BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021418
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]   124   1e-40
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]   124   2e-40
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop...   115   2e-39
emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera]   120   2e-38
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]   110   2e-37

>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
          Length = 1039

 Score =  124 bits (312), Expect(2) = 1e-40
 Identities = 58/106 (54%), Positives = 74/106 (69%)
 Frame = -2

Query: 405 ISLYLFGVSVLTTAYLINKLPTPLLKGKSPNELLFQAPPNYLHLQVFGCLCFAYNTTIKH 226
           + L  +G S+ T  YLIN+LPTPLL  KSP +LL    P+Y HL+ FGCLC+A N    H
Sbjct: 307 LPLKFWGESIQTACYLINRLPTPLLSHKSPYQLLXNKLPSYHHLRTFGCLCYATNLLPTH 366

Query: 225 KFDQRAKPVIFVGYPHAQKEYCVFDISSKKIYVSRDVIFHENIFPY 88
           KFDQRA+  IFVGYP  QK Y V+D+ + K + S DV+FHE+IFP+
Sbjct: 367 KFDQRARRCIFVGYPLGQKGYRVYDLETNKFFSSXDVVFHEHIFPF 412



 Score = 68.2 bits (165), Expect(2) = 1e-40
 Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 9/134 (6%)
 Frame = -1

Query: 754 FFLTIVDDFTHAT*LYLILVKSKTAKILKCFFAMVRIQFHSNIHSVISGIHYVNERFNDI 575
           +FLTIVDD T  T ++L+  KS+T  IL+ F + V  QF+                   I
Sbjct: 206 YFLTIVDDHTRYTWIHLMSFKSETQGILQSFISWVETQFN-----------------RCI 248

Query: 574 QAVRSNTGSEFLKICNIVFLNMELFINAVALLHH---------NKMV*SKEHHLLNIARA 422
           + +R++ G+E          +M+ +++   + +H         N +V  K  HLLN+ RA
Sbjct: 249 KTLRTDNGTEIS--------SMKQYLDTKGINYHHSCAYTPQQNGVVERKHRHLLNVGRA 300

Query: 421 LHFQAHLPLSFWGE 380
           L FQA+LPL FWGE
Sbjct: 301 LRFQANLPLKFWGE 314


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score =  124 bits (311), Expect(2) = 2e-40
 Identities = 58/106 (54%), Positives = 74/106 (69%)
 Frame = -2

Query: 405  ISLYLFGVSVLTTAYLINKLPTPLLKGKSPNELLFQAPPNYLHLQVFGCLCFAYNTTIKH 226
            + L  +G S+ T  YLIN+LPTPLL  KSP +LL    P+Y HL+ FGCLC+A N    H
Sbjct: 715  LPLKFWGESIQTACYLINRLPTPLLSHKSPYQLLXNKLPSYHHLRTFGCLCYATNLLPTH 774

Query: 225  KFDQRAKPVIFVGYPHAQKEYCVFDISSKKIYVSRDVIFHENIFPY 88
            KFDQRA+  IFVGYP  QK Y V+D+ + K + S DV+FHE+IFP+
Sbjct: 775  KFDQRARRCIFVGYPLGQKGYRVYDLXTNKFFSSXDVVFHEHIFPF 820



 Score = 68.2 bits (165), Expect(2) = 2e-40
 Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 9/134 (6%)
 Frame = -1

Query: 754 FFLTIVDDFTHAT*LYLILVKSKTAKILKCFFAMVRIQFHSNIHSVISGIHYVNERFNDI 575
           +FLTIVDD T  T ++L+  KS+T  IL+ F + V  QF+                   I
Sbjct: 614 YFLTIVDDHTRYTWIHLMSFKSETQGILQSFISWVETQFN-----------------RCI 656

Query: 574 QAVRSNTGSEFLKICNIVFLNMELFINAVALLHH---------NKMV*SKEHHLLNIARA 422
           + +R++ G+E          +M+ +++   + +H         N +V  K  HLLN+ RA
Sbjct: 657 KTLRTDNGTEIS--------SMKQYLDTKGINYHHSCAYTPQQNGVVERKHRHLLNVGRA 708

Query: 421 LHFQAHLPLSFWGE 380
           L FQA+LPL FWGE
Sbjct: 709 LRFQANLPLKFWGE 722


>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
          Length = 1152

 Score =  115 bits (288), Expect(2) = 2e-39
 Identities = 54/99 (54%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
 Frame = -2

Query: 381 SVLTTAYLINKLPTPLLKGKSPNELLFQAPPNYLHLQVFGCLCFAYNTTIK-HKFDQRAK 205
           SVLT AYLIN+ PTP+L GK+P ++L+  PP+Y  L+VFG LCFA   T +  KF +R +
Sbjct: 701 SVLTAAYLINRTPTPILDGKTPYKILYSQPPSYASLRVFGSLCFARKHTGRLDKFQERGR 760

Query: 204 PVIFVGYPHAQKEYCVFDISSKKIYVSRDVIFHENIFPY 88
             IFVGYPH QK + ++DI S+  +VSRDV+F E+IFP+
Sbjct: 761 KCIFVGYPHGQKGWRIYDIESQIFFVSRDVVFQEDIFPF 799



 Score = 73.9 bits (180), Expect(2) = 2e-39
 Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
 Frame = -1

Query: 754 FFLTIVDDFTHAT*LYLILVKSKTAKILKCFFAMVRIQFHSNIHSVISGIHYVNERFNDI 575
           +FLTIVDD + A  ++L+L KS+ A +L+ F AM   QF+                   +
Sbjct: 592 YFLTIVDDHSRAVWIHLMLAKSEVASLLQQFIAMASRQFN-----------------KQV 634

Query: 574 QAVRSNTGSEFLKICNIVFLNMELF--INAVALLHHNKMV*SKEHHLLNIARALHFQAHL 401
           + VRSN G+EF+ +    F    +   I+ V     N  V  K  H+LN+AR+L FQA L
Sbjct: 635 KTVRSNNGTEFMSL-KSYFAERGIVHQISCVYTHQQNGRVERKHRHILNVARSLLFQAEL 693

Query: 400 PLSFWGE 380
           P+SFW E
Sbjct: 694 PISFWEE 700


>emb|CAN75292.1| hypothetical protein VITISV_014745 [Vitis vinifera]
          Length = 1472

 Score =  120 bits (301), Expect(2) = 2e-38
 Identities = 55/101 (54%), Positives = 72/101 (71%)
 Frame = -2

Query: 390 FGVSVLTTAYLINKLPTPLLKGKSPNELLFQAPPNYLHLQVFGCLCFAYNTTIKHKFDQR 211
           +G   LT  ++IN LP+P+L  K+P ELL+  PP+Y +L VFGCL +A N    HKFD R
Sbjct: 688 WGECALTAVHIINWLPSPVLSFKTPFELLYSKPPSYSYLHVFGCLAYATNVHTSHKFDYR 747

Query: 210 AKPVIFVGYPHAQKEYCVFDISSKKIYVSRDVIFHENIFPY 88
           A   IF+GYP  QK Y +FD+S+KK++ SRDV FHE+IFPY
Sbjct: 748 AMSSIFIGYPVGQKAYKLFDLSTKKVFTSRDVKFHEDIFPY 788



 Score = 65.5 bits (158), Expect(2) = 2e-38
 Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
 Frame = -1

Query: 754 FFLTIVDDFTHAT*LYLILVKSKTAKILKCFFAMVRIQFHSNIHSVISGIHYVNERFNDI 575
           +FLTIVDD+T  T ++L+  K +   +LK FF+ V  QF   I                 
Sbjct: 582 YFLTIVDDYTRFTWIFLMRHKDEAQSLLKRFFSYVFTQFEFCI----------------- 624

Query: 574 QAVRSNTGSEFLKICNIVFLNMELFINA-VALLHHNKMV*SKEHHLLNIARALHFQAHLP 398
           +  R++ G EF  + +    N  +F ++ V     N +V  K  H+L + RAL F A +P
Sbjct: 625 KTFRNDNGREFTSLHSFFQDNGVIFQHSYVYTPQQNGVVERKHRHILQVTRALKFHAQVP 684

Query: 397 LSFWGECS 374
             FWGEC+
Sbjct: 685 TQFWGECA 692


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score =  110 bits (275), Expect(2) = 2e-37
 Identities = 52/102 (50%), Positives = 73/102 (71%), Gaps = 1/102 (0%)
 Frame = -2

Query: 390 FGVSVLTTAYLINKLPTPLLKGKSPNELLFQAPPNYLHLQVFGCLCFAYNTTIKH-KFDQ 214
           +G  VLT AYLIN+ PTP+L GK+P E+LF   PNY HL+VFG LC+A+  +  + KFD 
Sbjct: 573 WGECVLTAAYLINRTPTPILDGKTPYEILFGEKPNYEHLRVFGSLCYAHKKSRSNDKFDX 632

Query: 213 RAKPVIFVGYPHAQKEYCVFDISSKKIYVSRDVIFHENIFPY 88
           R++   F GYP+ +K + + D+ +K+ + SRDVIFHE IFP+
Sbjct: 633 RSRRCXFXGYPYGKKGWKLXDLETKEQFESRDVIFHETIFPF 674



 Score = 71.6 bits (174), Expect(2) = 2e-37
 Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
 Frame = -1

Query: 754 FFLTIVDDFTHAT*LYLILVKSKTAKILKCFFAMVRIQFHSNIHSVISGIHYVNERFNDI 575
           +FLTIVDD +    +YL+  KS+T  IL+ F  M + QF                    +
Sbjct: 465 YFLTIVDDHSRGVWIYLMKEKSETKDILQNFCFMTKTQFDK-----------------PV 507

Query: 574 QAVRSNTGSEFLKICNIVFLNMELFINAVALLH---HNKMV*SKEHHLLNIARALHFQAH 404
           + +RS+ G EF     + F   E  +   +L++    N  V  K  H+LNIAR L FQA 
Sbjct: 508 KCIRSDNGLEFCXGQMMSFYKREGILRESSLVNTPQXNGRVERKHQHILNIARTLRFQAC 567

Query: 403 LPLSFWGEC 377
           LP+ FWGEC
Sbjct: 568 LPIDFWGEC 576