BLASTX nr result

ID: Coptis24_contig00021047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021047
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36843.1| unknown [Lotus japonicus]                              166   1e-39
ref|XP_002275073.1| PREDICTED: ubiquitin-like isoform 1 [Vitis v...   166   2e-39
ref|NP_001235450.1| uncharacterized protein LOC100527905 [Glycin...   164   7e-39
ref|XP_003627265.1| Autophagy-like protein [Medicago truncatula]...   164   7e-39
ref|NP_001236589.1| uncharacterized protein LOC100527733 [Glycin...   162   3e-38

>gb|AFK36843.1| unknown [Lotus japonicus]
          Length = 94

 Score =  166 bits (421), Expect = 1e-39
 Identities = 78/83 (93%), Positives = 82/83 (98%)
 Frame = +3

Query: 3   VVVHLRATGDAPILKQAKFKISGTDKFAKVIDFLRRQLHRDTLFVYVNSAFSPNPDELVI 182
           VVVHLRATGDAPILKQ+KFKI+GTDKFAKVIDFLRRQLHRDTLFVYVNSAFSPNPDEL+I
Sbjct: 12  VVVHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHRDTLFVYVNSAFSPNPDELII 71

Query: 183 DLYNNFGIDGKLVVNYACSMAWG 251
           DLYNNFG DGKL+VNYACSMAWG
Sbjct: 72  DLYNNFGFDGKLIVNYACSMAWG 94


>ref|XP_002275073.1| PREDICTED: ubiquitin-like isoform 1 [Vitis vinifera]
           gi|359482638|ref|XP_003632796.1| PREDICTED:
           ubiquitin-like isoform 2 [Vitis vinifera]
           gi|297743012|emb|CBI35879.3| unnamed protein product
           [Vitis vinifera]
          Length = 94

 Score =  166 bits (420), Expect = 2e-39
 Identities = 80/83 (96%), Positives = 81/83 (97%)
 Frame = +3

Query: 3   VVVHLRATGDAPILKQAKFKISGTDKFAKVIDFLRRQLHRDTLFVYVNSAFSPNPDELVI 182
           VVVHLRATGDAPILKQAKFKI GTDKFAKVI+FLRRQLHRDTLFVYVNSAFSPNPDELVI
Sbjct: 12  VVVHLRATGDAPILKQAKFKIPGTDKFAKVIEFLRRQLHRDTLFVYVNSAFSPNPDELVI 71

Query: 183 DLYNNFGIDGKLVVNYACSMAWG 251
           DLYNNFG DGKLVVNYACSMAWG
Sbjct: 72  DLYNNFGFDGKLVVNYACSMAWG 94


>ref|NP_001235450.1| uncharacterized protein LOC100527905 [Glycine max]
           gi|255633518|gb|ACU17117.1| unknown [Glycine max]
          Length = 94

 Score =  164 bits (415), Expect = 7e-39
 Identities = 78/83 (93%), Positives = 82/83 (98%)
 Frame = +3

Query: 3   VVVHLRATGDAPILKQAKFKISGTDKFAKVIDFLRRQLHRDTLFVYVNSAFSPNPDELVI 182
           VVVHLRATGDAPILKQ+KFKI+GTDKFAKVIDFLRRQLHR+TLFVYVNSAFSPNPDELVI
Sbjct: 12  VVVHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHRETLFVYVNSAFSPNPDELVI 71

Query: 183 DLYNNFGIDGKLVVNYACSMAWG 251
           DL+NNFG DGKLVVNYACSMAWG
Sbjct: 72  DLFNNFGFDGKLVVNYACSMAWG 94


>ref|XP_003627265.1| Autophagy-like protein [Medicago truncatula]
           gi|122187475|sp|Q1SF86.1|ATG12_MEDTR RecName:
           Full=Ubiquitin-like protein ATG12; AltName:
           Full=Autophagy-related protein 12; Short=APG12-like
           gi|355521287|gb|AET01741.1| Autophagy-like protein
           [Medicago truncatula]
          Length = 95

 Score =  164 bits (415), Expect = 7e-39
 Identities = 78/83 (93%), Positives = 82/83 (98%)
 Frame = +3

Query: 3   VVVHLRATGDAPILKQAKFKISGTDKFAKVIDFLRRQLHRDTLFVYVNSAFSPNPDELVI 182
           VVVHLRATGDAPILKQ+KFKI+GTDKFAKVIDFLRRQLHR++LFVYVNSAFSPNPDELVI
Sbjct: 13  VVVHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHRESLFVYVNSAFSPNPDELVI 72

Query: 183 DLYNNFGIDGKLVVNYACSMAWG 251
           DLYNNFG DGKLVVNYACSMAWG
Sbjct: 73  DLYNNFGFDGKLVVNYACSMAWG 95


>ref|NP_001236589.1| uncharacterized protein LOC100527733 [Glycine max]
           gi|255633072|gb|ACU16891.1| unknown [Glycine max]
          Length = 94

 Score =  162 bits (410), Expect = 3e-38
 Identities = 76/83 (91%), Positives = 81/83 (97%)
 Frame = +3

Query: 3   VVVHLRATGDAPILKQAKFKISGTDKFAKVIDFLRRQLHRDTLFVYVNSAFSPNPDELVI 182
           VVVHLRATGD PILKQ+KFKI+GTDKFAKVIDFLRRQLHR+TLFVY+NSAFSPNPDELVI
Sbjct: 12  VVVHLRATGDVPILKQSKFKIAGTDKFAKVIDFLRRQLHRETLFVYINSAFSPNPDELVI 71

Query: 183 DLYNNFGIDGKLVVNYACSMAWG 251
           DL+NNFG DGKLVVNYACSMAWG
Sbjct: 72  DLFNNFGFDGKLVVNYACSMAWG 94


Top