BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020523
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281340.1| PREDICTED: uncharacterized protein LOC100245...   243   4e-62
ref|XP_002326517.1| predicted protein [Populus trichocarpa] gi|2...   238   2e-60
ref|XP_002519830.1| DNA binding protein, putative [Ricinus commu...   236   5e-60
ref|XP_002329567.1| predicted protein [Populus trichocarpa] gi|2...   236   6e-60
gb|AAK00433.1|AC060755_3 putative AT-Hook DNA-binding protein [O...   234   2e-59

>ref|XP_002281340.1| PREDICTED: uncharacterized protein LOC100245362 [Vitis vinifera]
           gi|297742130|emb|CBI33917.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score =  243 bits (621), Expect = 4e-62
 Identities = 146/284 (51%), Positives = 179/284 (63%), Gaps = 6/284 (2%)
 Frame = -1

Query: 904 TSSIIKPDCGLNMVSSEPVKRKRGRPRKYHGPDGGVVLALSP--LSSEAPNSKNGPNVSS 731
           +S+ ++P CG N+   EP K+KRGRPRKY  PDG + L L+P  + S A +       SS
Sbjct: 69  SSTGLRP-CGFNI---EPAKKKRGRPRKY-APDGNIALGLAPTPIPSTAAHGDATGTPSS 123

Query: 730 YKP--RNRKRP--TKKQQLDPFGSAGRGFMANVIVVKAGEDIASKIMAFSQQGPHTVCVL 563
             P  RNR RP  + K+QLD  G+AG GF  +VI V  GEDIASKIMAFSQQGP TVC+L
Sbjct: 124 EPPAKRNRGRPPGSGKKQLDALGAAGVGFTPHVITVNVGEDIASKIMAFSQQGPRTVCIL 183

Query: 562 SANGAVCNVTLRQPAMYGGTVSYEGRFEIISLSGSFLLMEXXXXXXXXXXXXXSLAGSDG 383
           SANGA+CNVTLRQPAM GGT+SYEGRF+IISLSGSFLL E             SLAGSDG
Sbjct: 184 SANGAICNVTLRQPAMSGGTISYEGRFDIISLSGSFLLSEDNGSRHRTGGLSVSLAGSDG 243

Query: 382 RILGGGVAGMLIAATPVQVVIGSFGAEENPMSELSLREPLLAPAPYMMSFGMPVAAVPPP 203
           R+LGGGVAGML AATPVQVV+GSF A +   +  +      AP   M++FG PV    P 
Sbjct: 244 RVLGGGVAGMLTAATPVQVVVGSFIA-DGKKTNTNQSGSSSAPPAQMLNFGAPVVPASPS 302

Query: 202 FPSTYSGSSDETGSPINFSSRACNDTEQSNQATYTYSSIGHANT 71
              +   S +  GSP+N      N+  Q       Y+++G  N+
Sbjct: 303 QGGSSESSDENGGSPLNRGPLPYNNVSQPIHQMPMYAAMGWPNS 346


>ref|XP_002326517.1| predicted protein [Populus trichocarpa] gi|222833839|gb|EEE72316.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  238 bits (606), Expect = 2e-60
 Identities = 143/256 (55%), Positives = 170/256 (66%), Gaps = 19/256 (7%)
 Frame = -1

Query: 862 SSEPVKRKRGRPRKYHGPDGGVVLALSP------LSSEAPNSKNG------PNVSSYKP- 722
           S EP K+KRGRPRKY  PDG + L LSP      +S+   +S  G      P+V+S  P 
Sbjct: 4   SIEPAKKKRGRPRKYT-PDGNIALGLSPTPIHSGMSAGQADSSGGAGSGVMPDVASEHPS 62

Query: 721 -RNRKRP--TKKQQLDPFGSAGR-GFMANVIVVKAGEDIASKIMAFSQQGPHTVCVLSAN 554
            ++R RP  + K+QLD  G  G  GF  +VI VKAGEDIASKIMAFSQQGP TVC+LSAN
Sbjct: 63  KKHRGRPPGSGKKQLDALGGTGGVGFTPHVITVKAGEDIASKIMAFSQQGPRTVCILSAN 122

Query: 553 GAVCNVTLRQPAMYGGTVSYEGRFEIISLSGSFLLMEXXXXXXXXXXXXXSLAGSDGRIL 374
           GA+CNVTLRQPAM GG+V+YEGRFEIISLSGSFLL E             SLAGSDGR+L
Sbjct: 123 GAICNVTLRQPAMSGGSVTYEGRFEIISLSGSFLLSESNGSRSRTGGLSVSLAGSDGRVL 182

Query: 373 GGGVAGMLIAATPVQVVIGSFGAEENPMSELSLRE-PLLAPAPYMMSFGMPVAAVPPPFP 197
           GGGVAGML AA+ VQV++GSF A+    +  SL+  P   P P M++FG P+    PP  
Sbjct: 183 GGGVAGMLTAASAVQVILGSFIADGKKSNSKSLKSGPSSTPPPQMLNFGAPLTTASPPSR 242

Query: 196 STYSGSSDET-GSPIN 152
              S SSDE  GSP+N
Sbjct: 243 GGSSESSDENGGSPVN 258


>ref|XP_002519830.1| DNA binding protein, putative [Ricinus communis]
           gi|223540876|gb|EEF42434.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 376

 Score =  236 bits (603), Expect = 5e-60
 Identities = 145/260 (55%), Positives = 172/260 (66%), Gaps = 23/260 (8%)
 Frame = -1

Query: 862 SSEPVKRKRGRPRKYHGPDGGVVLALSP--LSSEAPN-------SKNG-------PNVSS 731
           S +P K+KRGRPRKY  PDG + L LSP  +SS A +       S +G       P ++S
Sbjct: 89  SMDPAKKKRGRPRKYT-PDGNIALGLSPTPISSSATSLPPHVADSGSGVGVGIGTPAIAS 147

Query: 730 YKP--RNRKRP--TKKQQLDPFGSAGR-GFMANVIVVKAGEDIASKIMAFSQQGPHTVCV 566
             P  RNR RP  + K+QLD  G  G  GF  +VI VKAGEDIASKIMAFSQQGP TVC+
Sbjct: 148 DPPSKRNRGRPPGSGKKQLDALGGVGGVGFTPHVITVKAGEDIASKIMAFSQQGPRTVCI 207

Query: 565 LSANGAVCNVTLRQPAMYGGTVSYEGRFEIISLSGSFLLMEXXXXXXXXXXXXXSLAGSD 386
           LSANGA+CNVTLRQPAM GGTV+YEGR+EIISLSGSFLL E             SLAGSD
Sbjct: 208 LSANGAICNVTLRQPAMSGGTVTYEGRYEIISLSGSFLLSENNGNRSRSGGLSVSLAGSD 267

Query: 385 GRILGGGVAGMLIAATPVQVVIGSFGAE-ENPMSELSLREPLLAPAPYMMSFGMPVAAVP 209
           GR+LGGGVAGML+AA+PVQV++GSF A+ +   S +    P  AP   M++FG P+    
Sbjct: 268 GRVLGGGVAGMLMAASPVQVIVGSFIADGKKSNSNIHKSGPSSAPTSQMLNFGAPMTTSS 327

Query: 208 PPFPSTYSGSSDETG-SPIN 152
           PP     S SSDE G SP+N
Sbjct: 328 PPSQGVSSESSDENGSSPLN 347


>ref|XP_002329567.1| predicted protein [Populus trichocarpa] gi|222870276|gb|EEF07407.1|
           predicted protein [Populus trichocarpa]
          Length = 375

 Score =  236 bits (602), Expect = 6e-60
 Identities = 149/285 (52%), Positives = 180/285 (63%), Gaps = 16/285 (5%)
 Frame = -1

Query: 922 NGSCTTTSSIIKPDCGLNMVSSEPVKRKRGRPRKYHGPDGGVVLALSP------LSSEAP 761
           +GS  T+SS ++        S EP K+KRGRPRKY  PDG + L LSP      +S+   
Sbjct: 83  DGSSPTSSSGMR-------FSIEPAKKKRGRPRKYT-PDGNIALGLSPTPVPSGISAGHA 134

Query: 760 NSKNGP---NVSSYKP--RNRKRP--TKKQQLDPFGSAGR-GFMANVIVVKAGEDIASKI 605
           +S  G    + +S  P  +NR RP  + K+QLD  G  G  GF  +VI VKAGEDIASKI
Sbjct: 135 DSGGGGVTHDAASEHPSKKNRGRPPGSGKKQLDALGGVGGVGFTPHVITVKAGEDIASKI 194

Query: 604 MAFSQQGPHTVCVLSANGAVCNVTLRQPAMYGGTVSYEGRFEIISLSGSFLLMEXXXXXX 425
           MAFSQQGP TVC+LSANGA+CNVTLRQPAM GG+V+YEGRFEIISLSGSFLL E      
Sbjct: 195 MAFSQQGPRTVCILSANGAICNVTLRQPAMSGGSVTYEGRFEIISLSGSFLLSESNGSRS 254

Query: 424 XXXXXXXSLAGSDGRILGGGVAGMLIAATPVQVVIGSFGAE-ENPMSELSLREPLLAPAP 248
                  SLAGSDGR+LGGGVAGML AA+PVQV++GSF A+ +   S  S   P   P P
Sbjct: 255 RSGGLSVSLAGSDGRVLGGGVAGMLTAASPVQVIVGSFIADGKKSNSSASKSGPSSTPPP 314

Query: 247 YMMSFGMPVAAVPPPFPSTYSGSSDET-GSPINFSSRACNDTEQS 116
            M++F  P+    PP     S SSDE  GSP+N +     +  QS
Sbjct: 315 QMLNFSAPLTTASPPSQGGSSDSSDENGGSPVNRNPGIYGNPNQS 359


>gb|AAK00433.1|AC060755_3 putative AT-Hook DNA-binding protein [Oryza sativa Japonica Group]
            gi|110289621|gb|ABB48013.2| AT-hook protein 1, putative,
            expressed [Oryza sativa Japonica Group]
            gi|110289622|gb|ABB48012.2| AT-hook protein 1, putative,
            expressed [Oryza sativa Japonica Group]
            gi|125533038|gb|EAY79603.1| hypothetical protein
            OsI_34743 [Oryza sativa Indica Group]
          Length = 405

 Score =  234 bits (597), Expect = 2e-59
 Identities = 144/305 (47%), Positives = 177/305 (58%), Gaps = 29/305 (9%)
 Frame = -1

Query: 886  PDCGLNMVSSEPVKRKRGRPRKYHGPDGGVVLALSPLSSEAPNSKNGPNVSSYKP----- 722
            P  G  M   E +++KRGRPRKY  PDG + LAL+P+SS +  +   P    ++P     
Sbjct: 96   PQGGNVMGMGELMRKKRGRPRKY-APDGSMALALAPISSASGGAAPPPPPPGHQPHGFSI 154

Query: 721  ---------RNRKRPT---KKQQLDPFGSAGRGFMANVIVVKAGEDIASKIMAFSQQGPH 578
                     + R RP    KK+Q +  GS G  F  +++ VKAGED+ASKIMAFSQQGP 
Sbjct: 155  SSPASDPNAKRRGRPPGSGKKKQFEALGSWGIAFTPHILTVKAGEDVASKIMAFSQQGPR 214

Query: 577  TVCVLSANGAVCNVTLRQPAMYGGTVSYEGRFEIISLSGSFLLMEXXXXXXXXXXXXXSL 398
            TVC+LSANGA+ NVTLRQPA  GG V+YEGRFEIISLSGSFLL E             +L
Sbjct: 215  TVCILSANGAISNVTLRQPATSGGLVTYEGRFEIISLSGSFLLAEDGDTRSRTGGLSVAL 274

Query: 397  AGSDGRILGGGVAGMLIAATPVQVVIGSFGAEENPMSELSLREPLLAPAPYMMSFGMPVA 218
            AGSDGR+LGG VAGML+AATPVQVV+ SF AE      +  R+     AP  M+  +P  
Sbjct: 275  AGSDGRVLGGCVAGMLMAATPVQVVVASFIAEGKKSKPVETRKVEPMSAPPQMATYVPAP 334

Query: 217  AVPPPFPSTYSGSSDETGSPINFSSRACNDTEQSNQATY------TYSSIG------HAN 74
               PP   T SGSSD++GSPIN S    N + Q  Q          Y+S G      H N
Sbjct: 335  VASPPSEGTSSGSSDDSGSPINHSGMPYNHSGQQQQHQQHQHMPPAYASGGWSLSAHHQN 394

Query: 73   THSSN 59
             H S+
Sbjct: 395  RHDSD 399