BLASTX nr result
ID: Coptis24_contig00020653
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020653 (201 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002329692.1| argonaute protein group [Populus trichocarpa... 62 5e-08 dbj|BAG12806.1| argonaute1 [Daucus carota] 62 6e-08 ref|XP_004137387.1| PREDICTED: protein argonaute 1A-like [Cucumi... 61 1e-07 gb|ABC61503.1| AGO1-2, partial [Nicotiana benthamiana] 61 1e-07 gb|AFV15377.1| AGO1A [Solanum lycopersicum] gi|409893066|gb|AFV4... 61 1e-07 >ref|XP_002329692.1| argonaute protein group [Populus trichocarpa] gi|222870600|gb|EEF07731.1| argonaute protein group [Populus trichocarpa] Length = 682 Score = 62.0 bits (149), Expect = 5e-08 Identities = 30/31 (96%), Positives = 30/31 (96%) Frame = -2 Query: 200 RGVRVEVTHRGNMRRKYRIFGLTSQATRELT 108 RGVRVEVTHRGNMRRKYRI GLTSQATRELT Sbjct: 50 RGVRVEVTHRGNMRRKYRISGLTSQATRELT 80 >dbj|BAG12806.1| argonaute1 [Daucus carota] Length = 1107 Score = 61.6 bits (148), Expect = 6e-08 Identities = 29/31 (93%), Positives = 30/31 (96%) Frame = -2 Query: 200 RGVRVEVTHRGNMRRKYRIFGLTSQATRELT 108 RGV+VEVTHRGNMRRKYRI GLTSQATRELT Sbjct: 481 RGVKVEVTHRGNMRRKYRIIGLTSQATRELT 511 >ref|XP_004137387.1| PREDICTED: protein argonaute 1A-like [Cucumis sativus] gi|449523970|ref|XP_004168996.1| PREDICTED: protein argonaute 1A-like [Cucumis sativus] Length = 1064 Score = 60.8 bits (146), Expect = 1e-07 Identities = 29/31 (93%), Positives = 30/31 (96%) Frame = -2 Query: 200 RGVRVEVTHRGNMRRKYRIFGLTSQATRELT 108 RGV+VEVTHRGNMRRKYRI GLTSQATRELT Sbjct: 434 RGVKVEVTHRGNMRRKYRISGLTSQATRELT 464 >gb|ABC61503.1| AGO1-2, partial [Nicotiana benthamiana] Length = 979 Score = 60.8 bits (146), Expect = 1e-07 Identities = 29/31 (93%), Positives = 30/31 (96%) Frame = -2 Query: 200 RGVRVEVTHRGNMRRKYRIFGLTSQATRELT 108 RGV+VEVTHRGNMRRKYRI GLTSQATRELT Sbjct: 346 RGVKVEVTHRGNMRRKYRISGLTSQATRELT 376 >gb|AFV15377.1| AGO1A [Solanum lycopersicum] gi|409893066|gb|AFV46190.1| argonaute1-1, partial [Solanum lycopersicum] Length = 1054 Score = 60.8 bits (146), Expect = 1e-07 Identities = 29/31 (93%), Positives = 30/31 (96%) Frame = -2 Query: 200 RGVRVEVTHRGNMRRKYRIFGLTSQATRELT 108 RGV+VEVTHRGNMRRKYRI GLTSQATRELT Sbjct: 422 RGVKVEVTHRGNMRRKYRISGLTSQATRELT 452