BLASTX nr result

ID: Coptis24_contig00020453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020453
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635468.1| PREDICTED: uncharacterized protein LOC100852...    88   6e-16
ref|NP_001234539.1| histidine triad family protein [Solanum lyco...    87   1e-15
gb|ABK95845.1| unknown [Populus trichocarpa]                           85   7e-15
ref|XP_002863905.1| histidine triad family protein [Arabidopsis ...    81   8e-14
ref|XP_002533497.1| histidine triad (hit) protein, putative [Ric...    81   8e-14

>ref|XP_003635468.1| PREDICTED: uncharacterized protein LOC100852448, partial [Vitis
           vinifera] gi|296090671|emb|CBI41071.3| unnamed protein
           product [Vitis vinifera]
          Length = 102

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/72 (58%), Positives = 52/72 (72%)
 Frame = +1

Query: 1   DSFNVVSNNGGAAGQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGETDELAGSIRKQ 180
           DSFN++ NNG AAGQVIFHTH+HIIPRK  D LW SE+  R+ LKL  E  +LA  +R+Q
Sbjct: 23  DSFNLLVNNGAAAGQVIFHTHIHIIPRKARDCLWTSESLRRRTLKLDQEASQLADRVREQ 82

Query: 181 LSMNTSHEDVKD 216
           LS   + E+ KD
Sbjct: 83  LSFLNNAEESKD 94


>ref|NP_001234539.1| histidine triad family protein [Solanum lycopersicum]
           gi|51457954|gb|AAU03366.1| histidine triad family
           protein [Solanum lycopersicum]
          Length = 150

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/71 (61%), Positives = 54/71 (76%)
 Frame = +1

Query: 1   DSFNVVSNNGGAAGQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGETDELAGSIRKQ 180
           DSFN++ NNG AAGQVI+HTH+HIIPRK  D LW SET SR PLK S E  +LA  IR+ 
Sbjct: 72  DSFNLLVNNGAAAGQVIYHTHIHIIPRKASDCLWTSETLSRCPLK-SDEAQKLADGIREN 130

Query: 181 LSMNTSHEDVK 213
           LS++++ ED K
Sbjct: 131 LSISSNIEDSK 141


>gb|ABK95845.1| unknown [Populus trichocarpa]
          Length = 197

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/74 (56%), Positives = 52/74 (70%)
 Frame = +1

Query: 1   DSFNVVSNNGGAAGQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGETDELAGSIRKQ 180
           DSFN++ NNG AAGQVIFHTH+HIIPRK  D LW +E+  R+PL    E  +L   +R+Q
Sbjct: 124 DSFNLLVNNGAAAGQVIFHTHIHIIPRKARDCLWTTESLRRRPLNFDQEASQLVNRVREQ 183

Query: 181 LSMNTSHEDVKD*R 222
           LS + S ED KD R
Sbjct: 184 LS-SISPEDGKDSR 196


>ref|XP_002863905.1| histidine triad family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309740|gb|EFH40164.1| histidine triad family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 198

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/61 (60%), Positives = 45/61 (73%)
 Frame = +1

Query: 1   DSFNVVSNNGGAAGQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGETDELAGSIRKQ 180
           DSFN++ NNG AAGQVIFHTH+HIIPRK+ D LW SE+  R  LKL  E  +L   +R+Q
Sbjct: 126 DSFNLLVNNGAAAGQVIFHTHIHIIPRKERDCLWASESLRRHTLKLDKEASQLVSRVRQQ 185

Query: 181 L 183
           L
Sbjct: 186 L 186


>ref|XP_002533497.1| histidine triad (hit) protein, putative [Ricinus communis]
           gi|223526641|gb|EEF28884.1| histidine triad (hit)
           protein, putative [Ricinus communis]
          Length = 214

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 36/62 (58%), Positives = 45/62 (72%)
 Frame = +1

Query: 1   DSFNVVSNNGGAAGQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGETDELAGSIRKQ 180
           DSFN++ NNG AAGQVIFHTH+HIIPRK+ D LW SE+  R+PL       +L   +R+Q
Sbjct: 138 DSFNLLVNNGAAAGQVIFHTHIHIIPRKESDCLWTSESIQRRPLNFDHRASQLVNLVREQ 197

Query: 181 LS 186
           LS
Sbjct: 198 LS 199


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