BLASTX nr result

ID: Coptis24_contig00021522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021522
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69096.1| hypothetical protein VITISV_025437 [Vitis vinifera]   124   8e-27
emb|CAN80971.1| hypothetical protein VITISV_043374 [Vitis vinifera]   117   7e-25
emb|CAN82949.1| hypothetical protein VITISV_018262 [Vitis vinifera]   117   7e-25
emb|CAN77156.1| hypothetical protein VITISV_021655 [Vitis vinifera]   115   4e-24
gb|AAO73521.1| gag-pol polyprotein [Glycine max]                      114   8e-24

>emb|CAN69096.1| hypothetical protein VITISV_025437 [Vitis vinifera]
          Length = 992

 Score =  124 bits (311), Expect = 8e-27
 Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 1/128 (0%)
 Frame = -2

Query: 384 QLKCNVAVTVFHASRKST*WYLDSGCSHHMTGDSTKFHNLIPFKGGHVTFGDGSQSQVIG 205
           +LKC V  T   A    + WYLDSGCSHHMTG+ + F +   F GG+VTFGDG+ + V G
Sbjct: 39  ELKCFVVHTALRAIESHS-WYLDSGCSHHMTGNKSLFTSFTEFDGGNVTFGDGNMAGVKG 97

Query: 204 KGTINGLGLPTDQQVL-VKGWKANLISISQLCDNGHIVSFQKDKCIISNSSGQCVITGTR 28
           KGTI    +P  ++VL V+G KANLISISQ+C+N   V F ++ C + + +  CV+ G R
Sbjct: 98  KGTICAPNIPNLEEVLYVEGLKANLISISQMCENEFNVQFSQNLCKVFDLNDVCVMIGLR 157

Query: 27  TADNCYAI 4
           T DNCY +
Sbjct: 158 TCDNCYVV 165


>emb|CAN80971.1| hypothetical protein VITISV_043374 [Vitis vinifera]
          Length = 324

 Score =  117 bits (294), Expect = 7e-25
 Identities = 57/109 (52%), Positives = 77/109 (70%), Gaps = 1/109 (0%)
 Frame = -2

Query: 327 WYLDSGCSHHMTGDSTKFHNLIPFKGGHVTFGDGSQSQVIGKGTINGLGLPTDQQVL-VK 151
           WYL+SGCSHHMTG+ + F + I F GG+VTFGDG+ ++V GKGTI    +P  ++VL V+
Sbjct: 95  WYLNSGCSHHMTGNKSLFTSFIEFDGGNVTFGDGNVAKVKGKGTICAPNIPNLEEVLYVE 154

Query: 150 GWKANLISISQLCDNGHIVSFQKDKCIISNSSGQCVITGTRTADNCYAI 4
           G KANLISISQ C+N   V F ++ C + + +  CV+ G RT DNCY +
Sbjct: 155 GLKANLISISQKCENEINVQFSQNLCKVFDLNDACVMIGLRTCDNCYVV 203


>emb|CAN82949.1| hypothetical protein VITISV_018262 [Vitis vinifera]
          Length = 724

 Score =  117 bits (294), Expect = 7e-25
 Identities = 61/128 (47%), Positives = 82/128 (64%), Gaps = 1/128 (0%)
 Frame = -2

Query: 384 QLKCNVAVTVFHASRKST*WYLDSGCSHHMTGDSTKFHNLIPFKGGHVTFGDGSQSQVIG 205
           +LKC V  T F AS   + WYLDSGCSHHMTG  + F +   F GG+VTFGDG+ ++V  
Sbjct: 476 ELKCFVVHTTFRASESHS-WYLDSGCSHHMTGIKSLFTSFTEFDGGNVTFGDGNVARVKS 534

Query: 204 KGTINGLGLPTDQQVL-VKGWKANLISISQLCDNGHIVSFQKDKCIISNSSGQCVITGTR 28
           K TI    +P  ++VL V+G KANLISI Q+C+N   V F ++ C + + +  CV+   R
Sbjct: 535 KCTICAPNIPNLEEVLYVEGLKANLISIIQMCENEFNVQFSQNLCKVFDLNDACVMISLR 594

Query: 27  TADNCYAI 4
           T DNCY +
Sbjct: 595 TCDNCYVV 602


>emb|CAN77156.1| hypothetical protein VITISV_021655 [Vitis vinifera]
          Length = 474

 Score =  115 bits (288), Expect = 4e-24
 Identities = 61/128 (47%), Positives = 82/128 (64%), Gaps = 1/128 (0%)
 Frame = -2

Query: 384 QLKCNVAVTVFHASRKST*WYLDSGCSHHMTGDSTKFHNLIPFKGGHVTFGDGSQSQVIG 205
           +LKC +      AS     WYLDSGCSHHMTG+ + F + I F GG+VTF  G+ ++V  
Sbjct: 280 ELKCLIXHIALRASETHL-WYLDSGCSHHMTGNKSLFTSFIEFNGGNVTFRHGNVAKVKD 338

Query: 204 KGTINGLGLPTDQQVL-VKGWKANLISISQLCDNGHIVSFQKDKCIISNSSGQCVITGTR 28
           KGTI  L +P  ++VL V+G K NLISISQLC+N   V F ++ C + + +  CV+ G R
Sbjct: 339 KGTICVLDIPHLEKVLYVEGLKTNLISISQLCENEFNVQFSQNFCKVFDLNDACVMIGLR 398

Query: 27  TADNCYAI 4
           T DNCY +
Sbjct: 399 TCDNCYIV 406


>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
          Length = 1574

 Score =  114 bits (285), Expect = 8e-24
 Identities = 60/121 (49%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
 Frame = -2

Query: 369 VAVTVFHASRKST*WYLDSGCSHHMTGDSTKFHNLIPFKGGHVTFGDGSQSQVIGKGTIN 190
           V  T   AS K   WYLDSGCS HMTG      N+ P    +VTFGDGS+ ++IG G + 
Sbjct: 547 VVHTSLRASAKED-WYLDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDGSKGKIIGMGKLV 605

Query: 189 GLGLPTDQQVL-VKGWKANLISISQLCDNGHIVSFQKDKCIISNSSGQCVITGTRTADNC 13
             GLP+  +VL VKG  ANLISISQLCD G  V+F K +C+++N   + ++ G+R+ DNC
Sbjct: 606 HDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNC 665

Query: 12  Y 10
           Y
Sbjct: 666 Y 666


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