BLASTX nr result
ID: Coptis24_contig00021282
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00021282
(918 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270951.1| PREDICTED: putative ABC1 protein At2g40090 i... 245 e-120
ref|XP_003633439.1| PREDICTED: putative ABC1 protein At2g40090 i... 245 e-118
ref|XP_003538462.1| PREDICTED: putative ABC1 protein At2g40090-l... 241 e-116
ref|XP_002533645.1| ATATH9, putative [Ricinus communis] gi|22352... 235 e-115
gb|AAM62483.1| putative ABC1 protein [Arabidopsis thaliana] 233 e-115
>ref|XP_002270951.1| PREDICTED: putative ABC1 protein At2g40090 isoform 1 [Vitis
vinifera] gi|297736618|emb|CBI25489.3| unnamed protein
product [Vitis vinifera]
Length = 538
Score = 245 bits (625), Expect(3) = e-120
Identities = 116/149 (77%), Positives = 132/149 (88%)
Frame = +2
Query: 5 RLVRDSLTAATIAWDYEYSLWGLVEGSVEREKVKRQVHTRCATRLQDLCFRNGGIYIKLG 184
RL+RDS+TAATIA+DYEYSL+GL+EGS ER + K +VH RCA RLQ+LCFRNGG+YIKLG
Sbjct: 48 RLIRDSITAATIAFDYEYSLFGLLEGSPERSRAKHEVHVRCARRLQELCFRNGGLYIKLG 107
Query: 185 QHIAQLEYLVPAEYVHTMRATMLNKCPVSSYEQVCQVFKKELGLKPDEIFLEFDPVPLAS 364
QHI QLEYLVP EYV MR +MLN+CPVSSYEQVC+VFKKELG PDE+F EF+P+P+AS
Sbjct: 108 QHIGQLEYLVPQEYVQIMRESMLNRCPVSSYEQVCEVFKKELGRTPDEVFDEFEPIPIAS 167
Query: 365 ASLAQVHAARTRYGDKVAVKVQHTHMTDT 451
ASLAQVH ARTR G KVAVKVQHTHMTDT
Sbjct: 168 ASLAQVHTARTRDGQKVAVKVQHTHMTDT 196
Score = 185 bits (470), Expect(3) = e-120
Identities = 86/110 (78%), Positives = 101/110 (91%)
Frame = +1
Query: 451 AATDYATVEFIVNTLHRLFPSFDYRWLIDEMRESLPKELDFLVEAKNSEKCLENFRRLSP 630
AA D+ATV+ IVNTLH +FPSFDYRWLI+EM+ESLPKELDFLVEAKNSEKC++NFR+LSP
Sbjct: 197 AAADHATVQLIVNTLHWIFPSFDYRWLIEEMQESLPKELDFLVEAKNSEKCVDNFRKLSP 256
Query: 631 HLSDYVYAPRVYWNLSTSKLLTMEFIDAAEITDVKKIQRLGIQPREVAKL 780
H++ YVYAP VYWNL+TSKLLTMEFID A++ DVK IQRLGI+P EVA+L
Sbjct: 257 HIAHYVYAPMVYWNLTTSKLLTMEFIDGAQVNDVKTIQRLGIRPNEVARL 306
Score = 52.0 bits (123), Expect(3) = e-120
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = +2
Query: 839 VTKAFAEMTFKHGFVHCDPHAANMLV 916
V++AFA+M FKHGFVHCDPHAAN+LV
Sbjct: 307 VSEAFADMMFKHGFVHCDPHAANLLV 332
>ref|XP_003633439.1| PREDICTED: putative ABC1 protein At2g40090 isoform 2 [Vitis
vinifera]
Length = 549
Score = 245 bits (625), Expect(3) = e-118
Identities = 116/149 (77%), Positives = 132/149 (88%)
Frame = +2
Query: 5 RLVRDSLTAATIAWDYEYSLWGLVEGSVEREKVKRQVHTRCATRLQDLCFRNGGIYIKLG 184
RL+RDS+TAATIA+DYEYSL+GL+EGS ER + K +VH RCA RLQ+LCFRNGG+YIKLG
Sbjct: 48 RLIRDSITAATIAFDYEYSLFGLLEGSPERSRAKHEVHVRCARRLQELCFRNGGLYIKLG 107
Query: 185 QHIAQLEYLVPAEYVHTMRATMLNKCPVSSYEQVCQVFKKELGLKPDEIFLEFDPVPLAS 364
QHI QLEYLVP EYV MR +MLN+CPVSSYEQVC+VFKKELG PDE+F EF+P+P+AS
Sbjct: 108 QHIGQLEYLVPQEYVQIMRESMLNRCPVSSYEQVCEVFKKELGRTPDEVFDEFEPIPIAS 167
Query: 365 ASLAQVHAARTRYGDKVAVKVQHTHMTDT 451
ASLAQVH ARTR G KVAVKVQHTHMTDT
Sbjct: 168 ASLAQVHTARTRDGQKVAVKVQHTHMTDT 196
Score = 177 bits (448), Expect(3) = e-118
Identities = 86/121 (71%), Positives = 101/121 (83%), Gaps = 11/121 (9%)
Frame = +1
Query: 451 AATDYATVEFIVNTLHRLFPSFDYRWLIDEMRESLPK-----------ELDFLVEAKNSE 597
AA D+ATV+ IVNTLH +FPSFDYRWLI+EM+ESLPK ELDFLVEAKNSE
Sbjct: 197 AAADHATVQLIVNTLHWIFPSFDYRWLIEEMQESLPKANSFSSYYGCQELDFLVEAKNSE 256
Query: 598 KCLENFRRLSPHLSDYVYAPRVYWNLSTSKLLTMEFIDAAEITDVKKIQRLGIQPREVAK 777
KC++NFR+LSPH++ YVYAP VYWNL+TSKLLTMEFID A++ DVK IQRLGI+P EVA+
Sbjct: 257 KCVDNFRKLSPHIAHYVYAPMVYWNLTTSKLLTMEFIDGAQVNDVKTIQRLGIRPNEVAR 316
Query: 778 L 780
L
Sbjct: 317 L 317
Score = 52.0 bits (123), Expect(3) = e-118
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = +2
Query: 839 VTKAFAEMTFKHGFVHCDPHAANMLV 916
V++AFA+M FKHGFVHCDPHAAN+LV
Sbjct: 318 VSEAFADMMFKHGFVHCDPHAANLLV 343
>ref|XP_003538462.1| PREDICTED: putative ABC1 protein At2g40090-like [Glycine max]
Length = 541
Score = 241 bits (615), Expect(3) = e-116
Identities = 115/149 (77%), Positives = 129/149 (86%)
Frame = +2
Query: 5 RLVRDSLTAATIAWDYEYSLWGLVEGSVEREKVKRQVHTRCATRLQDLCFRNGGIYIKLG 184
RL RD+ TAA IA+DYEYSLWGL+EGS ERE++K +VH R A +LQDLCF+NGG+YIKLG
Sbjct: 46 RLFRDAATAANIAFDYEYSLWGLLEGSSERERIKHEVHLRSAQKLQDLCFKNGGVYIKLG 105
Query: 185 QHIAQLEYLVPAEYVHTMRATMLNKCPVSSYEQVCQVFKKELGLKPDEIFLEFDPVPLAS 364
QH+ QLEYLVP EYV TMR +MLN+CPVSSYEQVC VFKKELG PD+IF EFDPVP+AS
Sbjct: 106 QHLGQLEYLVPEEYVRTMRESMLNRCPVSSYEQVCNVFKKELGDTPDKIFSEFDPVPIAS 165
Query: 365 ASLAQVHAARTRYGDKVAVKVQHTHMTDT 451
ASLAQVH ART G KVAVKVQHTHMTDT
Sbjct: 166 ASLAQVHVARTHDGQKVAVKVQHTHMTDT 194
Score = 175 bits (444), Expect(3) = e-116
Identities = 81/110 (73%), Positives = 96/110 (87%)
Frame = +1
Query: 451 AATDYATVEFIVNTLHRLFPSFDYRWLIDEMRESLPKELDFLVEAKNSEKCLENFRRLSP 630
AA D+ATVE +VNTLHR FPSFDYRWLIDE+ ESLPKELDFL EAKNSE+CLENF +LSP
Sbjct: 195 AAADHATVELVVNTLHRFFPSFDYRWLIDEISESLPKELDFLTEAKNSERCLENFHKLSP 254
Query: 631 HLSDYVYAPRVYWNLSTSKLLTMEFIDAAEITDVKKIQRLGIQPREVAKL 780
H+++YVYAP+VYWNLSTSKLLTMEF++ A + DVK IQ+LGI E++ L
Sbjct: 255 HIANYVYAPKVYWNLSTSKLLTMEFMEGAYVNDVKTIQKLGINLHELSTL 304
Score = 51.6 bits (122), Expect(3) = e-116
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +2
Query: 839 VTKAFAEMTFKHGFVHCDPHAANMLV 916
V++ FAEM FKHGFVHCDPHAAN+LV
Sbjct: 305 VSQTFAEMMFKHGFVHCDPHAANLLV 330
>ref|XP_002533645.1| ATATH9, putative [Ricinus communis] gi|223526458|gb|EEF28733.1|
ATATH9, putative [Ricinus communis]
Length = 549
Score = 235 bits (599), Expect(3) = e-115
Identities = 113/150 (75%), Positives = 130/150 (86%)
Frame = +2
Query: 2 LRLVRDSLTAATIAWDYEYSLWGLVEGSVEREKVKRQVHTRCATRLQDLCFRNGGIYIKL 181
+RL RD++TAA+IA+DYEYSL GL EGS ER K+K +VH R A +LQ+LCF+NGGIYIKL
Sbjct: 47 VRLARDAITAASIAFDYEYSLLGLPEGSAERSKMKHEVHLRSARKLQELCFKNGGIYIKL 106
Query: 182 GQHIAQLEYLVPAEYVHTMRATMLNKCPVSSYEQVCQVFKKELGLKPDEIFLEFDPVPLA 361
GQHI QLEYLVP EYV MR +MLNKCPVSSY+QVC+VFKKELG PD++F+EFDPVP+A
Sbjct: 107 GQHIGQLEYLVPEEYVKIMRESMLNKCPVSSYDQVCEVFKKELGETPDKVFVEFDPVPIA 166
Query: 362 SASLAQVHAARTRYGDKVAVKVQHTHMTDT 451
SASLAQVH ART G KVAVKVQHTHMTDT
Sbjct: 167 SASLAQVHVARTTDGQKVAVKVQHTHMTDT 196
Score = 179 bits (453), Expect(3) = e-115
Identities = 90/119 (75%), Positives = 100/119 (84%), Gaps = 9/119 (7%)
Frame = +1
Query: 451 AATDYATVEFIVNTLHRLFPSFDYRWLIDEMRESLPK---------ELDFLVEAKNSEKC 603
AA D A+VE IVNTLH LFPSFDYRWL+ EMRES+PK ELDFLVEAKNSEKC
Sbjct: 197 AAADNASVEMIVNTLHWLFPSFDYRWLVAEMRESVPKASSFTCDHQELDFLVEAKNSEKC 256
Query: 604 LENFRRLSPHLSDYVYAPRVYWNLSTSKLLTMEFIDAAEITDVKKIQRLGIQPREVAKL 780
L NFR+LSPH++DYVYAP+V+WNLSTSKLLTMEFIDAA++ DVK IQ LGIQP EVAKL
Sbjct: 257 LHNFRKLSPHIADYVYAPKVHWNLSTSKLLTMEFIDAAQVNDVKAIQGLGIQPCEVAKL 315
Score = 51.6 bits (122), Expect(3) = e-115
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +2
Query: 839 VTKAFAEMTFKHGFVHCDPHAANMLV 916
V++ FAEM FKHGFVHCDPHAAN+LV
Sbjct: 316 VSQTFAEMMFKHGFVHCDPHAANLLV 341
>gb|AAM62483.1| putative ABC1 protein [Arabidopsis thaliana]
Length = 538
Score = 233 bits (594), Expect(3) = e-115
Identities = 112/150 (74%), Positives = 129/150 (86%)
Frame = +2
Query: 2 LRLVRDSLTAATIAWDYEYSLWGLVEGSVEREKVKRQVHTRCATRLQDLCFRNGGIYIKL 181
+RL R+++TAA+IA+DYEYSL GL EGS ER KVK +VH R A +LQ+LCF+NGGIYIKL
Sbjct: 47 VRLYRNTVTAASIAFDYEYSLLGLAEGSSERAKVKHEVHLRSAQKLQELCFKNGGIYIKL 106
Query: 182 GQHIAQLEYLVPAEYVHTMRATMLNKCPVSSYEQVCQVFKKELGLKPDEIFLEFDPVPLA 361
GQHI QLEYLVP EYV TMR +MLNKCP+SSYEQVC+VFKKE+G PD++F EFDPVP+A
Sbjct: 107 GQHIGQLEYLVPEEYVRTMRESMLNKCPISSYEQVCEVFKKEVGEMPDQVFAEFDPVPIA 166
Query: 362 SASLAQVHAARTRYGDKVAVKVQHTHMTDT 451
SASLAQVH ART G KVAVKVQH HMTDT
Sbjct: 167 SASLAQVHVARTHDGKKVAVKVQHAHMTDT 196
Score = 181 bits (459), Expect(3) = e-115
Identities = 83/110 (75%), Positives = 99/110 (90%)
Frame = +1
Query: 451 AATDYATVEFIVNTLHRLFPSFDYRWLIDEMRESLPKELDFLVEAKNSEKCLENFRRLSP 630
AA D A V +VNTLHR+FPSFDYRWL+DEM ESLPKELDFLVEAKN+EKCL+NFR+LSP
Sbjct: 197 AAADTAAVGVLVNTLHRIFPSFDYRWLLDEMSESLPKELDFLVEAKNNEKCLDNFRKLSP 256
Query: 631 HLSDYVYAPRVYWNLSTSKLLTMEFIDAAEITDVKKIQRLGIQPREVAKL 780
H+++YVYAP +YWNLSTSKLLTMEF+D A++ DV KI++LGIQP EV+KL
Sbjct: 257 HIAEYVYAPTIYWNLSTSKLLTMEFMDGAQVNDVDKIRKLGIQPYEVSKL 306
Score = 50.8 bits (120), Expect(3) = e-115
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = +2
Query: 839 VTKAFAEMTFKHGFVHCDPHAANMLV 916
V++ FAEM FKHGFVHCDPHAAN++V
Sbjct: 307 VSQTFAEMMFKHGFVHCDPHAANLIV 332