BLASTX nr result

ID: Coptis24_contig00020497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020497
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324251.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23
ref|XP_002516583.1| hypothetical protein RCOM_0803370 [Ricinus c...   107   1e-21
emb|CBI20922.3| unnamed protein product [Vitis vinifera]              105   5e-21
emb|CAN69406.1| hypothetical protein VITISV_042543 [Vitis vinifera]   104   8e-21
gb|ADE77864.1| unknown [Picea sitchensis]                             103   1e-20

>ref|XP_002324251.1| predicted protein [Populus trichocarpa] gi|222865685|gb|EEF02816.1|
           predicted protein [Populus trichocarpa]
          Length = 542

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/112 (48%), Positives = 76/112 (67%)
 Frame = +3

Query: 3   YGGEAFAIFKSKQVAEMVLINLQKKCLMLDNGWPLVACVEAPRAHGKQAKHIGHLSIEKA 182
           + G+AF IF+ ++VAEM +  L + CLML NG PLV  + AP   GKQ+   GHL+I K 
Sbjct: 420 HSGQAFVIFQKREVAEMAVAKLDEVCLMLSNGRPLVGSIAAPCFPGKQSTFFGHLTINKL 479

Query: 183 LQKHRGEKRDAVSTSHFPQPNTIEYYMAVEWCQLQEQSELWWMELHKQHQRE 338
               + E ++AVSTSH  QPNT+EY MA+EWC LQ++S+L   +L +Q ++E
Sbjct: 480 RIHMQREMKEAVSTSHCSQPNTLEYDMAMEWCLLQDRSDLALRKLRQQQEQE 531


>ref|XP_002516583.1| hypothetical protein RCOM_0803370 [Ricinus communis]
           gi|223544403|gb|EEF45924.1| hypothetical protein
           RCOM_0803370 [Ricinus communis]
          Length = 730

 Score =  107 bits (267), Expect = 1e-21
 Identities = 53/112 (47%), Positives = 72/112 (64%)
 Frame = +3

Query: 3   YGGEAFAIFKSKQVAEMVLINLQKKCLMLDNGWPLVACVEAPRAHGKQAKHIGHLSIEKA 182
           + G+AFAIFK+++ AE  +  L + CLM   G PLV  +      GK + + GH+SI+K 
Sbjct: 606 HSGQAFAIFKTREAAETAVTKLDEGCLMTSYGRPLVGSIAKLSFPGKPSTYFGHMSIDKT 665

Query: 183 LQKHRGEKRDAVSTSHFPQPNTIEYYMAVEWCQLQEQSELWWMELHKQHQRE 338
             + +   R+AVSTSH  QPNTIEY MA+EWC LQEQ+   W  L+KQH +E
Sbjct: 666 RHQMQRVMREAVSTSHCSQPNTIEYDMALEWCFLQEQTNQEWELLYKQHGKE 717


>emb|CBI20922.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/112 (45%), Positives = 72/112 (64%)
 Frame = +3

Query: 3   YGGEAFAIFKSKQVAEMVLINLQKKCLMLDNGWPLVACVEAPRAHGKQAKHIGHLSIEKA 182
           + G+AF IFK++  A   +  L++ CL+L NG PLV     P   GKQ+  +GHLSI+K 
Sbjct: 506 HSGQAFVIFKTRDAAVSAIRKLEEGCLLLSNGRPLVGSFGTPCFPGKQSTFVGHLSIDKV 565

Query: 183 LQKHRGEKRDAVSTSHFPQPNTIEYYMAVEWCQLQEQSELWWMELHKQHQRE 338
             + + E + AVSTSH  QPNTIEY MA++WC  QE+S+  W +L+K+   E
Sbjct: 566 KVQMQREMKQAVSTSHCSQPNTIEYEMAMDWCLQQERSDSCWKKLYKRQGDE 617


>emb|CAN69406.1| hypothetical protein VITISV_042543 [Vitis vinifera]
          Length = 417

 Score =  104 bits (259), Expect = 8e-21
 Identities = 50/107 (46%), Positives = 70/107 (65%)
 Frame = +3

Query: 3   YGGEAFAIFKSKQVAEMVLINLQKKCLMLDNGWPLVACVEAPRAHGKQAKHIGHLSIEKA 182
           + G+AF IFK++  A   +  L++ CL+L NG PLV     P   GKQ+  +GHLSI+K 
Sbjct: 261 HSGQAFVIFKTRDAAVSAIRKLEEGCLLLSNGRPLVGSFGTPCFPGKQSTFVGHLSIDKV 320

Query: 183 LQKHRGEKRDAVSTSHFPQPNTIEYYMAVEWCQLQEQSELWWMELHK 323
             + + E + AVSTSH  QPNTIEY MA++WC  QE+S+  W +L+K
Sbjct: 321 KVQMQREMKQAVSTSHCSQPNTIEYEMAMDWCLQQERSDSCWKKLYK 367


>gb|ADE77864.1| unknown [Picea sitchensis]
          Length = 328

 Score =  103 bits (257), Expect = 1e-20
 Identities = 61/116 (52%), Positives = 76/116 (65%), Gaps = 6/116 (5%)
 Frame = +3

Query: 9   GEAFAIFKSKQVAEMVLINLQKKCLMLDNGWPLVAC-VEAPRAHGKQAKHIGHLSIEK-A 182
           GEAF IF++K+ A++V+  L +  LML +G PL+A    AP A GK  K  GH+ IEK  
Sbjct: 195 GEAFVIFRTKEGADIVVKKLDEAFLMLSDGRPLIATKATAPVASGKP-KFAGHICIEKHR 253

Query: 183 LQKHRGEK----RDAVSTSHFPQPNTIEYYMAVEWCQLQEQSELWWMELHKQHQRE 338
           LQ HR  +    R AVSTSH  QPNTIEY MA++W  LQE+SE WW EL+KQ   E
Sbjct: 254 LQLHRSHQMEDIRKAVSTSHCSQPNTIEYEMAMDWRLLQEKSECWWKELYKQENLE 309


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