BLASTX nr result

ID: Coptis24_contig00021523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021523
         (1195 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512243.1| conserved hypothetical protein [Ricinus comm...   389   e-106
ref|XP_002319055.1| predicted protein [Populus trichocarpa] gi|2...   389   e-105
ref|XP_002328510.1| predicted protein [Populus trichocarpa] gi|2...   371   e-100
ref|XP_003536114.1| PREDICTED: uncharacterized protein LOC100777...   330   3e-88
ref|XP_003553754.1| PREDICTED: uncharacterized protein LOC100780...   323   7e-86

>ref|XP_002512243.1| conserved hypothetical protein [Ricinus communis]
            gi|223548204|gb|EEF49695.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 339

 Score =  389 bits (999), Expect = e-106
 Identities = 203/335 (60%), Positives = 244/335 (72%), Gaps = 21/335 (6%)
 Frame = -3

Query: 992  MISSCFRNKNSLTHNSQMPQNLITSIYQTQICNTPTYLTLTWSKSLLSHTLTIQATDSFS 813
            MI +CF + N+L+  SQ+PQ+LIT IYQTQ CN+PTYLTL+WSK+L SH+LT+ A+DSFS
Sbjct: 2    MIPACFSHPNTLSSASQLPQSLITCIYQTQFCNSPTYLTLSWSKTLFSHSLTVFASDSFS 61

Query: 812  ITVSLYPSTFSFFKNRSGSKSMNLNHHHY-RIKLFWDFNCAKFARNSAEPKSCFYLAISH 636
            IT+ LYPSTFSFF+N+ GSKS+ L HHHY RIKL+WDF  A+F  NSAEP SCFY+AI  
Sbjct: 62   ITIPLYPSTFSFFRNKPGSKSICLTHHHYQRIKLYWDFTRAQFTHNSAEPDSCFYIAIIC 121

Query: 635  NACIEFFLGDLEDTALRRSSATVI---SPSSEPTLLSRREHVFGQRHYMTRAQFLGSDHE 465
            NA +EFFLGDL+    RR S+ ++      +EPTLLSRREHVFG + Y +RA+FLGS HE
Sbjct: 122  NARLEFFLGDLQSELTRRVSSGLVLTRQVVAEPTLLSRREHVFGHKSYASRAEFLGSKHE 181

Query: 464  IGIECAGGTLRVKVDGEVGLVVKRLVWKFRGNERIIVGNSAIEFYWDVFDWV----AXXX 297
            IGIEC GG L VKVDGE+ LVVKRL WKFRGNER  VG   +EF+WDVF+WV        
Sbjct: 182  IGIECNGGALIVKVDGEISLVVKRLAWKFRGNERFFVGGMEVEFFWDVFNWVNDSNGNNN 241

Query: 296  XXXGVFMFQVGDGGVWPEMVGMEKRLMKK----------XXXXXXXXXXXXXXXXXSVLQ 147
               GVF+FQVGDGGVWPEMVG+EKRL++K                           SVLQ
Sbjct: 242  HGHGVFIFQVGDGGVWPEMVGLEKRLIRKSLSSSVGQSQTLMPAAMASLSPSPSCSSVLQ 301

Query: 146  WADGSSDGGRTSCASS-TKSCGS--GGFSLLLFAW 51
            WA+ SSD GR+SC+SS T+SCGS  GGFSLLL+AW
Sbjct: 302  WAEESSDCGRSSCSSSTTRSCGSNNGGFSLLLYAW 336


>ref|XP_002319055.1| predicted protein [Populus trichocarpa] gi|222857431|gb|EEE94978.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  389 bits (998), Expect = e-105
 Identities = 203/332 (61%), Positives = 243/332 (73%), Gaps = 18/332 (5%)
 Frame = -3

Query: 992 MISSCFRNKNSLTHNSQMPQNLITSIYQTQICNTPTYLTLTWSKSLLSHTLTIQATDSFS 813
           MI +CF N ++L+  SQ+PQNL+T IYQTQ+CN+PTYLTLTWSKSL SH+LTI A DSFS
Sbjct: 1   MIPACFSNPSTLSSTSQVPQNLVTCIYQTQLCNSPTYLTLTWSKSLFSHSLTIYAADSFS 60

Query: 812 ITVSLYPSTFSFFKNRSGSKSMNLNHHHY-RIKLFWDFNCAKFARNSAEPKSCFYLAISH 636
           IT+SLYPS+FSFF+N+ GSKS+ L HHHY RIKL+WDF  A+F+ NSAEP+S FY+AIS 
Sbjct: 61  ITISLYPSSFSFFRNKPGSKSLYLTHHHYQRIKLYWDFTRAEFSHNSAEPESRFYIAISC 120

Query: 635 NACIEFFLGDLEDTALRRSSATVISP-SSEPTLLSRREHVFGQRHYMTRAQFLGSDHEIG 459
           +A +EFFLGDL     RRS   +      EP LLSRREHVFG++ Y++RA FLGS HEIG
Sbjct: 121 DARLEFFLGDLYSELTRRSGLVMARQLGHEPALLSRREHVFGRKSYVSRANFLGSKHEIG 180

Query: 458 IECAGGTLRVKVDGEVGLVVKRLVWKFRGNERIIVGNSAIEFYWDVFDWV------AXXX 297
           IEC+GG L VKVDGE+ LV+KRL WKFRGNERI VG   +EF+WDVF+WV          
Sbjct: 181 IECSGGMLVVKVDGEISLVIKRLAWKFRGNERIYVGGLEVEFFWDVFNWVNNNNNGLGGA 240

Query: 296 XXXGVFMFQVGDGGVWPEMVGMEKRLMKK-------XXXXXXXXXXXXXXXXXSVLQWAD 138
              GVF+FQVGDGGVWP+M G EKRLM+K                        SVLQWA+
Sbjct: 241 HGHGVFIFQVGDGGVWPQMAGPEKRLMRKSMSMVGPTSTPPALSLSSPSPSCSSVLQWAE 300

Query: 137 GSSDGGRTSCASST-KSCGS--GGFSLLLFAW 51
            SSD GR+SC+SST +SCGS  GGFSLLL+AW
Sbjct: 301 ESSDCGRSSCSSSTSRSCGSNIGGFSLLLYAW 332


>ref|XP_002328510.1| predicted protein [Populus trichocarpa]
            gi|224131326|ref|XP_002328511.1| predicted protein
            [Populus trichocarpa] gi|222838225|gb|EEE76590.1|
            predicted protein [Populus trichocarpa]
            gi|222838226|gb|EEE76591.1| predicted protein [Populus
            trichocarpa]
          Length = 340

 Score =  371 bits (953), Expect = e-100
 Identities = 198/337 (58%), Positives = 234/337 (69%), Gaps = 23/337 (6%)
 Frame = -3

Query: 992  MISSCFRNKNSLTHNSQMPQNLITSIYQTQICNTPTYLTLTWSKSLLSHTLTIQATDSFS 813
            MI +CF N ++L+  SQ+PQNLIT IYQTQ+ N+PTYLTL WSK+L SH+LTI A DSFS
Sbjct: 1    MIPACFSNPSTLSSASQVPQNLITCIYQTQLGNSPTYLTLAWSKTLFSHSLTIYAADSFS 60

Query: 812  ITVSLYPSTFSFFKNRSGSKSMNLNHHHYR-IKLFWDFNCAKFARNSAEPKSCFYLAISH 636
            IT+SLYPS FS F+N+ GSKS+ L HHHY+ IKL+WDF  A+F  NSAEP+S FY+AIS 
Sbjct: 61   ITISLYPSAFSLFRNKPGSKSIYLTHHHYKKIKLYWDFTRAEFTHNSAEPESRFYIAISC 120

Query: 635  NACIEFFLGDLEDTALRRSSATVISPSSEPTLLSRREHVFGQRHYMTRAQFLGSDHEIGI 456
            +A +EF LGDL     RRS   +     EP LLSRREHVFG R Y++RA FLGS HEI I
Sbjct: 121  DARLEFLLGDLCPELTRRSGLVIARQLGEPALLSRREHVFGLRSYVSRASFLGSKHEIEI 180

Query: 455  ECAGGTLRVKVDGEVGLVVKRLVWKFRGNERIIVGNSAIEFYWDVFDWV----------- 309
            EC GG L VKVDGE+ LV+KRL WKFRGNERI VG   +EF+WDVF+WV           
Sbjct: 181  ECGGGVLVVKVDGEISLVIKRLAWKFRGNERIHVGGLEVEFFWDVFNWVNNNNNCNNYNS 240

Query: 308  -AXXXXXXGVFMFQVGDGGVWPEMVGMEKRLMKK-------XXXXXXXXXXXXXXXXXSV 153
                    GVF+FQVGDGGVWPEMVG EKRL++K                        SV
Sbjct: 241  LGSAAKGHGVFIFQVGDGGVWPEMVGPEKRLIRKSMSMAGPTSTPRPMSLSSPSPSCSSV 300

Query: 152  LQWADGSSDGGRTSCASS-TKSCG--SGGFSLLLFAW 51
            LQWA+ S D GR+SC+SS T+SCG  SGGFSLLL+AW
Sbjct: 301  LQWAEESGDCGRSSCSSSTTRSCGSNSGGFSLLLYAW 337


>ref|XP_003536114.1| PREDICTED: uncharacterized protein LOC100777551 [Glycine max]
          Length = 331

 Score =  330 bits (847), Expect = 3e-88
 Identities = 186/331 (56%), Positives = 226/331 (68%), Gaps = 17/331 (5%)
 Frame = -3

Query: 992 MISSCFRNKNSLTHNS--QMPQNLITSIYQTQICNTPTYLTLTWSKSLLSHTLTIQATDS 819
           MI +CF   N+ + +S  Q+PQNL+T IYQTQ+CN+ TYLTLTW ++LLSH+LTI A  +
Sbjct: 1   MIPACFSQPNTPSSSSITQVPQNLVTCIYQTQLCNSSTYLTLTWCRTLLSHSLTIYAPHT 60

Query: 818 FSITVSLYPSTFSFFKNRSGSKSMNLNHHHYR---IKLFWDFNCAKFA-RNSAEPKSCFY 651
           FSIT+ L PSTFSFF+ R  SKS+ L   H R   IKL WDF+   F+ RNSAEP+SCFY
Sbjct: 61  FSITIPLNPSTFSFFRTRPESKSIYLTRPHKRSQKIKLHWDFSETLFSTRNSAEPESCFY 120

Query: 650 LAISHNACIEFFLGDLEDTALRRSSATVISPSSEPTLLSRREHVFGQRHYMTRAQFLGSD 471
           LAI  N  +EFFLGDL    L           S+ TL+SRREHVFG + Y++R +F+GS 
Sbjct: 121 LAICCNGRVEFFLGDL---VLGLPVQLSTHQPSDQTLVSRREHVFGSKSYVSRGEFMGSK 177

Query: 470 HEIGIE-CAGGTLRVKVDGEVGLVVKRLVWKFRGNERIIVGNSAIEFYWDVFDWV----- 309
           HE+ IE C+G  LRVK DG+V LVVKRL WKFRGNE+I +    +EFYWDV +WV     
Sbjct: 178 HELEIELCSGEELRVKADGQVCLVVKRLAWKFRGNEKIFIDGVEVEFYWDVLNWVVNSED 237

Query: 308 AXXXXXXGVFMFQVGDGG-VWPEMVGMEKRLMKK--XXXXXXXXXXXXXXXXXSVLQWAD 138
                  GVF+FQVGDGG VWPEMVG EK+LMKK                   SVLQWA+
Sbjct: 238 GNGNNGHGVFVFQVGDGGAVWPEMVGPEKKLMKKRLVGPTMAPSIFRTSPSSSSVLQWAE 297

Query: 137 GSSDGGRTSCASSTKSCGS--GGFSLLLFAW 51
            SSDGGR+SC+SST+SCGS  GGFSLLL+AW
Sbjct: 298 ESSDGGRSSCSSSTRSCGSSNGGFSLLLYAW 328


>ref|XP_003553754.1| PREDICTED: uncharacterized protein LOC100780249 [Glycine max]
          Length = 312

 Score =  323 bits (827), Expect = 7e-86
 Identities = 177/325 (54%), Positives = 222/325 (68%), Gaps = 11/325 (3%)
 Frame = -3

Query: 992 MISSCFRNKNS-----LTHNSQMPQNLITSIYQTQICNTPTYLTLTWSKSLLSHTLTIQA 828
           MIS CF   N+     ++++SQ+PQN++T  Y TQ+CN+PTYLTL+WS++L SH+LTI A
Sbjct: 1   MISGCFSQPNTPSSSNISYSSQVPQNVVTCTYLTQLCNSPTYLTLSWSRTLFSHSLTISA 60

Query: 827 TDSFSITVSLYPSTFSFFKNRSGSKSMNLNHHHYRIKLFWDFNCAKFARNSAEPKSCFYL 648
           TD FSIT+SL  STF FF+ R GSKS+N    + +IKL W+F  A+F +NSAEP+S FYL
Sbjct: 61  TDIFSITISLNSSTF-FFRTRHGSKSIN----NRKIKLHWNFTRAEFIQNSAEPESRFYL 115

Query: 647 AISHNACIEFFLGDLEDTALRRSSATVISPSS--EPTLLSRREHVFGQRHYMTRAQFLGS 474
           AISHN  ++FFLGDL     RR     +  ++  +P L+SRREHVFG+R Y++RA F+GS
Sbjct: 116 AISHNGKLQFFLGDLVRDLTRRHKKLDVKANNVVDPVLVSRREHVFGRRCYVSRAVFMGS 175

Query: 473 DHEIGIECAGGTLRVKVDGEVGLVVKRLVWKFRGNERIIVGNSAIEFYWDVFDWVA--XX 300
            H I IEC GG L VKVDGE  LVVKRL WKFRG E+I +    +EFYWDV  WV     
Sbjct: 176 KHVIEIECGGGVLGVKVDGETRLVVKRLAWKFRGYEKIFIDGVEVEFYWDVLSWVVNRDS 235

Query: 299 XXXXGVFMFQVGDGGVWPEMVGMEKRLMKKXXXXXXXXXXXXXXXXXSVLQWADGSSDGG 120
               GVF+FQVGDG VWPEMVG EK+LM K                 SVLQWA+ +S+ G
Sbjct: 236 NNGHGVFVFQVGDGTVWPEMVGAEKKLMNK-----------SVSSASSVLQWAEETSECG 284

Query: 119 RTSCASSTKSCGSG--GFSLLLFAW 51
           RTS +SSTK  G+   GFSLLL+AW
Sbjct: 285 RTSSSSSTKFSGTNATGFSLLLYAW 309


Top