BLASTX nr result
ID: Coptis24_contig00021513
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021513 (416 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera] 141 5e-32 emb|CAN73484.1| hypothetical protein VITISV_029448 [Vitis vinifera] 118 6e-25 emb|CAN84036.1| hypothetical protein VITISV_024166 [Vitis vinifera] 115 3e-24 gb|AAZ41811.1| 01P13-1 [Brassica rapa subsp. pekinensis] 114 6e-24 gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum] 113 2e-23 >emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera] Length = 1355 Score = 141 bits (356), Expect = 5e-32 Identities = 72/136 (52%), Positives = 92/136 (67%), Gaps = 1/136 (0%) Frame = +1 Query: 1 VASRF*THGVLTAAYLINSLPSRVLGFKSPLEVLKSRLLDLSHLRVFGCVCYMHQQAI-H 177 V F ++GVLTA YLIN LPSRVL F PLEVL+ + DLSHL+VFGC C++H A Sbjct: 673 VPKHFWSYGVLTATYLINRLPSRVLDFLCPLEVLQQKKPDLSHLKVFGCTCFVHLSATQR 732 Query: 178 QDKFDAWATRCVFVGYSTTQKGYICYNPATRKLVVSRDVRFMESEAFFHDSTVPGNRSQG 357 +DK D A +CVF+GYS TQKGY CY+ ++L VSRDV+F+E+ F N +QG Sbjct: 733 RDKLDPRAVKCVFLGYSQTQKGYRCYDTTAKRLFVSRDVQFVETSPIFE------NSNQG 786 Query: 358 ECLADLAPLPAVTADV 405 E L+D PLP V A++ Sbjct: 787 EILSDFVPLPEVAANI 802 >emb|CAN73484.1| hypothetical protein VITISV_029448 [Vitis vinifera] Length = 835 Score = 118 bits (295), Expect = 6e-25 Identities = 60/116 (51%), Positives = 77/116 (66%), Gaps = 5/116 (4%) Frame = +1 Query: 28 VLTAAYLINSLPSRVLGFKSPLEVLKS-----RLLDLSHLRVFGCVCYMHQQAIHQDKFD 192 VLTA Y+IN +PSRVL KSP+E+LKS R + RVFGC ++H H+DK D Sbjct: 220 VLTATYMINRIPSRVLDNKSPVEILKSFYPHFRTSNGLTPRVFGCTAFVHVHXQHRDKLD 279 Query: 193 AWATRCVFVGYSTTQKGYICYNPATRKLVVSRDVRFMESEAFFHDSTVPGNRSQGE 360 A +C F GYS+TQKGY CYNP+TRK +S DV F+E++ FFH S++ G S E Sbjct: 280 PRAIKCXFXGYSSTQKGYKCYNPSTRKFYISADVTFIENKPFFHKSSLQGEISMME 335 >emb|CAN84036.1| hypothetical protein VITISV_024166 [Vitis vinifera] Length = 1337 Score = 115 bits (289), Expect = 3e-24 Identities = 58/116 (50%), Positives = 77/116 (66%), Gaps = 5/116 (4%) Frame = +1 Query: 28 VLTAAYLINSLPSRVLGFKSPLEVLKS-----RLLDLSHLRVFGCVCYMHQQAIHQDKFD 192 VLTA Y+IN +PSRVL KSP+E+LKS R + RVFGC ++H + H+DK D Sbjct: 564 VLTATYMINRIPSRVLDNKSPVEILKSFYPHFRTSNGITPRVFGCTAFVHVHSQHRDKLD 623 Query: 193 AWATRCVFVGYSTTQKGYICYNPATRKLVVSRDVRFMESEAFFHDSTVPGNRSQGE 360 +CVF+GYS+T+KGY CYNP+ RK +S DV F E++ FFH S++ G S E Sbjct: 624 PRVIKCVFLGYSSTKKGYKCYNPSARKFYISADVTFTENKPFFHKSSLQGGISMME 679 >gb|AAZ41811.1| 01P13-1 [Brassica rapa subsp. pekinensis] Length = 1545 Score = 114 bits (286), Expect = 6e-24 Identities = 52/111 (46%), Positives = 76/111 (68%) Frame = +1 Query: 1 VASRF*THGVLTAAYLINSLPSRVLGFKSPLEVLKSRLLDLSHLRVFGCVCYMHQQAIHQ 180 V R+ + V+TA YLIN +P+R+L +SP EVL L HLR FGCVCY+ + Sbjct: 709 VPKRYWSDAVMTACYLINRIPTRILADQSPFEVLNKSRPVLDHLRTFGCVCYVLVPGEQR 768 Query: 181 DKFDAWATRCVFVGYSTTQKGYICYNPATRKLVVSRDVRFMESEAFFHDST 333 +K +A +T+ + +GYST+QKGY CY+P R+++VSRDVRFME + ++ + T Sbjct: 769 NKLEAKSTKAMMIGYSTSQKGYKCYDPTARRVLVSRDVRFMEDKGYYDEQT 819 >gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum] Length = 1347 Score = 113 bits (282), Expect = 2e-23 Identities = 57/126 (45%), Positives = 81/126 (64%) Frame = +1 Query: 1 VASRF*THGVLTAAYLINSLPSRVLGFKSPLEVLKSRLLDLSHLRVFGCVCYMHQQAIHQ 180 V RF + VLTA +LIN +PS +P+E+L ++ DLS+LRVFGC C++H A + Sbjct: 594 VKKRFWSDAVLTACHLINRIPSATTSGLAPIEILLNKKPDLSYLRVFGCCCFVHVPAGKR 653 Query: 181 DKFDAWATRCVFVGYSTTQKGYICYNPATRKLVVSRDVRFMESEAFFHDSTVPGNRSQGE 360 DK D A +C+F+GYS QKGY C++P + + +SRDVRF+E +AFF + SQGE Sbjct: 654 DKLDKRAVKCIFLGYSRNQKGYRCFDPESGQRFISRDVRFIEDQAFFCND--KEYNSQGE 711 Query: 361 CLADLA 378 L+ Sbjct: 712 LFDQLS 717