BLASTX nr result

ID: Coptis24_contig00021503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021503
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279111.1| PREDICTED: uncharacterized protein LOC100244...   119   6e-44
emb|CBI26160.3| unnamed protein product [Vitis vinifera]              111   2e-42
ref|XP_002312728.1| predicted protein [Populus trichocarpa] gi|2...    90   4e-33
ref|XP_004134462.1| PREDICTED: BSD domain-containing protein 1-l...    94   2e-32
emb|CBI32321.3| unnamed protein product [Vitis vinifera]               81   6e-30

>ref|XP_002279111.1| PREDICTED: uncharacterized protein LOC100244278 [Vitis vinifera]
          Length = 426

 Score =  119 bits (298), Expect(2) = 6e-44
 Identities = 82/203 (40%), Positives = 105/203 (51%), Gaps = 21/203 (10%)
 Frame = +3

Query: 453 KVVPSLVDREVFWERYFYRVFKLKQVEDASRVL*NERLVGXXXXXXXXXXXXXXXXXXXX 632
           KVVP++VD + FW RYFYR+ KLK VEDA   L N  + G                    
Sbjct: 224 KVVPNVVDHDTFWSRYFYRIHKLKLVEDARVNLVNRAIAGDEEEDLSWDIDDDEDDEEKS 283

Query: 633 XNQRLKRRM*WRISK--------LRN*RL------GMVAQSVYNEKV-VEGEEKASPSED 767
               LKR +    S         + N +L      G+V +   +E+V  +G   +  SE 
Sbjct: 284 NGSELKRELNKENSSESVMEQKFVENSQLEESLKKGVVHEQAPDERVNSDGRSDSDKSET 343

Query: 768 GEALKSSE-----LPVVSLVSKEEEDEDLGWDEIEDIEGNHDEKKVSVGGR-LNRSDLRK 929
                 SE     + +VS      E+EDLGWDEIEDI G+ DE KV V G   N++DLRK
Sbjct: 344 KSEKMISEGRTDSVSIVSSPPSLPEEEDLGWDEIEDI-GSIDENKVGVSGSPANKADLRK 402

Query: 930 RLSGADEEEDLSWDIEDDDEPVK 998
           RLS A+E+EDL+WDIEDDDEP K
Sbjct: 403 RLSAAEEDEDLTWDIEDDDEPAK 425



 Score = 85.9 bits (211), Expect(2) = 6e-44
 Identities = 66/220 (30%), Positives = 101/220 (45%), Gaps = 67/220 (30%)
 Frame = +1

Query: 1   NFFKSVYSDD----KDXXXXXXXXXXXXXXXXXXXXXXXXRWNFNTLIKSISTKSDTLIS 168
           NFFKSV++DD     D                         W+F  LIK++++KS+++I 
Sbjct: 2   NFFKSVFADDPEPASDPPHSAAHPDPGDDEPNHRNPNPNAAWSFGGLIKTLASKSESVIE 61

Query: 169 TYKRDLVEFQTGLKKET--------QAITQLPSSLE----------------------SV 258
           +Y+RD+ EF TGLKKET        +A+  LP+SLE                      SV
Sbjct: 62  SYRRDIEEFGTGLKKETAVIRDVASRAVKDLPASLEVGASVAQDSLESVGQAIDDIGSSV 121

Query: 259 WRGTSQII-------------------------LNTENNNILKYNRF----RAIRNDTSA 351
           WRGT++II                         L++++ +  +Y+RF    RAI+ D + 
Sbjct: 122 WRGTAEIITHGRDALLAAEEHDIDSPSDSSSQQLSSQSLSSQRYSRFDVQLRAIQCDENT 181

Query: 352 YTDDVD----FMKWKLGFQVYENEEEAESLVGENGVMRKL 459
           Y ++ +    F KWKLGF + +   E E+L   NGVM ++
Sbjct: 182 YREEPEDLDGFSKWKLGFVLEDKSAEIENLSEANGVMGEI 221


>emb|CBI26160.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  111 bits (277), Expect(2) = 2e-42
 Identities = 74/186 (39%), Positives = 99/186 (53%), Gaps = 4/186 (2%)
 Frame = +3

Query: 453 KVVPSLVDREVFWERYFYRVFKLKQVEDASRVL*NERLVGXXXXXXXXXXXXXXXXXXXX 632
           KVVP++VD + FW RYFYR+ KLK VEDA   L N  + G                    
Sbjct: 195 KVVPNVVDHDTFWSRYFYRIHKLKLVEDARVNLVNRAIAGDE------------------ 236

Query: 633 XNQRLKRRM*WRISKLRN*RLGMVAQSVYNEKVVEGEEKASPSEDGEALKSSELPVVSLV 812
                +  + W I    +      +  V ++   + ++  + SE  + +       VS+V
Sbjct: 237 -----EEDLSWDIDDDEDDE--EKSNGVNSDGRSDSDKSETKSE--KMISEGRTDSVSIV 287

Query: 813 SKEE---EDEDLGWDEIEDIEGNHDEKKVSVGGR-LNRSDLRKRLSGADEEEDLSWDIED 980
           S      E+EDLGWDEIEDI G+ DE KV V G   N++DLRKRLS A+E+EDL+WDIED
Sbjct: 288 SSPPSLPEEEDLGWDEIEDI-GSIDENKVGVSGSPANKADLRKRLSAAEEDEDLTWDIED 346

Query: 981 DDEPVK 998
           DDEP K
Sbjct: 347 DDEPAK 352



 Score = 89.0 bits (219), Expect(2) = 2e-42
 Identities = 61/191 (31%), Positives = 94/191 (49%), Gaps = 38/191 (19%)
 Frame = +1

Query: 1   NFFKSVYSDD----KDXXXXXXXXXXXXXXXXXXXXXXXXRWNFNTLIKSISTKSDTLIS 168
           NFFKSV++DD     D                         W+F  LIK++++KS+++I 
Sbjct: 2   NFFKSVFADDPEPASDPPHSAAHPDPGDDEPNHRNPNPNAAWSFGGLIKTLASKSESVIE 61

Query: 169 TYKRDLVEFQTGLKKETQAITQLPSSL-ESVWRGTSQII--------------------- 282
           +Y+RD+ EF TGLKKET  I      +  SVWRGT++II                     
Sbjct: 62  SYRRDIEEFGTGLKKETAVIRDAIDDIGSSVWRGTAEIITHGRDALLAAEEHDIDSPSDS 121

Query: 283 ----LNTENNNILKYNRF----RAIRNDTSAYTDDVD----FMKWKLGFQVYENEEEAES 426
               L++++ +  +Y+RF    RAI+ D + Y ++ +    F KWKLGF + +   E E+
Sbjct: 122 SSQQLSSQSLSSQRYSRFDVQLRAIQCDENTYREEPEDLDGFSKWKLGFVLEDKSAEIEN 181

Query: 427 LVGENGVMRKL 459
           L   NGVM ++
Sbjct: 182 LSEANGVMGEI 192


>ref|XP_002312728.1| predicted protein [Populus trichocarpa] gi|222852548|gb|EEE90095.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score = 89.7 bits (221), Expect(2) = 4e-33
 Identities = 64/183 (34%), Positives = 87/183 (47%), Gaps = 4/183 (2%)
 Frame = +3

Query: 453 KVVPSLVDREVFWERYFYRVFKLKQVEDASRVL*NERLVGXXXXXXXXXXXXXXXXXXXX 632
           +VVP+ VD E FW R+FYR+FKL Q E+A  +L    + G                    
Sbjct: 216 EVVPNRVDDESFWSRFFYRMFKLNQAEEARALLVKRAISGDE------------------ 257

Query: 633 XNQRLKRRM*WRISKLRN*RLGMVAQSVYNEKVVEGEEKASPSEDGEALKSSELPVVSLV 812
                +  + W                 +++   EG+   S    G     S++ VVS  
Sbjct: 258 -----EEDLSWD----------------FDDDKEEGDGLLS---KGSESTDSDVSVVS-- 291

Query: 813 SKEEEDEDLGWDEIEDIEGNHDEKKVSVGGR----LNRSDLRKRLSGADEEEDLSWDIED 980
           SK   +EDL WDEIEDI  N + K  +VG R     +R DL K+LS A+EEED SWDIED
Sbjct: 292 SKSLAEEDLEWDEIEDIGSNDESKGEAVGSRKSAGTSRVDLHKQLSAAEEEEDFSWDIED 351

Query: 981 DDE 989
           +D+
Sbjct: 352 EDD 354



 Score = 79.3 bits (194), Expect(2) = 4e-33
 Identities = 62/212 (29%), Positives = 95/212 (44%), Gaps = 59/212 (27%)
 Frame = +1

Query: 1   NFFKSVYSDDKDXXXXXXXXXXXXXXXXXXXXXXXXRWNFNTLIKSISTKSDTLISTYKR 180
           NFFK+V++DD                           W+F +LI++++TKS+++I  YK+
Sbjct: 2   NFFKAVFADDPTPPDSPKSPPPSSENPNPDPPTQNSTWSFGSLIQTLATKSESVIEIYKK 61

Query: 181 DLVEFQTGLKKE--------TQAITQLPSSLE-------------------SVWRGTSQI 279
           DL EF +GLK E        ++A+  LP+S E                   S+W+ T+QI
Sbjct: 62  DLEEFGSGLKNESTIIRDVASRAVHDLPASFEASAAVAQESFGQAIGGIGSSMWKSTAQI 121

Query: 280 I--------------------LNTENNNI---LKYNRF----RAIRNDTSAY----TDDV 366
           I                     NT+ N      +Y+RF    RA++ D   Y     D  
Sbjct: 122 ISQGRDSILASDHDHDRDLLLSNTDTNRSSLGKQYSRFDAQVRALQCDFDTYCSEPEDKE 181

Query: 367 DFMKWK-LGFQVYENEEEAESLVGENGVMRKL 459
           D+ KWK  GF + E +EE E  + ENGV+R++
Sbjct: 182 DYEKWKSRGFVIDEKKEEIERFISENGVIREI 213


>ref|XP_004134462.1| PREDICTED: BSD domain-containing protein 1-like [Cucumis sativus]
          Length = 399

 Score = 94.4 bits (233), Expect(2) = 2e-32
 Identities = 65/196 (33%), Positives = 99/196 (50%), Gaps = 15/196 (7%)
 Frame = +3

Query: 456 VVPSLVDREVFWERYFYRVFKLKQVEDASRVL*NERLVGXXXXXXXXXXXXXXXXXXXXX 635
           VVPS +  ++FW RYFY   K+KQ E+A RV   +R +                      
Sbjct: 228 VVPSRISHDIFWSRYFYNFHKIKQAEEA-RVKLVKRAI---------------------- 264

Query: 636 NQRLKRRM*WRISKLRN*RLGMVAQSVYNEKVVEGEEKASPSED----------GEAL-- 779
           + + +  + W + +  +   G+  +S  N K +EG  K    +D          GE++  
Sbjct: 265 SAKDEEELSWDVEEDDDKEGGVSGESSENGKTIEGNMKKIDVDDSLKKMGGDGRGESVDS 324

Query: 780 --KSSELPVVSLVSKEEEDEDLGWDEIEDIEGNHDEK-KVSVGGRLNRSDLRKRLSGADE 950
             K S++ ++S    EEE+E+  WDEIE+I    + K KV   G + +  L K+LS A++
Sbjct: 325 SCKDSDISIISSQGGEEEEEE--WDEIEEIGTIEEAKGKVFASGSVQKFGLNKKLSVAED 382

Query: 951 EEDLSWDIEDDDEPVK 998
           EEDLSWDIED+DEP K
Sbjct: 383 EEDLSWDIEDEDEPTK 398



 Score = 72.4 bits (176), Expect(2) = 2e-32
 Identities = 57/186 (30%), Positives = 87/186 (46%), Gaps = 68/186 (36%)
 Frame = +1

Query: 112 WNFNTLIKSISTKSDTLISTYKRDLVEFQTGLKKET--------QAITQLPSSLE----- 252
           W+F  LIK+++TKS+++IS Y+RDL E  +GL+KET        +A+  LP++L+     
Sbjct: 41  WSFGGLIKTLATKSESVISNYRRDLEELGSGLRKETSVIREVASRAVKDLPTTLDVGASV 100

Query: 253 -----------------SVWRGTSQIIL--------------NTENNNIL---------- 309
                            +VW+ TS+II               N ENN+ +          
Sbjct: 101 AQESLESVGQAIDDIGSAVWKSTSKIISHGRDTFLASDLVSENHENNSDIVISSNQLNKP 160

Query: 310 ------KYNRFR----AIRNDTSAY----TDDVDFMKWKLGFQVYENEEEAESLVGENGV 447
                 +YNRF     AI+ D + Y     D  ++  WKLGF + E E+E E LV E+  
Sbjct: 161 RNIEFKQYNRFNTQLVAIQRDLNTYLEEPNDIENYKNWKLGFVLEEKEKEIEDLVKESDD 220

Query: 448 MRKLCR 465
           +R+  R
Sbjct: 221 VRETYR 226


>emb|CBI32321.3| unnamed protein product [Vitis vinifera]
          Length = 350

 Score = 81.3 bits (199), Expect(2) = 6e-30
 Identities = 60/186 (32%), Positives = 84/186 (45%), Gaps = 3/186 (1%)
 Frame = +3

Query: 453  KVVPSLVDREVFWERYFYRVFKLKQVEDASRVL*NERLVGXXXXXXXXXXXXXXXXXXXX 632
            ++VP  VD+E FW RYFYRV+KLKQ ED                                
Sbjct: 171  RIVPKNVDQETFWFRYFYRVYKLKQAEDV------------------------------- 199

Query: 633  XNQRLKRRM*WRISKLRN*RLGMVAQSVYNEKVVEGEEKAS---PSEDGEALKSSELPVV 803
                               R  +V +++      E EE+ S     ED +   + E+   
Sbjct: 200  -------------------RASLVKRAIMR----EDEEELSWDVEDEDEDDETTREVGGK 236

Query: 804  SLVSKEEEDEDLGWDEIEDIEGNHDEKKVSVGGRLNRSDLRKRLSGADEEEDLSWDIEDD 983
            +    E+E+ +LG  + E I     +K+  +    NR ++RKRLS ADEEEDL+WDIEDD
Sbjct: 237  NSEKMEKENRELGNKDYEKIV----KKEERMNYPANRDNMRKRLSAADEEEDLNWDIEDD 292

Query: 984  DEPVKH 1001
            DEPVK+
Sbjct: 293  DEPVKN 298



 Score = 77.0 bits (188), Expect(2) = 6e-30
 Identities = 55/173 (31%), Positives = 80/173 (46%), Gaps = 23/173 (13%)
 Frame = +1

Query: 1   NFFKSVYSDDKDXXXXXXXXXXXXXXXXXXXXXXXXR-------------WNFNTLIKSI 141
           +FFKSV+SDD D                                      W+F  LIK++
Sbjct: 2   DFFKSVFSDDPDPPRFDPDPESPKKPSQSEEDDAPDAKPDPNPNPSAGGGWSFGGLIKTL 61

Query: 142 STKSDTLISTYKRDLVEFQTGLKKETQAITQLPSSLESVWRGTSQIILNTENNNILK--Y 315
           +TKS+++I  Y+RDL EF TGLK ET A              T +   N  N  ++   +
Sbjct: 62  TTKSESVIEIYRRDLQEFGTGLKHETAAFLD---------TDTDENAQNHSNQGVISKPF 112

Query: 316 NRF----RAIRNDTSAYTDDV----DFMKWKLGFQVYENEEEAESLVGENGVM 450
           +RF    RAI+ND + Y ++     D+ KWKL F + +  EE ++L+ ENG M
Sbjct: 113 SRFDAQVRAIQNDVNTYVEEPEDLDDYNKWKLEFVLDDKGEEIQNLLEENGAM 165


Top