BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021130
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40062.3| unnamed protein product [Vitis vinifera]              100   1e-19
ref|XP_003633786.1| PREDICTED: uncharacterized protein LOC100262...    90   2e-16
ref|NP_567435.4| Mitochondrial transcription termination factor ...    83   2e-14
ref|XP_004157856.1| PREDICTED: uncharacterized protein LOC101228...    83   3e-14
ref|XP_004142030.1| PREDICTED: uncharacterized protein LOC101203...    83   3e-14

>emb|CBI40062.3| unnamed protein product [Vitis vinifera]
          Length = 464

 Score =  100 bits (249), Expect = 1e-19
 Identities = 59/98 (60%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
 Frame = -2

Query: 293 RGPSSFLKTRICFPQQLHIFQANCVGESGVDAVH-NYRVVPSNLLXXXXXXXXAVLTLFF 117
           RGP S  + R  FP ++   QA    ESGVD    + RVVP +LL        AVL+LF 
Sbjct: 17  RGPFSIPRNRAYFPGKVSFCQAK-FAESGVDGSSISLRVVPPSLLAAEKEEAKAVLSLFL 75

Query: 116 KKQGLSNAVAARTINKSDLFIEHLVSKLHSVHKTRYLV 3
           KKQGLSNAVAARTINKS+LFI+HLVS+LHSVHK+RYLV
Sbjct: 76  KKQGLSNAVAARTINKSELFIDHLVSRLHSVHKSRYLV 113


>ref|XP_003633786.1| PREDICTED: uncharacterized protein LOC100262724 [Vitis vinifera]
          Length = 460

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 50/72 (69%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
 Frame = -2

Query: 215 ESGVDAVH-NYRVVPSNLLXXXXXXXXAVLTLFFKKQGLSNAVAARTINKSDLFIEHLVS 39
           ESGVD    + RVVP +LL        AVL+LF KKQGLSNAVAARTINKS+LFI+HLVS
Sbjct: 7   ESGVDGSSISLRVVPPSLLAAEKEEAKAVLSLFLKKQGLSNAVAARTINKSELFIDHLVS 66

Query: 38  KLHSVHKTRYLV 3
           +LHSVHK+RYLV
Sbjct: 67  RLHSVHKSRYLV 78


>ref|NP_567435.4| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|332658065|gb|AEE83465.1|
           Mitochondrial transcription termination factor family
           protein [Arabidopsis thaliana]
          Length = 493

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/61 (68%), Positives = 49/61 (80%)
 Frame = -2

Query: 185 RVVPSNLLXXXXXXXXAVLTLFFKKQGLSNAVAARTINKSDLFIEHLVSKLHSVHKTRYL 6
           R VP NL+        AVLTLFFKKQGLSN++++R INKSDLFI+HLVS+LHSVHK RYL
Sbjct: 53  RPVPPNLIAAEKEEAKAVLTLFFKKQGLSNSLSSRLINKSDLFIDHLVSRLHSVHKARYL 112

Query: 5   V 3
           V
Sbjct: 113 V 113


>ref|XP_004157856.1| PREDICTED: uncharacterized protein LOC101228690 [Cucumis sativus]
          Length = 469

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/82 (53%), Positives = 54/82 (65%)
 Frame = -2

Query: 248 QLHIFQANCVGESGVDAVHNYRVVPSNLLXXXXXXXXAVLTLFFKKQGLSNAVAARTINK 69
           Q  +F      +S +D   N +VV   LL        AVLTLF KKQGLSNA+AARTINK
Sbjct: 27  QRKLFSCRSRSDSEIDGSANLKVVSPALLTAEKEEAKAVLTLFLKKQGLSNAIAARTINK 86

Query: 68  SDLFIEHLVSKLHSVHKTRYLV 3
           SD FI+HL+ +LH +HK+RYLV
Sbjct: 87  SDSFIDHLLLRLHLIHKSRYLV 108


>ref|XP_004142030.1| PREDICTED: uncharacterized protein LOC101203240 [Cucumis sativus]
          Length = 566

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/82 (53%), Positives = 54/82 (65%)
 Frame = -2

Query: 248 QLHIFQANCVGESGVDAVHNYRVVPSNLLXXXXXXXXAVLTLFFKKQGLSNAVAARTINK 69
           Q  +F      +S +D   N +VV   LL        AVLTLF KKQGLSNA+AARTINK
Sbjct: 124 QRKLFSCRSRSDSEIDGSANLKVVSPALLTAEKEEAKAVLTLFLKKQGLSNAIAARTINK 183

Query: 68  SDLFIEHLVSKLHSVHKTRYLV 3
           SD FI+HL+ +LH +HK+RYLV
Sbjct: 184 SDSFIDHLLLRLHLIHKSRYLV 205