BLASTX nr result

ID: Coptis24_contig00021430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021430
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD96899.1| hypothetical protein [Cleome spinosa]                   56   3e-06
ref|XP_004172498.1| PREDICTED: probable tRNA (guanine(26)-N(2))-...    55   5e-06
ref|XP_004141471.1| PREDICTED: probable tRNA (guanine(26)-N(2))-...    55   5e-06
ref|XP_003554958.1| PREDICTED: probable N(2),N(2)-dimethylguanos...    55   5e-06
ref|XP_003554957.1| PREDICTED: probable N(2),N(2)-dimethylguanos...    55   5e-06

>gb|ABD96899.1| hypothetical protein [Cleome spinosa]
          Length = 534

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/30 (86%), Positives = 28/30 (93%), Gaps = 1/30 (3%)
 Frame = +1

Query: 70  VQSVVDGGILMCIATDLAV-CGGNGEVCYS 156
           VQSVVDGG+LMC ATD+AV CGGNGEVCYS
Sbjct: 217 VQSVVDGGLLMCTATDMAVLCGGNGEVCYS 246


>ref|XP_004172498.1| PREDICTED: probable tRNA (guanine(26)-N(2))-dimethyltransferase
           2-like, partial [Cucumis sativus]
          Length = 340

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/30 (86%), Positives = 28/30 (93%), Gaps = 1/30 (3%)
 Frame = +1

Query: 70  VQSVVDGGILMCIATDLAV-CGGNGEVCYS 156
           VQSVVDGG+LMC ATD+AV CGGNGEVCYS
Sbjct: 221 VQSVVDGGMLMCTATDMAVLCGGNGEVCYS 250


>ref|XP_004141471.1| PREDICTED: probable tRNA (guanine(26)-N(2))-dimethyltransferase
           2-like [Cucumis sativus]
          Length = 581

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/30 (86%), Positives = 28/30 (93%), Gaps = 1/30 (3%)
 Frame = +1

Query: 70  VQSVVDGGILMCIATDLAV-CGGNGEVCYS 156
           VQSVVDGG+LMC ATD+AV CGGNGEVCYS
Sbjct: 221 VQSVVDGGMLMCTATDMAVLCGGNGEVCYS 250


>ref|XP_003554958.1| PREDICTED: probable N(2),N(2)-dimethylguanosine tRNA
           methyltransferase 1-like isoform 2 [Glycine max]
          Length = 645

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/30 (86%), Positives = 28/30 (93%), Gaps = 1/30 (3%)
 Frame = +1

Query: 70  VQSVVDGGILMCIATDLAV-CGGNGEVCYS 156
           VQSVVDGG+LMC ATD+AV CGGNGEVCYS
Sbjct: 287 VQSVVDGGMLMCTATDMAVLCGGNGEVCYS 316


>ref|XP_003554957.1| PREDICTED: probable N(2),N(2)-dimethylguanosine tRNA
           methyltransferase 1-like isoform 1 [Glycine max]
          Length = 638

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/30 (86%), Positives = 28/30 (93%), Gaps = 1/30 (3%)
 Frame = +1

Query: 70  VQSVVDGGILMCIATDLAV-CGGNGEVCYS 156
           VQSVVDGG+LMC ATD+AV CGGNGEVCYS
Sbjct: 280 VQSVVDGGMLMCTATDMAVLCGGNGEVCYS 309


Top