BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020589
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285331.1| PREDICTED: cytochrome c oxidase subunit 5b-2...    69   3e-10
gb|AFU52881.1| cytochrome C oxidase subunit Vb [Vitis vinifera]        69   4e-10
gb|AAC08397.1| cytochrome c oxidase subunit Vb precursor [Mesemb...    66   3e-09
ref|NP_001078161.1| cytochrome c oxidase subunit Vb [Arabidopsis...    64   1e-08
gb|AEQ61828.1| cytochrome c oxidase subunit Vb [Dimocarpus longan]     62   4e-08

>ref|XP_002285331.1| PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial [Vitis
           vinifera] gi|297743391|emb|CBI36258.3| unnamed protein
           product [Vitis vinifera]
          Length = 176

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 46/93 (49%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
 Frame = -2

Query: 275 MWRRFISNQVQTRTRSDLKHFNRSVSIAKHHILN--HQASSSPLYSPFLTTSSYAFSRQF 102
           MWR  +S Q+QT  RS      RS +     +    +++  SP  +PF  T+S  FSRQF
Sbjct: 1   MWRGRLSAQLQTLARS------RSAANLTRLVTGDINRSFISPSPAPFRRTASL-FSRQF 53

Query: 101 SSDS-DTGLSEGKKKVEDVMPIATGHEREELEA 6
           S++S D  +S+ KK+VEDVMPIATGHEREELEA
Sbjct: 54  SAESADNAVSKEKKRVEDVMPIATGHEREELEA 86


>gb|AFU52881.1| cytochrome C oxidase subunit Vb [Vitis vinifera]
          Length = 176

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 45/93 (48%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
 Frame = -2

Query: 275 MWRRFISNQVQTRTRSDLKHFNRSVSIAKHHILN--HQASSSPLYSPFLTTSSYAFSRQF 102
           MWR  +S Q+QT  RS      RS +     +    +++  SP  +PF  T+S  FSRQF
Sbjct: 1   MWRGRLSAQLQTLARS------RSAANLTRLVTGDINRSFISPSPAPFRRTASL-FSRQF 53

Query: 101 SSDS-DTGLSEGKKKVEDVMPIATGHEREELEA 6
           S++S D  +S+ KK++EDVMPIATGHEREELEA
Sbjct: 54  SAESADNAVSKEKKRIEDVMPIATGHEREELEA 86


>gb|AAC08397.1| cytochrome c oxidase subunit Vb precursor [Mesembryanthemum
           crystallinum]
          Length = 109

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 42/91 (46%), Positives = 53/91 (58%)
 Frame = -2

Query: 275 MWRRFISNQVQTRTRSDLKHFNRSVSIAKHHILNHQASSSPLYSPFLTTSSYAFSRQFSS 96
           MWRR + + ++T   S       S S +   I++  ASS    SP    SS  FSR F++
Sbjct: 1   MWRRLVLSNLKTLASS-------SSSSSSSSIVHRSASSIVRASPSFRPSSSIFSRHFAA 53

Query: 95  DSDTGLSEGKKKVEDVMPIATGHEREELEAE 3
            SD  +S   K+ EDVMPIATGHEREELEAE
Sbjct: 54  ASDNVVSS--KRPEDVMPIATGHEREELEAE 82


>ref|NP_001078161.1| cytochrome c oxidase subunit Vb [Arabidopsis thaliana]
           gi|332642186|gb|AEE75707.1| cytochrome c oxidase subunit
           Vb [Arabidopsis thaliana]
          Length = 175

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
 Frame = -2

Query: 275 MWRRFISNQVQTRTRSDLKHF-NRSVSIAKHHILNHQASSSPLYSPFLTTSSYAFSRQFS 99
           MWRR +S+Q++T     +     RS++     +  + A++    S     SS+   R+FS
Sbjct: 1   MWRRIVSSQLKTLAADVVAASPRRSIAATTRPVGFYLAANRSAIS----ASSFVIPRRFS 56

Query: 98  SDSDTGLSEGKKKVEDVMPIATGHEREELEAE 3
           SDS+T  +   KKVEDVMPIATGHE+EELEAE
Sbjct: 57  SDSETPAT---KKVEDVMPIATGHEKEELEAE 85


>gb|AEQ61828.1| cytochrome c oxidase subunit Vb [Dimocarpus longan]
          Length = 140

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/91 (45%), Positives = 50/91 (54%)
 Frame = -2

Query: 275 MWRRFISNQVQTRTRSDLKHFNRSVSIAKHHILNHQASSSPLYSPFLTTSSYAFSRQFSS 96
           MWRR  S+ ++      L H   + SIA     N   +S PL++          +R  SS
Sbjct: 1   MWRRICSSHLKALA---LSHSRSASSIAVSAAANRSLASPPLFT----------ARLLSS 47

Query: 95  DSDTGLSEGKKKVEDVMPIATGHEREELEAE 3
           DS T +   KKKVEDVMPIATGHEREEL AE
Sbjct: 48  DSGTSV---KKKVEDVMPIATGHEREELAAE 75