BLASTX nr result

ID: Coptis24_contig00020572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020572
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283202.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...   111   1e-22
emb|CAN68194.1| hypothetical protein VITISV_036221 [Vitis vinifera]   111   1e-22
ref|XP_002263941.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...   110   3e-22
emb|CAN71534.1| hypothetical protein VITISV_018182 [Vitis vinifera]   110   3e-22
ref|XP_003618131.1| FAR1-related protein [Medicago truncatula] g...   108   7e-22

>ref|XP_002283202.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 783

 Score =  111 bits (278), Expect = 1e-22
 Identities = 58/116 (50%), Positives = 75/116 (64%), Gaps = 3/116 (2%)
 Frame = -3

Query: 341 PYVGLEFETDEEAYNYYNRYAGRVGFSVRKYSKCNSHRTGDAIGRIFCCSLEGARDARSK 162
           PY G+EFE++E A  +YN YA RVGFS R  S   S R G  I R F C+ EG R+   K
Sbjct: 61  PYEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRSFVCAKEGFRNLNEK 120

Query: 161 PAEER--KRNRADTRTGCRARITIR-RKGDKWVVTGFSEEHNHNLVPPSKRHKLRS 3
             ++R  KR R  TR GC+A ++++ +   KWVV+GF++EHNH LVPP K H LRS
Sbjct: 121 RTKDREIKRPRTITRVGCKASLSVKIQDSGKWVVSGFTKEHNHELVPPDKVHCLRS 176


>emb|CAN68194.1| hypothetical protein VITISV_036221 [Vitis vinifera]
          Length = 841

 Score =  111 bits (278), Expect = 1e-22
 Identities = 58/116 (50%), Positives = 75/116 (64%), Gaps = 3/116 (2%)
 Frame = -3

Query: 341 PYVGLEFETDEEAYNYYNRYAGRVGFSVRKYSKCNSHRTGDAIGRIFCCSLEGARDARSK 162
           PY G+EFE++E A  +YN YA RVGFS R  S   S R G  I R F C+ EG R+   K
Sbjct: 61  PYEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRSFVCAKEGFRNLNEK 120

Query: 161 PAEER--KRNRADTRTGCRARITIR-RKGDKWVVTGFSEEHNHNLVPPSKRHKLRS 3
             ++R  KR R  TR GC+A ++++ +   KWVV+GF++EHNH LVPP K H LRS
Sbjct: 121 RTKDREIKRPRTITRVGCKASLSVKIQDSGKWVVSGFTKEHNHELVPPDKVHCLRS 176


>ref|XP_002263941.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 773

 Score =  110 bits (274), Expect = 3e-22
 Identities = 57/116 (49%), Positives = 73/116 (62%), Gaps = 3/116 (2%)
 Frame = -3

Query: 341 PYVGLEFETDEEAYNYYNRYAGRVGFSVRKYSKCNSHRTGDAIGRIFCCSLEGARDARSK 162
           PY G+EFE++E A  +YN YA RVGFS R      S R G  I R F C+ EG R  + K
Sbjct: 66  PYEGMEFESEEAAKAFYNSYARRVGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRVDKEK 125

Query: 161 PAEER--KRNRADTRTGCRARITIR-RKGDKWVVTGFSEEHNHNLVPPSKRHKLRS 3
           P  +   KR RA+TR GC+A + ++ +   +WVV+GF +EHNH LVPP K H LRS
Sbjct: 126 PGRDGRVKRPRAETRVGCKAMLVVKIQDSSRWVVSGFVKEHNHELVPPDKVHCLRS 181


>emb|CAN71534.1| hypothetical protein VITISV_018182 [Vitis vinifera]
          Length = 737

 Score =  110 bits (274), Expect = 3e-22
 Identities = 57/116 (49%), Positives = 73/116 (62%), Gaps = 3/116 (2%)
 Frame = -3

Query: 341 PYVGLEFETDEEAYNYYNRYAGRVGFSVRKYSKCNSHRTGDAIGRIFCCSLEGARDARSK 162
           PY G+EFE++E A  +YN YA RVGFS R      S R G  I R F C+ EG R  + K
Sbjct: 66  PYEGMEFESEEAAKAFYNSYARRVGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRVDKEK 125

Query: 161 PAEER--KRNRADTRTGCRARITIR-RKGDKWVVTGFSEEHNHNLVPPSKRHKLRS 3
           P  +   KR RA+TR GC+A + ++ +   +WVV+GF +EHNH LVPP K H LRS
Sbjct: 126 PGRDGRVKRPRAETRVGCKAMLVVKIQDSSRWVVSGFVKEHNHELVPPDKVHCLRS 181


>ref|XP_003618131.1| FAR1-related protein [Medicago truncatula]
           gi|355519466|gb|AET01090.1| FAR1-related protein
           [Medicago truncatula]
          Length = 786

 Score =  108 bits (271), Expect = 7e-22
 Identities = 65/164 (39%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
 Frame = -3

Query: 482 EADVRFSCFDGQDETNNHVEQVRKETNLETDSSKRPVDFVEEVYECCPYVGLEFETDEEA 303
           E + R    D +DE   + E+  +E   E D       +  E  +  P  G+EFE++E A
Sbjct: 17  EEEARIEMMD-EDEEEEYEEEEEEE---EDDDDGSGAVYFPEAGDLEPSEGMEFESEEAA 72

Query: 302 YNYYNRYAGRVGFSVRKYSKCNSHRTGDAIGRIFCCSLEGARDARSKPAEER--KRNRAD 129
             +YN YA RVGFS R  S   S R G  I R F C+ EG R+   K  ++R  KR R  
Sbjct: 73  KAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTV 132

Query: 128 TRTGCRARITIRR--KGDKWVVTGFSEEHNHNLVPPSKRHKLRS 3
           TR GC+A ++++      KW+V+GF  EHNH LVPP + H LRS
Sbjct: 133 TRVGCKASLSVKMHDSSAKWIVSGFVREHNHELVPPDQVHCLRS 176


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