BLASTX nr result

ID: Coptis24_contig00020448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020448
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511182.1| nucleic acid binding protein, putative [Rici...   153   4e-35
ref|XP_002321705.1| predicted protein [Populus trichocarpa] gi|2...   150   3e-34
ref|XP_002318130.1| predicted protein [Populus trichocarpa] gi|2...   143   4e-32
ref|XP_002283829.1| PREDICTED: uncharacterized protein LOC100242...   143   4e-32
ref|XP_004138047.1| PREDICTED: uncharacterized protein LOC101213...   142   9e-32

>ref|XP_002511182.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223550297|gb|EEF51784.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 179

 Score =  153 bits (386), Expect = 4e-35
 Identities = 86/176 (48%), Positives = 111/176 (63%), Gaps = 13/176 (7%)
 Frame = +3

Query: 18  KENLRELQLLPVP------ISHQLSAWKSDSSESLSLKAGGTSNK-------PSVNXXXX 158
           +++ +ELQLLP         S  L +++   S SL  ++  T +        PS++    
Sbjct: 3   EDDHKELQLLPSQQSLASSSSCSLMSFRPPDSNSLRYRSSATVSADHNQFGGPSLDLQLS 62

Query: 159 XXXXXXXXXXNCSLAFPTSMYSYKEIDMSCVKALKWQAEEQIRLATAEREYAEQVREMTR 338
                     NC L  P   +S  ++D  CV+ALKWQA EQIRLA  E+ YAE+VRE+TR
Sbjct: 63  ISLSPIQAPSNCVLTGPICDFSDGKVDTGCVEALKWQAAEQIRLAAIEKAYAERVRELTR 122

Query: 339 REMELAQSELAQARIMWEKARGEVEKAERLKERATRQIGSTCMEITCQACWRRFSP 506
           REMELAQSE A+AR MW++AR E EKAER+KERATRQI STCMEITCQ+C +RF P
Sbjct: 123 REMELAQSEFARARHMWQRAREEAEKAERMKERATRQIDSTCMEITCQSCRQRFKP 178


>ref|XP_002321705.1| predicted protein [Populus trichocarpa] gi|222868701|gb|EEF05832.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  150 bits (379), Expect = 3e-34
 Identities = 85/169 (50%), Positives = 109/169 (64%), Gaps = 10/169 (5%)
 Frame = +3

Query: 30  RELQLLPVPISHQLSAWKSDSSES-LSLKAGGTSNK---------PSVNXXXXXXXXXXX 179
           +ELQLLP  +S   S+  S   +S L  K+   S+          PS++           
Sbjct: 7   KELQLLPSQLSIASSSSSSSLLDSSLRYKSSVVSDHHHHHNQFGGPSLDLQLSISVRPIQ 66

Query: 180 XXXNCSLAFPTSMYSYKEIDMSCVKALKWQAEEQIRLATAEREYAEQVREMTRREMELAQ 359
              NC L  P   +S  + D SCV+ALKWQA EQ++LA  E+ YAE+VR++TRREMELAQ
Sbjct: 67  AQSNCVLTGPICDFSDVKTDTSCVEALKWQAAEQVKLAAIEKAYAERVRDLTRREMELAQ 126

Query: 360 SELAQARIMWEKARGEVEKAERLKERATRQIGSTCMEITCQACWRRFSP 506
           SE A+AR MW++AR EVEKAER+KE+ATRQI STCMEITCQ+C +RF P
Sbjct: 127 SEFARARHMWQRAREEVEKAERMKEKATRQIDSTCMEITCQSCRQRFKP 175


>ref|XP_002318130.1| predicted protein [Populus trichocarpa] gi|222858803|gb|EEE96350.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  143 bits (360), Expect = 4e-32
 Identities = 86/176 (48%), Positives = 107/176 (60%), Gaps = 17/176 (9%)
 Frame = +3

Query: 30  RELQLLPVPISHQLSAWKSDSSESL--------SLKAGGTSNK---------PSVNXXXX 158
           +ELQLLP     QLS   S SS SL        SL+    ++          PS++    
Sbjct: 7   KELQLLP----SQLSIAASSSSSSLMSSRPMDSSLRYRPVASDHHQHHQFGGPSLDLQLS 62

Query: 159 XXXXXXXXXXNCSLAFPTSMYSYKEIDMSCVKALKWQAEEQIRLATAEREYAEQVREMTR 338
                     NC L  P   +S  + D SCV+ LKWQA EQI+LA  E+ YAE+VRE+TR
Sbjct: 63  ISVGPIQGPSNCVLTGPICDFSDAKTDTSCVETLKWQAAEQIKLAAIEKAYAERVRELTR 122

Query: 339 REMELAQSELAQARIMWEKARGEVEKAERLKERATRQIGSTCMEITCQACWRRFSP 506
           REMELAQSE A+AR MW++AR EVEKAE +KE+ATR+I STCMEITCQ+C +R  P
Sbjct: 123 REMELAQSEFAKARHMWQRAREEVEKAESMKEKATRKIDSTCMEITCQSCRQRLKP 178


>ref|XP_002283829.1| PREDICTED: uncharacterized protein LOC100242196 [Vitis vinifera]
           gi|147816564|emb|CAN68393.1| hypothetical protein
           VITISV_019529 [Vitis vinifera]
          Length = 169

 Score =  143 bits (360), Expect = 4e-32
 Identities = 83/167 (49%), Positives = 103/167 (61%), Gaps = 4/167 (2%)
 Frame = +3

Query: 18  KENLRELQLLPVP----ISHQLSAWKSDSSESLSLKAGGTSNKPSVNXXXXXXXXXXXXX 185
           +++ +ELQLLP P     S ++S   SDSS       G     P ++             
Sbjct: 3   EDDQKELQLLPSPHSMASSSRMSGRPSDSSLRYRGIGGDPFEGPGLDLQLSISLRPIRPP 62

Query: 186 XNCSLAFPTSMYSYKEIDMSCVKALKWQAEEQIRLATAEREYAEQVREMTRREMELAQSE 365
               LA     Y   + + SCV ALKWQA EQIRLA  E+ YAE+VRE+TRREMELAQSE
Sbjct: 63  PEYVLAGQICEYGDVKQEASCVDALKWQAAEQIRLAAMEKAYAERVRELTRREMELAQSE 122

Query: 366 LAQARIMWEKARGEVEKAERLKERATRQIGSTCMEITCQACWRRFSP 506
            A+AR MWE+A  EVEKAE++KE+A R+I STCMEITCQAC +RF P
Sbjct: 123 FARARHMWERAHEEVEKAEKMKEKAMRRIDSTCMEITCQACRQRFRP 169


>ref|XP_004138047.1| PREDICTED: uncharacterized protein LOC101213814 [Cucumis sativus]
           gi|449531703|ref|XP_004172825.1| PREDICTED:
           uncharacterized LOC101213814 [Cucumis sativus]
          Length = 175

 Score =  142 bits (357), Expect = 9e-32
 Identities = 84/172 (48%), Positives = 107/172 (62%), Gaps = 10/172 (5%)
 Frame = +3

Query: 21  ENLRELQLLPVPIS------HQLSAWKSDSSESLSLKAGGTSNKPSVNXXXXXXXXXXXX 182
           E+ +ELQLLP P S        +S+  SDSS SL  ++       S              
Sbjct: 4   EDQKELQLLPTPHSIASSSTSHISSRPSDSS-SLRFRSDPLFEAGSGGSVDLQLSISLRP 62

Query: 183 XXNCSLAFPTSMYSYKEI----DMSCVKALKWQAEEQIRLATAEREYAEQVREMTRREME 350
               +      ++ Y+E+      SCV ALKWQA EQIRLA  E+ YAE+VRE+T+RE+E
Sbjct: 63  IRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTKREIE 122

Query: 351 LAQSELAQARIMWEKARGEVEKAERLKERATRQIGSTCMEITCQACWRRFSP 506
           LAQ+E A+AR MWE+AR EVEKAER+KERATRQ+ STCMEITCQ+C +RF P
Sbjct: 123 LAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRP 174


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