BLASTX nr result
ID: Coptis24_contig00020453
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020453 (410 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635468.1| PREDICTED: uncharacterized protein LOC100852... 88 6e-16 ref|NP_001234539.1| histidine triad family protein [Solanum lyco... 87 1e-15 gb|ABK95845.1| unknown [Populus trichocarpa] 85 7e-15 ref|XP_002863905.1| histidine triad family protein [Arabidopsis ... 81 8e-14 ref|XP_002533497.1| histidine triad (hit) protein, putative [Ric... 81 8e-14 >ref|XP_003635468.1| PREDICTED: uncharacterized protein LOC100852448, partial [Vitis vinifera] gi|296090671|emb|CBI41071.3| unnamed protein product [Vitis vinifera] Length = 102 Score = 88.2 bits (217), Expect = 6e-16 Identities = 42/72 (58%), Positives = 52/72 (72%) Frame = +1 Query: 1 DSFNVVSNNGGAAGQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGETDELAGSIRKQ 180 DSFN++ NNG AAGQVIFHTH+HIIPRK D LW SE+ R+ LKL E +LA +R+Q Sbjct: 23 DSFNLLVNNGAAAGQVIFHTHIHIIPRKARDCLWTSESLRRRTLKLDQEASQLADRVREQ 82 Query: 181 LSMNTSHEDVKD 216 LS + E+ KD Sbjct: 83 LSFLNNAEESKD 94 >ref|NP_001234539.1| histidine triad family protein [Solanum lycopersicum] gi|51457954|gb|AAU03366.1| histidine triad family protein [Solanum lycopersicum] Length = 150 Score = 87.0 bits (214), Expect = 1e-15 Identities = 44/71 (61%), Positives = 54/71 (76%) Frame = +1 Query: 1 DSFNVVSNNGGAAGQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGETDELAGSIRKQ 180 DSFN++ NNG AAGQVI+HTH+HIIPRK D LW SET SR PLK S E +LA IR+ Sbjct: 72 DSFNLLVNNGAAAGQVIYHTHIHIIPRKASDCLWTSETLSRCPLK-SDEAQKLADGIREN 130 Query: 181 LSMNTSHEDVK 213 LS++++ ED K Sbjct: 131 LSISSNIEDSK 141 >gb|ABK95845.1| unknown [Populus trichocarpa] Length = 197 Score = 84.7 bits (208), Expect = 7e-15 Identities = 42/74 (56%), Positives = 52/74 (70%) Frame = +1 Query: 1 DSFNVVSNNGGAAGQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGETDELAGSIRKQ 180 DSFN++ NNG AAGQVIFHTH+HIIPRK D LW +E+ R+PL E +L +R+Q Sbjct: 124 DSFNLLVNNGAAAGQVIFHTHIHIIPRKARDCLWTTESLRRRPLNFDQEASQLVNRVREQ 183 Query: 181 LSMNTSHEDVKD*R 222 LS + S ED KD R Sbjct: 184 LS-SISPEDGKDSR 196 >ref|XP_002863905.1| histidine triad family protein [Arabidopsis lyrata subsp. lyrata] gi|297309740|gb|EFH40164.1| histidine triad family protein [Arabidopsis lyrata subsp. lyrata] Length = 198 Score = 81.3 bits (199), Expect = 8e-14 Identities = 37/61 (60%), Positives = 45/61 (73%) Frame = +1 Query: 1 DSFNVVSNNGGAAGQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGETDELAGSIRKQ 180 DSFN++ NNG AAGQVIFHTH+HIIPRK+ D LW SE+ R LKL E +L +R+Q Sbjct: 126 DSFNLLVNNGAAAGQVIFHTHIHIIPRKERDCLWASESLRRHTLKLDKEASQLVSRVRQQ 185 Query: 181 L 183 L Sbjct: 186 L 186 >ref|XP_002533497.1| histidine triad (hit) protein, putative [Ricinus communis] gi|223526641|gb|EEF28884.1| histidine triad (hit) protein, putative [Ricinus communis] Length = 214 Score = 81.3 bits (199), Expect = 8e-14 Identities = 36/62 (58%), Positives = 45/62 (72%) Frame = +1 Query: 1 DSFNVVSNNGGAAGQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGETDELAGSIRKQ 180 DSFN++ NNG AAGQVIFHTH+HIIPRK+ D LW SE+ R+PL +L +R+Q Sbjct: 138 DSFNLLVNNGAAAGQVIFHTHIHIIPRKESDCLWTSESIQRRPLNFDHRASQLVNLVREQ 197 Query: 181 LS 186 LS Sbjct: 198 LS 199