BLASTX nr result

ID: Coptis24_contig00021339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021339
         (1889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266347.1| PREDICTED: uncharacterized protein LOC100243...   506   e-141
ref|XP_003528172.1| PREDICTED: uncharacterized protein LOC100796...   489   e-135
ref|XP_002511495.1| tRNA ligase, putative [Ricinus communis] gi|...   489   e-135
ref|XP_003522354.1| PREDICTED: uncharacterized protein LOC100816...   484   e-134
emb|CBI15298.3| unnamed protein product [Vitis vinifera]              479   e-132

>ref|XP_002266347.1| PREDICTED: uncharacterized protein LOC100243405 [Vitis vinifera]
          Length = 718

 Score =  506 bits (1303), Expect = e-141
 Identities = 273/486 (56%), Positives = 310/486 (63%)
 Frame = -1

Query: 1526 TKKTRPARACTARSAPRYDPTDSFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCTKVIT 1347
            T+K RP RACT R+A R       +                              +K++T
Sbjct: 47   TRKERPPRACTTRAAARLYADPPVIERRSKPAKKERNEESPQQQQQC-------ASKIVT 99

Query: 1346 PLVTPPTVEALLPRWKLRGMWELASVFNFLNVFRPLLNITVXXXXXXXXXXXXXXXXXLD 1167
            PLV  P   + LPRW LR MWELAS+ NFL+VFRPLLNI V                 L 
Sbjct: 100  PLVNSPP-PSQLPRWTLRSMWELASILNFLHVFRPLLNIAVEFSAEEFETALITPNNTLS 158

Query: 1166 DIHIPLLKAIPPVNRSALGRNTWVTGLCRKLRDWWYWVAEGELPILASHGTEVEAYKALD 987
            DIHIPLLKAIPPV R AL R TWVT LCRKLRDWW+WVAEGE+PI+AS G EV  Y ALD
Sbjct: 159  DIHIPLLKAIPPVTRMALTRGTWVTVLCRKLRDWWHWVAEGEIPIVASQGAEVGMYNALD 218

Query: 986  PGTRVVILRALCEIRAQQEDIRNYIDGSLKHGVQLSVFRKERIGGDSHGISYWYEDDPII 807
            PG RVVIL+ALC+IR +QEDIR +ID S+KHGVQLS FRKER+GGDSHGISYWYEDDPII
Sbjct: 219  PGVRVVILKALCDIRVEQEDIRIFIDNSIKHGVQLSAFRKERVGGDSHGISYWYEDDPII 278

Query: 806  GSRLYREIRXXXXXXXXXXXVLSFPTVSCQWETVATNLEEFEEVSEKLFSSKSRIETAVG 627
            G RLYREIR               P  S QWETVATNL+EF++VSEKLFSSK+R E ++G
Sbjct: 279  GHRLYREIRKVEVKKAKVKGSQCLPNASYQWETVATNLDEFQDVSEKLFSSKNRTEASLG 338

Query: 626  KKLKNDXXXXXXXXXXXXXXXXXKQHREALLLDSFLSADGIASGRSLRDRKPVTYTFDDF 447
            KKLKND                 KQHR+ALLLD+FLS DG+A GRSLRDRKPVTYTFDD+
Sbjct: 339  KKLKNDMLPEIEKVHKRKERMLKKQHRQALLLDNFLSVDGLAPGRSLRDRKPVTYTFDDY 398

Query: 446  DRSITEAIKTTKRKQPSPELAVGREVGTKPEASSNGKLNGGLHTPRYVXXXXXXXXXXXX 267
            DRSI EAIK TKRK PSPE  V RE  TKPE S+NG+ +G    P++V            
Sbjct: 399  DRSINEAIKITKRKPPSPEPTVRREGVTKPEPSTNGRWSGPSQAPQHVNFNALSPKSPDY 458

Query: 266  XXXXXXXXXXSLDXXXXXXXXXXRYSEMEFVAAISDNEAGFDSDDDIVGEVVYDEDYLRS 87
                       LD          RYSE EFV A+SDN+A FDSDDDIVGE VYDE+YLR 
Sbjct: 459  DEIDDEHKSEPLDRSNRRRQRPQRYSEKEFVEAVSDNDADFDSDDDIVGEAVYDEEYLRK 518

Query: 86   RKQRKV 69
            RKQRK+
Sbjct: 519  RKQRKL 524


>ref|XP_003528172.1| PREDICTED: uncharacterized protein LOC100796430 [Glycine max]
          Length = 737

 Score =  489 bits (1258), Expect = e-135
 Identities = 265/491 (53%), Positives = 310/491 (63%), Gaps = 5/491 (1%)
 Frame = -1

Query: 1529 ATKKTRPARACTARSAPRYDPTDSFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCTKVI 1350
            A  ++RP+RACT R+A R                                    QC+K++
Sbjct: 44   APTRSRPSRACTIRAAARLLSASQ---PARPKAARREPRREGSPSSPPPPPQLQQCSKIV 100

Query: 1349 TPLVTPPTVEALLPRWKLRGMWELASVFNFLNVFRPLLNITVXXXXXXXXXXXXXXXXXL 1170
            TPLV PP   A LPR+ LR MWELAS+ NFLN+FRPLLNI+V                 L
Sbjct: 101  TPLVEPPPA-AQLPRYNLRSMWELASILNFLNLFRPLLNISVEFSAEEFETALLTPNDTL 159

Query: 1169 DDIHIPLLKAIPPVNRSALGRNTWVTGLCRKLRDWWYWVAEGELPILASHGTEVEAYKAL 990
             DIH+PLLKAIPP+ R AL R+TW+T LCRKLRDWW WVA+G+LPI+ASHG EVE YK+L
Sbjct: 160  GDIHVPLLKAIPPITRMALSRDTWITVLCRKLRDWWQWVADGDLPIVASHGMEVEVYKSL 219

Query: 989  DPGTRVVILRALCEIRAQQEDIRNYIDGSLKHGVQLSVFRKERIGGDSHGISYWYEDDPI 810
            DPG RVVIL+ALC+IR +QEDIR YID S+KHG+ LS FRKERIGGDSHGISYWYEDD I
Sbjct: 220  DPGVRVVILKALCDIRVEQEDIRGYIDRSIKHGIPLSTFRKERIGGDSHGISYWYEDDQI 279

Query: 809  IGSRLYREIRXXXXXXXXXXXVLS---FPTVSCQWETVATNLEEFEEVSEKLFSSKSRIE 639
            IG RLYREIR                 F   + QWETVATN +EF++VSEKLF+SK+R E
Sbjct: 280  IGHRLYREIRKTEVVQMKKGKPRGSQVFSNTTYQWETVATNFDEFQDVSEKLFTSKNRTE 339

Query: 638  TAVGKKLKNDXXXXXXXXXXXXXXXXXKQHREALLLDSFLSADGIASGRSLRDRKPVTYT 459
             +VGKK+K D                 KQHR+ALLLD+FL  DGIA GRSLRDRKPVTYT
Sbjct: 340  ASVGKKVKIDMLPEIEKVHKRKEKLLKKQHRQALLLDNFLGVDGIAPGRSLRDRKPVTYT 399

Query: 458  FDDFDRSITEAIKTTKRKQPSPELAVGREVGTKPEASSNGKLNGGLHTPRYVXXXXXXXX 279
            FDD+DRSI EAIK TKRK PSPEL   RE G KPEA +NGK +G  H P+ +        
Sbjct: 400  FDDYDRSINEAIKITKRKPPSPELIPRREAGAKPEALTNGKWSGPSHDPQDLNFGMPSPK 459

Query: 278  XXXXXXXXXXXXXXSLDXXXXXXXXXXR--YSEMEFVAAISDNEAGFDSDDDIVGEVVYD 105
                           LD             YSE +FV A+SDNEA +DSDDDIVGE VYD
Sbjct: 460  SPDSDDMEEENQTDMLDLDRSNRRRQKPKRYSEKDFVEALSDNEADYDSDDDIVGEAVYD 519

Query: 104  EDYLRSRKQRK 72
            E+YL+ RKQR+
Sbjct: 520  EEYLQKRKQRR 530


>ref|XP_002511495.1| tRNA ligase, putative [Ricinus communis] gi|223550610|gb|EEF52097.1|
            tRNA ligase, putative [Ricinus communis]
          Length = 721

 Score =  489 bits (1258), Expect = e-135
 Identities = 266/484 (54%), Positives = 302/484 (62%)
 Frame = -1

Query: 1523 KKTRPARACTARSAPRYDPTDSFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCTKVITP 1344
            +  RP+RACT R+A R                                      +K+ITP
Sbjct: 41   RSNRPSRACTLRAAERLQAAQQAAAIERKQKPNRKDQQQRLDESPQQKEQCSANSKIITP 100

Query: 1343 LVTPPTVEALLPRWKLRGMWELASVFNFLNVFRPLLNITVXXXXXXXXXXXXXXXXXLDD 1164
            LV  P   A LPRW LR MWELASV NFL+VFRPLLNI +                 L D
Sbjct: 101  LVGAPE-PAQLPRWSLRSMWELASVLNFLHVFRPLLNIQIEFSAEEFETALITPNDTLGD 159

Query: 1163 IHIPLLKAIPPVNRSALGRNTWVTGLCRKLRDWWYWVAEGELPILASHGTEVEAYKALDP 984
            IH+PLLKAIPP+ R AL R+TW+T LCRKLRDWW+WVA+GELPI+ASHG EVE YK LDP
Sbjct: 160  IHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWHWVADGELPIVASHGAEVEVYKTLDP 219

Query: 983  GTRVVILRALCEIRAQQEDIRNYIDGSLKHGVQLSVFRKERIGGDSHGISYWYEDDPIIG 804
            G RVVIL+ALC+IR +QEDIRNYID S+KHG+QLSVFRKER+GGDS GI+YWYEDDPIIG
Sbjct: 220  GIRVVILKALCDIRVEQEDIRNYIDNSVKHGIQLSVFRKERVGGDSQGINYWYEDDPIIG 279

Query: 803  SRLYREIRXXXXXXXXXXXVLSFPTVSCQWETVATNLEEFEEVSEKLFSSKSRIETAVGK 624
             RLYREIR                  S QWETVATN EEF++VSEKLF+SK+R E ++GK
Sbjct: 280  HRLYREIRKVEVKKAKVKGSQVLLNASYQWETVATNFEEFQDVSEKLFASKNRTEASLGK 339

Query: 623  KLKNDXXXXXXXXXXXXXXXXXKQHREALLLDSFLSADGIASGRSLRDRKPVTYTFDDFD 444
            KLKND                 KQHR+ALLLD+FLS DG+  GRSLRDRKPVTYTFDD+D
Sbjct: 340  KLKNDMLSEIEKVHKRKERLLKKQHRQALLLDNFLSVDGLGPGRSLRDRKPVTYTFDDYD 399

Query: 443  RSITEAIKTTKRKQPSPELAVGREVGTKPEASSNGKLNGGLHTPRYVXXXXXXXXXXXXX 264
            RSI EAIK TKRK PSPE    RE   KPEAS NGK +G      +              
Sbjct: 400  RSINEAIKITKRKPPSPEPIHRREGVFKPEASENGKWSGPSDVS-HGTFNLTPPDSPGYD 458

Query: 263  XXXXXXXXXSLDXXXXXXXXXXRYSEMEFVAAISDNEAGFDSDDDIVGEVVYDEDYLRSR 84
                      LD          RYS  EFV A+SDNEA FDSDDDIVGE VYDE+YLR R
Sbjct: 459  DMEEEHKTEQLDRSNRRRQRPQRYSAKEFVEAVSDNEADFDSDDDIVGEAVYDEEYLRKR 518

Query: 83   KQRK 72
            KQR+
Sbjct: 519  KQRR 522


>ref|XP_003522354.1| PREDICTED: uncharacterized protein LOC100816258 [Glycine max]
          Length = 737

 Score =  484 bits (1247), Expect = e-134
 Identities = 261/488 (53%), Positives = 309/488 (63%), Gaps = 5/488 (1%)
 Frame = -1

Query: 1520 KTRPARACTARSAPRYDPTDSFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCTKVITPL 1341
            ++RP+RACT R+A R      +                             QC+K++TPL
Sbjct: 48   RSRPSRACTMRTAARL-----YAASQPARPKAARREPRREESPSPPSPKLQQCSKIVTPL 102

Query: 1340 VTPPTVEALLPRWKLRGMWELASVFNFLNVFRPLLNITVXXXXXXXXXXXXXXXXXLDDI 1161
            V PP     LPR+ LR MWELAS+ NFLN+FRPLLNI+V                 L DI
Sbjct: 103  VEPPP-PVQLPRYNLRSMWELASILNFLNLFRPLLNISVEFSAEEFETALLTPNDTLGDI 161

Query: 1160 HIPLLKAIPPVNRSALGRNTWVTGLCRKLRDWWYWVAEGELPILASHGTEVEAYKALDPG 981
            H+PLLKAIPP+ R AL R+TW+T LCRKLRDWW+WVA+G+LPI+ASHG EVE YK+LDPG
Sbjct: 162  HMPLLKAIPPITRMALSRDTWITVLCRKLRDWWHWVADGDLPIVASHGAEVEVYKSLDPG 221

Query: 980  TRVVILRALCEIRAQQEDIRNYIDGSLKHGVQLSVFRKERIGGDSHGISYWYEDDPIIGS 801
             RV+IL+ALC+IR +QEDIR YID S+KHG+ LS FRKERIGGDSHGISYWYEDD IIG 
Sbjct: 222  VRVIILKALCDIRVEQEDIRGYIDRSIKHGIPLSTFRKERIGGDSHGISYWYEDDQIIGH 281

Query: 800  RLYREIRXXXXXXXXXXXVLS---FPTVSCQWETVATNLEEFEEVSEKLFSSKSRIETAV 630
            RLYREIR                 F   + QWETVATN +EF++VSEKLF+SK+R E +V
Sbjct: 282  RLYREIRKTEVVQMKKGKPRGSQVFSNTTYQWETVATNFDEFQDVSEKLFTSKNRTEASV 341

Query: 629  GKKLKNDXXXXXXXXXXXXXXXXXKQHREALLLDSFLSADGIASGRSLRDRKPVTYTFDD 450
            GKK+K D                 KQHR+ALLLD+FL  DG+A GRSLRDRKPVTYTFDD
Sbjct: 342  GKKVKIDMLPEIEKVHRRKEKLLKKQHRQALLLDNFLGVDGLAPGRSLRDRKPVTYTFDD 401

Query: 449  FDRSITEAIKTTKRKQPSPELAVGREVGTKPEASSNGKLNGGLHTPRYVXXXXXXXXXXX 270
            +DRSI+EAIK TKRK PSPEL   RE G K  A +NGK +G  H P+ +           
Sbjct: 402  YDRSISEAIKITKRKPPSPELIPRREAGAKHAALTNGKWSGPSHDPQDLNFGMPSPKSPD 461

Query: 269  XXXXXXXXXXXSLDXXXXXXXXXXR--YSEMEFVAAISDNEAGFDSDDDIVGEVVYDEDY 96
                        LD             YSE EFV A+SDNEA +DSDDDIVGE VYDE+Y
Sbjct: 462  FDDMEEDNQTDMLDLDRSNRRRQKPKRYSEKEFVEALSDNEADYDSDDDIVGEAVYDEEY 521

Query: 95   LRSRKQRK 72
            L+ RKQRK
Sbjct: 522  LQKRKQRK 529


>emb|CBI15298.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  479 bits (1232), Expect = e-132
 Identities = 250/407 (61%), Positives = 280/407 (68%)
 Frame = -1

Query: 1289 MWELASVFNFLNVFRPLLNITVXXXXXXXXXXXXXXXXXLDDIHIPLLKAIPPVNRSALG 1110
            MWELAS+ NFL+VFRPLLNI V                 L DIHIPLLKAIPPV R AL 
Sbjct: 1    MWELASILNFLHVFRPLLNIAVEFSAEEFETALITPNNTLSDIHIPLLKAIPPVTRMALT 60

Query: 1109 RNTWVTGLCRKLRDWWYWVAEGELPILASHGTEVEAYKALDPGTRVVILRALCEIRAQQE 930
            R TWVT LCRKLRDWW+WVAEGE+PI+AS G EV  Y ALDPG RVVIL+ALC+IR +QE
Sbjct: 61   RGTWVTVLCRKLRDWWHWVAEGEIPIVASQGAEVGMYNALDPGVRVVILKALCDIRVEQE 120

Query: 929  DIRNYIDGSLKHGVQLSVFRKERIGGDSHGISYWYEDDPIIGSRLYREIRXXXXXXXXXX 750
            DIR +ID S+KHGVQLS FRKER+GGDSHGISYWYEDDPIIG RLYREIR          
Sbjct: 121  DIRIFIDNSIKHGVQLSAFRKERVGGDSHGISYWYEDDPIIGHRLYREIRKVEVKKAKVK 180

Query: 749  XVLSFPTVSCQWETVATNLEEFEEVSEKLFSSKSRIETAVGKKLKNDXXXXXXXXXXXXX 570
                 P  S QWETVATNL+EF++VSEKLFSSK+R E ++GKKLKND             
Sbjct: 181  GSQCLPNASYQWETVATNLDEFQDVSEKLFSSKNRTEASLGKKLKNDMLPEIEKVHKRKE 240

Query: 569  XXXXKQHREALLLDSFLSADGIASGRSLRDRKPVTYTFDDFDRSITEAIKTTKRKQPSPE 390
                KQHR+ALLLD+FLS DG+A GRSLRDRKPVTYTFDD+DRSI EAIK TKRK PSPE
Sbjct: 241  RMLKKQHRQALLLDNFLSVDGLAPGRSLRDRKPVTYTFDDYDRSINEAIKITKRKPPSPE 300

Query: 389  LAVGREVGTKPEASSNGKLNGGLHTPRYVXXXXXXXXXXXXXXXXXXXXXXSLDXXXXXX 210
              V RE  TKPE S+NG+ +G    P++V                       LD      
Sbjct: 301  PTVRREGVTKPEPSTNGRWSGPSQAPQHVNFNALSPKSPDYDEIDDEHKSEPLDRSNRRR 360

Query: 209  XXXXRYSEMEFVAAISDNEAGFDSDDDIVGEVVYDEDYLRSRKQRKV 69
                RYSE EFV A+SDN+A FDSDDDIVGE VYDE+YLR RKQRK+
Sbjct: 361  QRPQRYSEKEFVEAVSDNDADFDSDDDIVGEAVYDEEYLRKRKQRKL 407


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