      KE + R+GVMPRYG+
Sbjct: 893  VDLKFNRATLIHEIGVTQKYNVIMDCPLTVDINRLVAGGPLIKYDKEGYTRIGVMPRYGN 952

Query: 188  GNSVRWFEVAPHCTFHIVNCFEDGEEVVVRGCRAQGSVIPGPDFGHNKDEWFSRGLKPL 12
             +SV+WF+V  +CT HI+N FEDG EVVVRGCRA  S+IPGPD G NK EWFS G KP+
Sbjct: 953  ADSVKWFDVEANCTLHILNSFEDGNEVVVRGCRALESIIPGPDHGLNKFEWFSMGFKPI 1011


>ref|XP_003633099.1| PREDICTED: LOW QUALITY PROTEIN: carotenoid 9,10(9',10')-cleavage
           dioxygenase-like [Vitis vinifera]
          Length = 611

 Score =  161 bits (408), Expect = 5e-38
 Identities = 73/119 (61%), Positives = 93/119 (78%), Gaps = 5/119 (4%)
 Frame = -3

Query: 353 VDLKFSRSIICHDVGVTEKYNIILDSPLTADINRLIKGG-----SKEDHARMGVMPRYGD 189
           VDLKF+R  + H++GVT+KYN+I+D PLT D+NRL+ GG      KE +AR+G+MPRYG+
Sbjct: 311 VDLKFNRVTLIHEIGVTQKYNVIMDCPLTVDMNRLVAGGPLIKYDKEGYARIGIMPRYGN 370

Query: 188 GNSVRWFEVAPHCTFHIVNCFEDGEEVVVRGCRAQGSVIPGPDFGHNKDEWFSRGLKPL 12
            +SV+WF+V  +CT HI+N FEDG EVVVRGCRA  S+IPGPD G NK EWFS G KP+
Sbjct: 371 ADSVKWFDVEANCTLHILNSFEDGNEVVVRGCRALESIIPGPDQGLNKFEWFSMGFKPI 429


>ref|XP_002281310.2| PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1-like
           [Vitis vinifera]
          Length = 590

 Score =  161 bits (408), Expect = 5e-38
 Identities = 73/119 (61%), Positives = 93/119 (78%), Gaps = 5/119 (4%)
 Frame = -3

Query: 353 VDLKFSRSIICHDVGVTEKYNIILDSPLTADINRLIKGG-----SKEDHARMGVMPRYGD 189
           VDLKF+R+ + H++GVT+KYN+I+D PLT D+NRL+ GG      KE + R+GVMPRYG+
Sbjct: 291 VDLKFNRATLIHEIGVTQKYNVIMDCPLTVDMNRLVAGGPLIKYDKEGYTRIGVMPRYGN 350

Query: 188 GNSVRWFEVAPHCTFHIVNCFEDGEEVVVRGCRAQGSVIPGPDFGHNKDEWFSRGLKPL 12
            +SV+WF+V  +CT HI+N FEDG EVVVRGCRA  S+IPGPD G NK EWFS G KP+
Sbjct: 351 ADSVKWFDVEANCTLHILNSFEDGNEVVVRGCRALESIIPGPDQGLNKFEWFSMGFKPI 409


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