BLASTX nr result
ID: Coptis24_contig00021190
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00021190
(881 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004145130.1| PREDICTED: 54S ribosomal protein L12, mitoch... 216 4e-54
ref|XP_003631242.1| PREDICTED: 50S ribosomal protein L7/L12-like... 211 1e-52
ref|XP_003635653.1| PREDICTED: 50S ribosomal protein L7/L12-like... 210 4e-52
ref|XP_002304265.1| predicted protein [Populus trichocarpa] gi|2... 206 6e-51
ref|XP_002533422.1| 50S ribosomal protein L7/L12, putative [Rici... 203 4e-50
>ref|XP_004145130.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like isoform 1
[Cucumis sativus] gi|449454778|ref|XP_004145131.1|
PREDICTED: 54S ribosomal protein L12, mitochondrial-like
isoform 2 [Cucumis sativus]
gi|449472279|ref|XP_004153545.1| PREDICTED: 54S
ribosomal protein L12, mitochondrial-like isoform 1
[Cucumis sativus] gi|449472282|ref|XP_004153546.1|
PREDICTED: 54S ribosomal protein L12, mitochondrial-like
isoform 2 [Cucumis sativus]
gi|449503353|ref|XP_004161960.1| PREDICTED: 54S
ribosomal protein L12, mitochondrial-like isoform 1
[Cucumis sativus] gi|449503355|ref|XP_004161961.1|
PREDICTED: 54S ribosomal protein L12, mitochondrial-like
isoform 2 [Cucumis sativus]
Length = 214
Score = 216 bits (551), Expect = 4e-54
Identities = 121/216 (56%), Positives = 151/216 (69%), Gaps = 10/216 (4%)
Frame = +1
Query: 109 MNSISKLGFRFSNGIFKNPNFLTSLISNPQKS----RNFSLPAK----EEELEMIDQRRL 264
M +S++ N +F N +++ NP RN++ P++ EEE+E IDQRRL
Sbjct: 1 MRLVSRISHLLPN-VFANTIRSSTVALNPLNRNGLHRNYAQPSRIEEEEEEVE-IDQRRL 58
Query: 265 PADYDPSNFNPTEHRSPPTDRVFRXXXXXXXXXXXXXXXFSSILMNKLATERAPIVGLMK 444
PADYDP+NF+PTEHRSPPTDRVFR SSILM KL P+ G MK
Sbjct: 59 PADYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAEMSSILMKKLGMTEMPVAGYMK 118
Query: 445 PSAV--VGMSAKGAGSVAKQEKKVEKTVFELKLESFEAASKIKIIKEVRSFTALGLKEAK 618
P AV GM KG+ + AK+EKK EKTV+ELKLES+EA++KIKIIKEVRS T LGLKEAK
Sbjct: 119 PGAVGLAGMVKKGSSATAKEEKKAEKTVYELKLESYEASAKIKIIKEVRSLTDLGLKEAK 178
Query: 619 DLVEKAPAVIKGGVSKEEGEHIIEKMKAIGAKVVME 726
DLV+KAP+V+K G+SKEEGE I+EKMKA+GAKV++E
Sbjct: 179 DLVDKAPSVLKKGLSKEEGEQIVEKMKALGAKVILE 214
>ref|XP_003631242.1| PREDICTED: 50S ribosomal protein L7/L12-like [Vitis vinifera]
Length = 206
Score = 211 bits (538), Expect = 1e-52
Identities = 113/168 (67%), Positives = 130/168 (77%), Gaps = 2/168 (1%)
Frame = +1
Query: 229 EEELEMIDQRRLPADYDPSNFNPTEHRSPPTDRVFRXXXXXXXXXXXXXXXFSSILMNKL 408
EEE+E IDQRRLPADYDP+NF+PT+HRSPPT RVFR SSIL KL
Sbjct: 40 EEEVE-IDQRRLPADYDPANFDPTQHRSPPTARVFRLVDEIAGLTLVEVAELSSILRKKL 98
Query: 409 ATERAPIVGLMKPSAVVGMSAKG--AGSVAKQEKKVEKTVFELKLESFEAASKIKIIKEV 582
+ P+V +MKP AV +S G A S AK+EKK EKTVFELKLES+EAASKIKIIKEV
Sbjct: 99 GMKEPPVVAIMKPGAVAAVSGGGMKAASAAKEEKKPEKTVFELKLESYEAASKIKIIKEV 158
Query: 583 RSFTALGLKEAKDLVEKAPAVIKGGVSKEEGEHIIEKMKAIGAKVVME 726
RSFT LGLKEAKDLVEKAP+V+K GVSKEEGE ++EK+KA+GAKVV+E
Sbjct: 159 RSFTDLGLKEAKDLVEKAPSVLKAGVSKEEGEQLVEKLKALGAKVVLE 206
>ref|XP_003635653.1| PREDICTED: 50S ribosomal protein L7/L12-like [Vitis vinifera]
Length = 206
Score = 210 bits (534), Expect = 4e-52
Identities = 112/168 (66%), Positives = 129/168 (76%), Gaps = 2/168 (1%)
Frame = +1
Query: 229 EEELEMIDQRRLPADYDPSNFNPTEHRSPPTDRVFRXXXXXXXXXXXXXXXFSSILMNKL 408
EEE+E IDQRRLPADYDP+NF+PT+HRSPPT RVFR SSIL KL
Sbjct: 40 EEEVE-IDQRRLPADYDPANFDPTQHRSPPTARVFRLVDEIAGLTLVEVAELSSILRKKL 98
Query: 409 ATERAPIVGLMKPSAVVGMSAKG--AGSVAKQEKKVEKTVFELKLESFEAASKIKIIKEV 582
+ P+V +MKP A +S G A S AK+EKK EKTVFELKLES+EAASKIKIIKEV
Sbjct: 99 GMKEPPVVAIMKPGAAAAVSGGGMKAASAAKEEKKPEKTVFELKLESYEAASKIKIIKEV 158
Query: 583 RSFTALGLKEAKDLVEKAPAVIKGGVSKEEGEHIIEKMKAIGAKVVME 726
RSFT LGLKEAKDLVEKAP+V+K GVSKEEGE ++EK+KA+GAKVV+E
Sbjct: 159 RSFTDLGLKEAKDLVEKAPSVLKAGVSKEEGEQLVEKLKALGAKVVLE 206
>ref|XP_002304265.1| predicted protein [Populus trichocarpa] gi|222841697|gb|EEE79244.1|
predicted protein [Populus trichocarpa]
Length = 216
Score = 206 bits (524), Expect = 6e-51
Identities = 120/216 (55%), Positives = 144/216 (66%), Gaps = 10/216 (4%)
Frame = +1
Query: 109 MNSISKLGFRFSNGIFKNPNF--LTSLISNPQKSRNFS-----LPAKEEELEMIDQRRLP 267
M+ IS+L NG P L L N SR F+ + A+EEE IDQRRLP
Sbjct: 1 MSLISRLRHCLPNGFSTKPTISPLMPLNFNAVLSRGFAEAARKVEAEEEEEVEIDQRRLP 60
Query: 268 ADYDPSNFNPTEHRSPPTDRVFRXXXXXXXXXXXXXXXFSSILMNKLATERAPIVGLMKP 447
DYDP+ F+PTEHRSPPT+RVF+ +I+M ++ P +G++K
Sbjct: 61 TDYDPATFDPTEHRSPPTERVFKLVEEIAGLTLMEISELGTIIMKRMKMTEPPTIGVLKG 120
Query: 448 SA--VVGMSAKG-AGSVAKQEKKVEKTVFELKLESFEAASKIKIIKEVRSFTALGLKEAK 618
A + GM+ K A + AK+EKK EKTVFELKLESFEAASKIK+IKEVRSFT LGLKEAK
Sbjct: 121 GAAGLAGMAMKAPAAAAAKEEKKAEKTVFELKLESFEAASKIKVIKEVRSFTDLGLKEAK 180
Query: 619 DLVEKAPAVIKGGVSKEEGEHIIEKMKAIGAKVVME 726
DLVEK P+V+K GVSKEEGE IIEKMKAIGAKVV+E
Sbjct: 181 DLVEKTPSVLKKGVSKEEGEQIIEKMKAIGAKVVLE 216
>ref|XP_002533422.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
gi|223526735|gb|EEF28965.1| 50S ribosomal protein
L7/L12, putative [Ricinus communis]
Length = 301
Score = 203 bits (517), Expect = 4e-50
Identities = 109/169 (64%), Positives = 127/169 (75%), Gaps = 2/169 (1%)
Frame = +1
Query: 226 KEEELEMIDQRRLPADYDPSNFNPTEHRSPPTDRVFRXXXXXXXXXXXXXXXFSSILMNK 405
+EEE+E IDQRRLPADYDP+ F+PTEHRSPPT+RVF+ SSI+M K
Sbjct: 134 EEEEVE-IDQRRLPADYDPATFDPTEHRSPPTERVFKLVDEVAGLTLVEVAELSSIIMKK 192
Query: 406 LATERAPIVGLMKPSA--VVGMSAKGAGSVAKQEKKVEKTVFELKLESFEAASKIKIIKE 579
P VG++K A + GM+ K + AK+EKK EKTVFELKLES+EAASKIKIIKE
Sbjct: 193 RGMTELPTVGVLKGGAAGLAGMAMKAPAAAAKEEKKPEKTVFELKLESYEAASKIKIIKE 252
Query: 580 VRSFTALGLKEAKDLVEKAPAVIKGGVSKEEGEHIIEKMKAIGAKVVME 726
VRSFT LGLKEAKDLVEK P+++K GVSKEE E IIEKMKA+GAKVVME
Sbjct: 253 VRSFTDLGLKEAKDLVEKTPSILKAGVSKEEAEQIIEKMKAVGAKVVME 301