BLASTX nr result

ID: Coptis24_contig00020692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020692
         (1230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277967.1| PREDICTED: uncharacterized protein LOC100267...   342   1e-91
emb|CBI32668.3| unnamed protein product [Vitis vinifera]              306   5e-81
ref|XP_002322830.1| predicted protein [Populus trichocarpa] gi|2...   288   1e-75
ref|XP_002308480.1| predicted protein [Populus trichocarpa] gi|2...   286   1e-74
ref|XP_002881505.1| hypothetical protein ARALYDRAFT_482732 [Arab...   280   5e-73

>ref|XP_002277967.1| PREDICTED: uncharacterized protein LOC100267054 [Vitis vinifera]
          Length = 351

 Score =  342 bits (877), Expect = 1e-91
 Identities = 185/353 (52%), Positives = 243/353 (68%), Gaps = 25/353 (7%)
 Frame = -3

Query: 1201 MESMARISQKNPLINLTTQNTLPLFPKPIS-FTFKP----------FTKPLKLTSTY--H 1061
            MES+A++ Q+   ++L+  +  P F +PIS F+F+           F +     S++  H
Sbjct: 1    MESLAKLHQRQQPLHLSLYDHRPSFSRPISSFSFRTSSSSSTSKSLFVRASSSPSSFSRH 60

Query: 1060 HP----QIPKNPFSS-----FLKTTCITLVTSTLFITQFNNKPSLAVQTQPPLVETTKEE 908
             P    Q PK+PF       F K +CI +  + +F  +FN KP +A       VE  K+ 
Sbjct: 61   SPTQDHQNPKSPFFETLLPHFFKASCIAIAAAAVFFARFNVKPVIAAPAAT--VEPFKQS 118

Query: 907  SVDT--DEDKERVFQEYLDTHPDDLKALKGLMEVKIKTRKFEEAIAVIDRLIGIQPFEKE 734
            ++D+  DE+KER  +EY+++HPDD++ LK LMEVKIK RK +EA+ VI+RLI ++P +KE
Sbjct: 119  TMDSVSDEEKERTVEEYVESHPDDVEGLKSLMEVKIKNRKLQEAVDVIERLIQLEPDDKE 178

Query: 733  WVLLKAHVYSYSGDIEMAKFAFEQLLGEDPLFVEAYHGLVMVTSLLGEG-ELEDVMKKIE 557
            W LLKAH+YSYSG+ E+AK  FE++L  +PL VEAYHGLVM  S    G EL  V+K+IE
Sbjct: 179  WPLLKAHLYSYSGESELAKLGFEEILSANPLTVEAYHGLVMAVSQSDSGDELNQVLKRIE 238

Query: 556  SAINXXXXXXXXXXXXXXXXLVAQVRVVEGKYTDALKVYEELVKDEPRDFRPYLCQGIIY 377
            +A+                 LVAQ+RV+EGKY DALKVY+ELVK+EPRDFRPYLCQGIIY
Sbjct: 239  AAMERCKKEKKKEDLRDFKLLVAQIRVIEGKYNDALKVYQELVKEEPRDFRPYLCQGIIY 298

Query: 376  TLLKRTDEAEKQFQKYRRLVPKGHPYARYFEDNMIATKIFSQMAENQRTGSMS 218
            TLL++ DEAEKQFQKYRRLVPKGHPYARYF+DNMIAT++FSQMAENQR+GS S
Sbjct: 299  TLLRKKDEAEKQFQKYRRLVPKGHPYARYFDDNMIATRVFSQMAENQRSGSKS 351


>emb|CBI32668.3| unnamed protein product [Vitis vinifera]
          Length = 314

 Score =  306 bits (785), Expect = 5e-81
 Identities = 167/326 (51%), Positives = 221/326 (67%), Gaps = 5/326 (1%)
 Frame = -3

Query: 1201 MESMARISQKNPLINLTTQNTLPLFPKPIS-FTFKPFTKPLKLTSTYHHPQIPKNPFSSF 1025
            MES+A++ Q+   ++L+  +  P F +PIS F+F+  +      S +       + FS  
Sbjct: 1    MESLAKLHQRQQPLHLSLYDHRPSFSRPISSFSFRTSSSSSTSKSLFVRASSSPSSFSP- 59

Query: 1024 LKTTCITLVTSTLFITQFNNKPSLAVQTQPPLVETTKEESVDT--DEDKERVFQEYLDTH 851
                      + +F  +FN KP +A       VE  K+ ++D+  DE+KER  +EY+++H
Sbjct: 60   ---------AAAVFFARFNVKPVIAAPAAT--VEPFKQSTMDSVSDEEKERTVEEYVESH 108

Query: 850  PDDLKALKGLMEVKIKTRKFEEAIAVIDRLIGIQPFEKEWVLLKAHVYSYSGDIEMAKFA 671
            PDD++ LK LMEVKIK RK +EA+ VI+RLI ++P +KEW LLKAH+YSYSG+ E+AK  
Sbjct: 109  PDDVEGLKSLMEVKIKNRKLQEAVDVIERLIQLEPDDKEWPLLKAHLYSYSGESELAKLG 168

Query: 670  FEQLLGEDPLFVEAYHGLVMVTSLLGEG-ELEDVMKKIESAINXXXXXXXXXXXXXXXXL 494
            FE++L  +PL VEAYHGLVM  S    G EL  V+K+IE+A+                 L
Sbjct: 169  FEEILSANPLTVEAYHGLVMAVSQSDSGDELNQVLKRIEAAMERCKKEKKKEDLRDFKLL 228

Query: 493  VAQVRVVEGKYTDALKVYEELVKDEPRDFRPYLCQGIIYTLLKRTDEAEKQFQKYRRLVP 314
            VAQ+RV+EGKY DALKVY+ELVK+EPRDFRPYLCQGIIYTLL++ DEAEKQFQKYRRLVP
Sbjct: 229  VAQIRVIEGKYNDALKVYQELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFQKYRRLVP 288

Query: 313  KGHPYARYFEDNMIAT-KIFSQMAEN 239
            KGHPYARYF+DNMIAT KI  ++ EN
Sbjct: 289  KGHPYARYFDDNMIATRKIEKKIEEN 314


>ref|XP_002322830.1| predicted protein [Populus trichocarpa] gi|222867460|gb|EEF04591.1|
            predicted protein [Populus trichocarpa]
          Length = 340

 Score =  288 bits (738), Expect = 1e-75
 Identities = 168/342 (49%), Positives = 223/342 (65%), Gaps = 18/342 (5%)
 Frame = -3

Query: 1201 MESMARISQKNPLINLTTQNTLPLFPKPI-SFTFKP----FTKPLKLTSTYHHPQ----- 1052
            MES+A++  ++   NL+     P FPKPI S +FK      + P KL+ST          
Sbjct: 1    MESVAKLHCRHQPFNLSLNPHRPSFPKPIISLSFKTPPPSSSSPFKLSSTSIRASSSSSS 60

Query: 1051 ----IPKNPFSSFLKTTCITLVTST-LFITQFNNKPSLAVQ-TQPPLVETTKEESVD--T 896
                + KN   + +K T ITL  +  LF T+ N KP++A   T    V+ T+E S +  +
Sbjct: 61   RITPLNKN-LGTIIKITSITLTAAAALFFTRLNIKPAIASPLTASSTVDPTEESSKENVS 119

Query: 895  DEDKERVFQEYLDTHPDDLKALKGLMEVKIKTRKFEEAIAVIDRLIGIQPFEKEWVLLKA 716
             E++ER  Q+YL  +P+D++AL+ LMEV+IK++K  EAI V+DRLI ++P E EW LLK+
Sbjct: 120  YEEQERALQDYLSQNPNDIEALRSLMEVRIKSKKLVEAIEVVDRLIELEPNEDEWPLLKS 179

Query: 715  HVYSYSGDIEMAKFAFEQLLGEDPLFVEAYHGLVMVTSLLGEGELEDVMKKIESAINXXX 536
             +Y+YSGD E AK  FE +L +DPL VEAYHGLVM  S  G G LE V+K+IESA++   
Sbjct: 180  QIYTYSGDFESAKDGFEAILKKDPLRVEAYHGLVMANSESG-GSLEVVLKRIESAMDKCK 238

Query: 535  XXXXXXXXXXXXXLVAQVRVVEGKYTDALKVYEELVKDEPRDFRPYLCQGIIYTLLKRTD 356
                         LVAQVRV+E KY DALKVYEELVK+EPRDFRPYLCQGIIYTLL++ D
Sbjct: 239  KEKKTSDLRDFKLLVAQVRVMEEKYLDALKVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 298

Query: 355  EAEKQFQKYRRLVPKGHPYARYFEDNMIATKIFSQMAENQRT 230
            EAEK+F+++++LVPK HPY  Y  DNM ATK FS   E +R+
Sbjct: 299  EAEKKFEQFKKLVPKNHPYREYLVDNMFATKFFSDKVERERS 340


>ref|XP_002308480.1| predicted protein [Populus trichocarpa] gi|222854456|gb|EEE92003.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score =  286 bits (731), Expect = 1e-74
 Identities = 165/334 (49%), Positives = 220/334 (65%), Gaps = 14/334 (4%)
 Frame = -3

Query: 1201 MESMARISQKNPLINLTTQNTLPLFPKPI-SFTFK---PFTKPLKLTSTYHHPQIPK--- 1043
            MES+A    K PL NL+     P FP PI S TFK   P + P KL+++       +   
Sbjct: 1    MESIA----KQPL-NLSLNPHRPSFPNPIVSLTFKTPPPSSSPFKLSTSIRASSSSRITP 55

Query: 1042 --NPFSSFLKTTCITLVTST-LFITQFNNKPSLA--VQTQPPLVETTKEESVD--TDEDK 884
                 ++ +KTT ITL  +  LF T+FN+KP++A  V       + TKE S +  + E++
Sbjct: 56   LNQSLTTIIKTTSITLTAAAVLFFTRFNSKPAIASPVAASSSTADPTKESSKENVSFEEQ 115

Query: 883  ERVFQEYLDTHPDDLKALKGLMEVKIKTRKFEEAIAVIDRLIGIQPFEKEWVLLKAHVYS 704
            ER  Q++L  +P D++AL+ LMEV+IK++K +EAI V+DRLI ++P E EW LLK+ +Y+
Sbjct: 116  ERALQDHLAQNPSDVEALRSLMEVRIKSKKLQEAIEVVDRLIELEPNEDEWPLLKSQIYT 175

Query: 703  YSGDIEMAKFAFEQLLGEDPLFVEAYHGLVMVTSLLGEGELEDVMKKIESAINXXXXXXX 524
            YSGD E AK  FE +L +DPL VEAYHGLVM  S  G G LE V+K+IESA+N       
Sbjct: 176  YSGDFESAKDGFEAVLQKDPLRVEAYHGLVMANSESG-GSLEVVLKRIESAMNKCKKEKK 234

Query: 523  XXXXXXXXXLVAQVRVVEGKYTDALKVYEELVKDEPRDFRPYLCQGIIYTLLKRTDEAEK 344
                     L+AQVRV+E KY DALKVYEELVK+EPRDFRPYLCQG+IYTLL++ DEAEK
Sbjct: 235  NSDLRDFKLLIAQVRVMEEKYFDALKVYEELVKEEPRDFRPYLCQGMIYTLLRKKDEAEK 294

Query: 343  QFQKYRRLVPKGHPYARYFEDNMIATKIFSQMAE 242
            +F+++++LVPK HPY  Y  +NM AT  FS+  E
Sbjct: 295  KFEQFKKLVPKNHPYREYLVENMFATNFFSEKVE 328


>ref|XP_002881505.1| hypothetical protein ARALYDRAFT_482732 [Arabidopsis lyrata subsp.
            lyrata] gi|297327344|gb|EFH57764.1| hypothetical protein
            ARALYDRAFT_482732 [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score =  280 bits (716), Expect = 5e-73
 Identities = 157/335 (46%), Positives = 220/335 (65%), Gaps = 10/335 (2%)
 Frame = -3

Query: 1201 MESMARISQKNPLINLTTQNTLPLFPK-PISFTFKPF---TKPLKLTSTYHHPQIPKNPF 1034
            MES+ ++       +L+  +    FPK P SF+ +     T  LK  S        ++  
Sbjct: 1    MESLGKLHLHQQPNHLSFTHFSSSFPKTPSSFSLRSLPKSTSSLKCVSIKASSSKSQDSR 60

Query: 1033 SSFLKTTCITLVTST-LFITQFNNKPSLAVQTQ---PPLVETTKEESVD--TDEDKERVF 872
             SFLK+TC+T   +  LF+     KPS A+       P VE+ K+ +    + E++ER  
Sbjct: 61   LSFLKSTCVTFTAAAALFLVNLQLKPSPAIAAPVAATPSVESLKQSNNGDVSLEEEERSL 120

Query: 871  QEYLDTHPDDLKALKGLMEVKIKTRKFEEAIAVIDRLIGIQPFEKEWVLLKAHVYSYSGD 692
            +++L +HP+D++AL+ LMEV+IK+RK  EAI +IDRLI ++P EKEW +LKA+++SYSGD
Sbjct: 121  EDHLASHPEDVEALRSLMEVRIKSRKLIEAIELIDRLIELEPEEKEWPILKANIFSYSGD 180

Query: 691  IEMAKFAFEQLLGEDPLFVEAYHGLVMVTSLLGEGELEDVMKKIESAINXXXXXXXXXXX 512
            +E AK  FE++L +DPL V+AYHGLVM  S  G  +L  V ++IE A+            
Sbjct: 181  LESAKTGFEEILVKDPLRVDAYHGLVMAYSDSG-ADLNAVEERIEEAMVRCKKEKNRKDL 239

Query: 511  XXXXXLVAQVRVVEGKYTDALKVYEELVKDEPRDFRPYLCQGIIYTLLKRTDEAEKQFQK 332
                 LVAQ+RV+EGK+ +ALK+YEELVK+EPRDFRPYLCQGIIYT+LK+ DEAEKQF+K
Sbjct: 240  RDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFRPYLCQGIIYTVLKKQDEAEKQFEK 299

Query: 331  YRRLVPKGHPYARYFEDNMIATKIFSQMAENQRTG 227
            +RRLVPK HPY  YF DNM+ATK+F++ A+ +  G
Sbjct: 300  FRRLVPKNHPYREYFMDNMVATKLFAEKAQREMAG 334


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