BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020650
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]              88   6e-16
emb|CAN79251.1| hypothetical protein VITISV_038223 [Vitis vinifera]    84   9e-15
emb|CAN62410.1| hypothetical protein VITISV_018838 [Vitis vinifera]    84   2e-14
emb|CAN60518.1| hypothetical protein VITISV_022537 [Vitis vinifera]    84   2e-14
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]                82   3e-14

>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 50/125 (40%), Positives = 68/125 (54%)
 Frame = +3

Query: 12  SSNEAEYEAVIAGLRMAEDLGVKELTVYSDSNLVVRQANGGFTTRCPRMARYLKVLHERS 191
           S+NEAEYEA+IAGLR+A+ +G KE+  Y DS LVV Q NG +  +  RM  YL+V  + S
Sbjct: 489 SNNEAEYEALIAGLRLAQGVGAKEILAYCDSQLVVNQFNGDYEAKDSRMEAYLEVAKDLS 548

Query: 192 SRFVKLRFVHLGHGENKHADALGYVAAAIPGSEERTIRVGRLERPSTEEVIEVCQITEEE 371
             F K   + +  GEN  ADAL  +A+      +R I V  +   S ++  E   IT   
Sbjct: 549 KNFSKFELIRILRGENTTADALAALASTSDPGLKRVIPVECISERSIQDNKETLVITRSR 608

Query: 372 GGWMD 386
               D
Sbjct: 609 AAARD 613


>emb|CAN79251.1| hypothetical protein VITISV_038223 [Vitis vinifera]
          Length = 665

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 4/136 (2%)
 Frame = +3

Query: 12  SSNEAEYEAVIAGLRMAEDLGVKELTVYSDSNLVVRQANGGFTTRCPRMARYLKVLHERS 191
           S+NEAEYEA+++GL +A  L + +L VYSDS L+VR     +  +  R+ARYL  + +  
Sbjct: 469 SNNEAEYEAILSGLDLALALSISKLKVYSDSQLIVRHVQKEYEAKDARIARYLTKVRDTL 528

Query: 192 SRFVKLRFVHLGHGENKHADALGYVAAAIPGSEERTIRVGRLERPSTEEVIEVCQITE-- 365
            RF +     +   EN+HADAL  +AA++P  E   + +     PS  E    C   E  
Sbjct: 529 QRFTEWTIEKIRRTENRHADALAGIAASLPIKEAILLPIHVQTNPSVAET-STCNTIEAS 587

Query: 366 --EEGGWMDPIKHFLE 407
             +  GW + I  +L+
Sbjct: 588 QADNQGWTNSITEYLQ 603


>emb|CAN62410.1| hypothetical protein VITISV_018838 [Vitis vinifera]
          Length = 890

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 51/135 (37%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
 Frame = +3

Query: 12  SSNEAEYEAVIAGLRMAEDLGVKELTVYSDSNLVVRQANGGFTTRCPRMARYLKVLHERS 191
           S+NEAEYEA+++GL +A  L V +L VYSDS LVVR     +  +  RMARYL  + +  
Sbjct: 394 SNNEAEYEAILSGLDLALALSVSKLRVYSDSQLVVRHVQKEYEAKDARMARYLTKVRDTL 453

Query: 192 SRFVKLRFVHLGHGENKHADALGYVAAAIPGSEERTIRVGRLERPSTEEVIEVCQITE-- 365
            RF +     +   EN  ADAL  +AA++P  E   + +     PS  E    C   E  
Sbjct: 454 HRFTEWTIEKIRRTENGRADALAGIAASLPIKEAILLLIHVQTNPSVAET-STCNTIEAS 512

Query: 366 --EEGGWMDPIKHFL 404
             ++ GWM+ I  +L
Sbjct: 513 QADDQGWMNNITEYL 527


>emb|CAN60518.1| hypothetical protein VITISV_022537 [Vitis vinifera]
          Length = 1118

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 52/136 (38%), Positives = 73/136 (53%), Gaps = 5/136 (3%)
 Frame = +3

Query: 12  SSNEAEYEAVIAGLRMAEDLGVKELTVYSDSNLVVRQANGGFTTRCPRMARYLKVLHERS 191
           S+NEAEYEA+++GL +A  L V +L VYSDS LVVR     +  +  RMARYL  +    
Sbjct: 475 SNNEAEYEAILSGLDLALALSVSKLRVYSDSQLVVRHVQKEYEAKDARMARYLTKVRNTL 534

Query: 192 SRFVKLRFVHLGHGENKHADALGYVAAAIPGSEERTIRVGRLERPSTEE-----VIEVCQ 356
            RF +     +   EN  ADAL  +AA++P  E   + +     PS  E      IE  Q
Sbjct: 535 QRFTEWTIEKIRRTENGRADALAGIAASLPIKEVILLPIHVQTNPSVAETSTCNTIEASQ 594

Query: 357 ITEEEGGWMDPIKHFL 404
           + ++E  W + IK +L
Sbjct: 595 VDDQE--WTNNIKEYL 608


>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 49/132 (37%), Positives = 69/132 (52%)
 Frame = +3

Query: 9    TSSNEAEYEAVIAGLRMAEDLGVKELTVYSDSNLVVRQANGGFTTRCPRMARYLKVLHER 188
            TS+N+AEYEA+IAGL +A +L V  +T  SDS LVV Q  G +  R   + +Y   +   
Sbjct: 1365 TSNNQAEYEAIIAGLHLAIELEVTNITCKSDSRLVVGQLTGEYEVRETLLQQYFHFVKNL 1424

Query: 189  SSRFVKLRFVHLGHGENKHADALGYVAAAIPGSEERTIRVGRLERPSTEEVIEVCQITEE 368
             +RF ++ F H+    N  ADAL  +A        R+     L +PS     E C  T+ 
Sbjct: 1425 LNRFKEISFQHVRRENNTRADALSRLATLKKKGAHRSAIHVTLAKPSVG--TEECMATDT 1482

Query: 369  EGGWMDPIKHFL 404
            +  WM PIK +L
Sbjct: 1483 QPNWMTPIKQYL 1494