BLASTX nr result
ID: Coptis24_contig00020448
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020448 (732 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002511182.1| nucleic acid binding protein, putative [Rici... 153 4e-35 ref|XP_002321705.1| predicted protein [Populus trichocarpa] gi|2... 150 3e-34 ref|XP_002318130.1| predicted protein [Populus trichocarpa] gi|2... 143 4e-32 ref|XP_002283829.1| PREDICTED: uncharacterized protein LOC100242... 143 4e-32 ref|XP_004138047.1| PREDICTED: uncharacterized protein LOC101213... 142 9e-32 >ref|XP_002511182.1| nucleic acid binding protein, putative [Ricinus communis] gi|223550297|gb|EEF51784.1| nucleic acid binding protein, putative [Ricinus communis] Length = 179 Score = 153 bits (386), Expect = 4e-35 Identities = 86/176 (48%), Positives = 111/176 (63%), Gaps = 13/176 (7%) Frame = +3 Query: 18 KENLRELQLLPVP------ISHQLSAWKSDSSESLSLKAGGTSNK-------PSVNXXXX 158 +++ +ELQLLP S L +++ S SL ++ T + PS++ Sbjct: 3 EDDHKELQLLPSQQSLASSSSCSLMSFRPPDSNSLRYRSSATVSADHNQFGGPSLDLQLS 62 Query: 159 XXXXXXXXXXNCSLAFPTSMYSYKEIDMSCVKALKWQAEEQIRLATAEREYAEQVREMTR 338 NC L P +S ++D CV+ALKWQA EQIRLA E+ YAE+VRE+TR Sbjct: 63 ISLSPIQAPSNCVLTGPICDFSDGKVDTGCVEALKWQAAEQIRLAAIEKAYAERVRELTR 122 Query: 339 REMELAQSELAQARIMWEKARGEVEKAERLKERATRQIGSTCMEITCQACWRRFSP 506 REMELAQSE A+AR MW++AR E EKAER+KERATRQI STCMEITCQ+C +RF P Sbjct: 123 REMELAQSEFARARHMWQRAREEAEKAERMKERATRQIDSTCMEITCQSCRQRFKP 178 >ref|XP_002321705.1| predicted protein [Populus trichocarpa] gi|222868701|gb|EEF05832.1| predicted protein [Populus trichocarpa] Length = 175 Score = 150 bits (379), Expect = 3e-34 Identities = 85/169 (50%), Positives = 109/169 (64%), Gaps = 10/169 (5%) Frame = +3 Query: 30 RELQLLPVPISHQLSAWKSDSSES-LSLKAGGTSNK---------PSVNXXXXXXXXXXX 179 +ELQLLP +S S+ S +S L K+ S+ PS++ Sbjct: 7 KELQLLPSQLSIASSSSSSSLLDSSLRYKSSVVSDHHHHHNQFGGPSLDLQLSISVRPIQ 66 Query: 180 XXXNCSLAFPTSMYSYKEIDMSCVKALKWQAEEQIRLATAEREYAEQVREMTRREMELAQ 359 NC L P +S + D SCV+ALKWQA EQ++LA E+ YAE+VR++TRREMELAQ Sbjct: 67 AQSNCVLTGPICDFSDVKTDTSCVEALKWQAAEQVKLAAIEKAYAERVRDLTRREMELAQ 126 Query: 360 SELAQARIMWEKARGEVEKAERLKERATRQIGSTCMEITCQACWRRFSP 506 SE A+AR MW++AR EVEKAER+KE+ATRQI STCMEITCQ+C +RF P Sbjct: 127 SEFARARHMWQRAREEVEKAERMKEKATRQIDSTCMEITCQSCRQRFKP 175 >ref|XP_002318130.1| predicted protein [Populus trichocarpa] gi|222858803|gb|EEE96350.1| predicted protein [Populus trichocarpa] Length = 178 Score = 143 bits (360), Expect = 4e-32 Identities = 86/176 (48%), Positives = 107/176 (60%), Gaps = 17/176 (9%) Frame = +3 Query: 30 RELQLLPVPISHQLSAWKSDSSESL--------SLKAGGTSNK---------PSVNXXXX 158 +ELQLLP QLS S SS SL SL+ ++ PS++ Sbjct: 7 KELQLLP----SQLSIAASSSSSSLMSSRPMDSSLRYRPVASDHHQHHQFGGPSLDLQLS 62 Query: 159 XXXXXXXXXXNCSLAFPTSMYSYKEIDMSCVKALKWQAEEQIRLATAEREYAEQVREMTR 338 NC L P +S + D SCV+ LKWQA EQI+LA E+ YAE+VRE+TR Sbjct: 63 ISVGPIQGPSNCVLTGPICDFSDAKTDTSCVETLKWQAAEQIKLAAIEKAYAERVRELTR 122 Query: 339 REMELAQSELAQARIMWEKARGEVEKAERLKERATRQIGSTCMEITCQACWRRFSP 506 REMELAQSE A+AR MW++AR EVEKAE +KE+ATR+I STCMEITCQ+C +R P Sbjct: 123 REMELAQSEFAKARHMWQRAREEVEKAESMKEKATRKIDSTCMEITCQSCRQRLKP 178 >ref|XP_002283829.1| PREDICTED: uncharacterized protein LOC100242196 [Vitis vinifera] gi|147816564|emb|CAN68393.1| hypothetical protein VITISV_019529 [Vitis vinifera] Length = 169 Score = 143 bits (360), Expect = 4e-32 Identities = 83/167 (49%), Positives = 103/167 (61%), Gaps = 4/167 (2%) Frame = +3 Query: 18 KENLRELQLLPVP----ISHQLSAWKSDSSESLSLKAGGTSNKPSVNXXXXXXXXXXXXX 185 +++ +ELQLLP P S ++S SDSS G P ++ Sbjct: 3 EDDQKELQLLPSPHSMASSSRMSGRPSDSSLRYRGIGGDPFEGPGLDLQLSISLRPIRPP 62 Query: 186 XNCSLAFPTSMYSYKEIDMSCVKALKWQAEEQIRLATAEREYAEQVREMTRREMELAQSE 365 LA Y + + SCV ALKWQA EQIRLA E+ YAE+VRE+TRREMELAQSE Sbjct: 63 PEYVLAGQICEYGDVKQEASCVDALKWQAAEQIRLAAMEKAYAERVRELTRREMELAQSE 122 Query: 366 LAQARIMWEKARGEVEKAERLKERATRQIGSTCMEITCQACWRRFSP 506 A+AR MWE+A EVEKAE++KE+A R+I STCMEITCQAC +RF P Sbjct: 123 FARARHMWERAHEEVEKAEKMKEKAMRRIDSTCMEITCQACRQRFRP 169 >ref|XP_004138047.1| PREDICTED: uncharacterized protein LOC101213814 [Cucumis sativus] gi|449531703|ref|XP_004172825.1| PREDICTED: uncharacterized LOC101213814 [Cucumis sativus] Length = 175 Score = 142 bits (357), Expect = 9e-32 Identities = 84/172 (48%), Positives = 107/172 (62%), Gaps = 10/172 (5%) Frame = +3 Query: 21 ENLRELQLLPVPIS------HQLSAWKSDSSESLSLKAGGTSNKPSVNXXXXXXXXXXXX 182 E+ +ELQLLP P S +S+ SDSS SL ++ S Sbjct: 4 EDQKELQLLPTPHSIASSSTSHISSRPSDSS-SLRFRSDPLFEAGSGGSVDLQLSISLRP 62 Query: 183 XXNCSLAFPTSMYSYKEI----DMSCVKALKWQAEEQIRLATAEREYAEQVREMTRREME 350 + ++ Y+E+ SCV ALKWQA EQIRLA E+ YAE+VRE+T+RE+E Sbjct: 63 IRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTKREIE 122 Query: 351 LAQSELAQARIMWEKARGEVEKAERLKERATRQIGSTCMEITCQACWRRFSP 506 LAQ+E A+AR MWE+AR EVEKAER+KERATRQ+ STCMEITCQ+C +RF P Sbjct: 123 LAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRP 174