BLASTX nr result

ID: Coptis24_contig00021513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021513
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]   141   5e-32
emb|CAN73484.1| hypothetical protein VITISV_029448 [Vitis vinifera]   118   6e-25
emb|CAN84036.1| hypothetical protein VITISV_024166 [Vitis vinifera]   115   3e-24
gb|AAZ41811.1| 01P13-1 [Brassica rapa subsp. pekinensis]              114   6e-24
gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum]       113   2e-23

>emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]
          Length = 1355

 Score =  141 bits (356), Expect = 5e-32
 Identities = 72/136 (52%), Positives = 92/136 (67%), Gaps = 1/136 (0%)
 Frame = +1

Query: 1    VASRF*THGVLTAAYLINSLPSRVLGFKSPLEVLKSRLLDLSHLRVFGCVCYMHQQAI-H 177
            V   F ++GVLTA YLIN LPSRVL F  PLEVL+ +  DLSHL+VFGC C++H  A   
Sbjct: 673  VPKHFWSYGVLTATYLINRLPSRVLDFLCPLEVLQQKKPDLSHLKVFGCTCFVHLSATQR 732

Query: 178  QDKFDAWATRCVFVGYSTTQKGYICYNPATRKLVVSRDVRFMESEAFFHDSTVPGNRSQG 357
            +DK D  A +CVF+GYS TQKGY CY+   ++L VSRDV+F+E+   F       N +QG
Sbjct: 733  RDKLDPRAVKCVFLGYSQTQKGYRCYDTTAKRLFVSRDVQFVETSPIFE------NSNQG 786

Query: 358  ECLADLAPLPAVTADV 405
            E L+D  PLP V A++
Sbjct: 787  EILSDFVPLPEVAANI 802


>emb|CAN73484.1| hypothetical protein VITISV_029448 [Vitis vinifera]
          Length = 835

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/116 (51%), Positives = 77/116 (66%), Gaps = 5/116 (4%)
 Frame = +1

Query: 28  VLTAAYLINSLPSRVLGFKSPLEVLKS-----RLLDLSHLRVFGCVCYMHQQAIHQDKFD 192
           VLTA Y+IN +PSRVL  KSP+E+LKS     R  +    RVFGC  ++H    H+DK D
Sbjct: 220 VLTATYMINRIPSRVLDNKSPVEILKSFYPHFRTSNGLTPRVFGCTAFVHVHXQHRDKLD 279

Query: 193 AWATRCVFVGYSTTQKGYICYNPATRKLVVSRDVRFMESEAFFHDSTVPGNRSQGE 360
             A +C F GYS+TQKGY CYNP+TRK  +S DV F+E++ FFH S++ G  S  E
Sbjct: 280 PRAIKCXFXGYSSTQKGYKCYNPSTRKFYISADVTFIENKPFFHKSSLQGEISMME 335


>emb|CAN84036.1| hypothetical protein VITISV_024166 [Vitis vinifera]
          Length = 1337

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/116 (50%), Positives = 77/116 (66%), Gaps = 5/116 (4%)
 Frame = +1

Query: 28  VLTAAYLINSLPSRVLGFKSPLEVLKS-----RLLDLSHLRVFGCVCYMHQQAIHQDKFD 192
           VLTA Y+IN +PSRVL  KSP+E+LKS     R  +    RVFGC  ++H  + H+DK D
Sbjct: 564 VLTATYMINRIPSRVLDNKSPVEILKSFYPHFRTSNGITPRVFGCTAFVHVHSQHRDKLD 623

Query: 193 AWATRCVFVGYSTTQKGYICYNPATRKLVVSRDVRFMESEAFFHDSTVPGNRSQGE 360
               +CVF+GYS+T+KGY CYNP+ RK  +S DV F E++ FFH S++ G  S  E
Sbjct: 624 PRVIKCVFLGYSSTKKGYKCYNPSARKFYISADVTFTENKPFFHKSSLQGGISMME 679


>gb|AAZ41811.1| 01P13-1 [Brassica rapa subsp. pekinensis]
          Length = 1545

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/111 (46%), Positives = 76/111 (68%)
 Frame = +1

Query: 1    VASRF*THGVLTAAYLINSLPSRVLGFKSPLEVLKSRLLDLSHLRVFGCVCYMHQQAIHQ 180
            V  R+ +  V+TA YLIN +P+R+L  +SP EVL      L HLR FGCVCY+      +
Sbjct: 709  VPKRYWSDAVMTACYLINRIPTRILADQSPFEVLNKSRPVLDHLRTFGCVCYVLVPGEQR 768

Query: 181  DKFDAWATRCVFVGYSTTQKGYICYNPATRKLVVSRDVRFMESEAFFHDST 333
            +K +A +T+ + +GYST+QKGY CY+P  R+++VSRDVRFME + ++ + T
Sbjct: 769  NKLEAKSTKAMMIGYSTSQKGYKCYDPTARRVLVSRDVRFMEDKGYYDEQT 819


>gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum]
          Length = 1347

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/126 (45%), Positives = 81/126 (64%)
 Frame = +1

Query: 1   VASRF*THGVLTAAYLINSLPSRVLGFKSPLEVLKSRLLDLSHLRVFGCVCYMHQQAIHQ 180
           V  RF +  VLTA +LIN +PS      +P+E+L ++  DLS+LRVFGC C++H  A  +
Sbjct: 594 VKKRFWSDAVLTACHLINRIPSATTSGLAPIEILLNKKPDLSYLRVFGCCCFVHVPAGKR 653

Query: 181 DKFDAWATRCVFVGYSTTQKGYICYNPATRKLVVSRDVRFMESEAFFHDSTVPGNRSQGE 360
           DK D  A +C+F+GYS  QKGY C++P + +  +SRDVRF+E +AFF +       SQGE
Sbjct: 654 DKLDKRAVKCIFLGYSRNQKGYRCFDPESGQRFISRDVRFIEDQAFFCND--KEYNSQGE 711

Query: 361 CLADLA 378
               L+
Sbjct: 712 LFDQLS 717


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