BLASTX nr result

ID: Coptis24_contig00020445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020445
         (865 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237163.1| uncharacterized protein LOC100527004 [Glycin...   297   2e-78
ref|XP_003629220.1| hypothetical protein MTR_8g074720 [Medicago ...   295   7e-78
gb|ACJ85070.1| unknown [Medicago truncatula] gi|388501276|gb|AFK...   293   4e-77
ref|XP_002327717.1| predicted protein [Populus trichocarpa] gi|2...   287   2e-75
gb|AFX67009.1| hypothetical protein [Solanum tuberosum]               279   5e-73

>ref|NP_001237163.1| uncharacterized protein LOC100527004 [Glycine max]
           gi|255631350|gb|ACU16042.1| unknown [Glycine max]
          Length = 207

 Score =  297 bits (760), Expect = 2e-78
 Identities = 137/208 (65%), Positives = 166/208 (79%)
 Frame = +3

Query: 66  MVFLCWKRPSELDQKACINKCGTFNYDSKYRAATSKSFSSLQTDNSLSKDGFFLNQMRVL 245
           M+FL W RPS  DQK CINK GTFNYD KY+ AT+KS +SL+ D  LSKDGF LN+ RVL
Sbjct: 1   MLFLSWGRPSPQDQKTCINKSGTFNYDDKYKGATAKSVASLKADEGLSKDGFLLNEARVL 60

Query: 246 LGSGSHTYTNAKSALQSWKHFGLDWTFVDPKTRIETGTKFCVCVKEFLPWMMMPLQVEYV 425
           +GSG  T+   KSAL+SW+HFGL+W FVDPKT ++ G KFCVCVKEF PW+MMPLQV YV
Sbjct: 61  VGSGIETFEKGKSALRSWRHFGLNWAFVDPKTPVQQGVKFCVCVKEFFPWLMMPLQVVYV 120

Query: 426 NDIKQDSKKKLNASFQFGSGTLQGHLLSGEERFSIELDENNQVWYEILSFSKPAHLLSII 605
           N+    + K   ASF FGSGTL GHLL+GEERFSIE+DENNQVWYE+LSFSKPA +LS++
Sbjct: 121 NE--TGTAKYRTASFGFGSGTLHGHLLAGEERFSIEIDENNQVWYEVLSFSKPASILSLV 178

Query: 606 GYPYIQHRQKYFAQQSADALVKYVTAQK 689
           GYPY+  RQKYFA +SA A++K++ + K
Sbjct: 179 GYPYVMLRQKYFANESAKAMLKHINSSK 206


>ref|XP_003629220.1| hypothetical protein MTR_8g074720 [Medicago truncatula]
           gi|355523242|gb|AET03696.1| hypothetical protein
           MTR_8g074720 [Medicago truncatula]
          Length = 232

 Score =  295 bits (756), Expect = 7e-78
 Identities = 140/220 (63%), Positives = 170/220 (77%), Gaps = 3/220 (1%)
 Frame = +3

Query: 39  HRQN-KLV*KMVFLCWKRPSELDQKACINKCGTFNYDSKYRAATSKSFSSLQTDNSLSKD 215
           HRQN  ++ +MVFL W RP+  DQK CINK GT NYD KY+ A++KS SSL+ D  L  D
Sbjct: 14  HRQNYNIIVRMVFLSWVRPTAQDQKNCINKSGTLNYDDKYKGASAKSLSSLKEDKGLPND 73

Query: 216 GFFLNQMRVLLGSGSHTYTNAKSALQSWKHFGLDWTFVDPKTRIETGTKFCVCVKEFLPW 395
           GF LN  RVL+GSG  T+   KSAL+SW+HFG++W FVDPKT +E G KFCVCVKEFLPW
Sbjct: 74  GFLLNNARVLVGSGVETFEKGKSALRSWRHFGMNWAFVDPKTPVEQGAKFCVCVKEFLPW 133

Query: 396 MMMPLQVEYVNDIKQDSKKKLNASFQFGSGTLQGHLL--SGEERFSIELDENNQVWYEIL 569
           +MMPLQV YVN+    + K   ASF FGSGTLQGHLL  +GEERFS+E+DENNQVWYEIL
Sbjct: 134 LMMPLQVVYVNE--TSTTKNRGASFGFGSGTLQGHLLVAAGEERFSVEIDENNQVWYEIL 191

Query: 570 SFSKPAHLLSIIGYPYIQHRQKYFAQQSADALVKYVTAQK 689
           SFSKPAH+LS +GYPY+  RQKYFA +SA  ++K++ + K
Sbjct: 192 SFSKPAHVLSFVGYPYVMLRQKYFAHESAKVMLKHINSSK 231


>gb|ACJ85070.1| unknown [Medicago truncatula] gi|388501276|gb|AFK38704.1| unknown
           [Medicago truncatula]
          Length = 207

 Score =  293 bits (749), Expect = 4e-77
 Identities = 135/208 (64%), Positives = 163/208 (78%)
 Frame = +3

Query: 66  MVFLCWKRPSELDQKACINKCGTFNYDSKYRAATSKSFSSLQTDNSLSKDGFFLNQMRVL 245
           MVFL W RP+  DQK CINK GT NYD KY+ A++KS SSL+ D  L  DGF LN  RVL
Sbjct: 1   MVFLSWVRPTAQDQKNCINKSGTLNYDDKYKGASAKSLSSLKEDKGLPNDGFLLNNARVL 60

Query: 246 LGSGSHTYTNAKSALQSWKHFGLDWTFVDPKTRIETGTKFCVCVKEFLPWMMMPLQVEYV 425
           +GSG  T+   KSAL+SW+HFG++W FVDPKT +E G KFCVCVKEFLPW+MMPLQV YV
Sbjct: 61  VGSGVETFEKGKSALRSWRHFGMNWAFVDPKTPVEQGAKFCVCVKEFLPWLMMPLQVVYV 120

Query: 426 NDIKQDSKKKLNASFQFGSGTLQGHLLSGEERFSIELDENNQVWYEILSFSKPAHLLSII 605
           N+    + K   ASF FGSGTLQGHLL+GEERFS+E+DENNQVWYEILSFSKPAH+LS +
Sbjct: 121 NE--TSTTKNRGASFGFGSGTLQGHLLAGEERFSVEIDENNQVWYEILSFSKPAHVLSFV 178

Query: 606 GYPYIQHRQKYFAQQSADALVKYVTAQK 689
           GYP++  RQKYFA +SA  ++K++ + K
Sbjct: 179 GYPHVMLRQKYFAHESAKVMLKHINSSK 206


>ref|XP_002327717.1| predicted protein [Populus trichocarpa] gi|222836802|gb|EEE75195.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  287 bits (735), Expect = 2e-75
 Identities = 139/205 (67%), Positives = 162/205 (79%)
 Frame = +3

Query: 66  MVFLCWKRPSELDQKACINKCGTFNYDSKYRAATSKSFSSLQTDNSLSKDGFFLNQMRVL 245
           MVFLCW +PS  +QK C+NK   FNYDSKYR ATSK  SSL   N LSKDGF +N  RVL
Sbjct: 1   MVFLCWAKPSLQEQKDCLNKSDGFNYDSKYRGATSKHASSL---NELSKDGFLINHARVL 57

Query: 246 LGSGSHTYTNAKSALQSWKHFGLDWTFVDPKTRIETGTKFCVCVKEFLPWMMMPLQVEYV 425
           +GSG  TY   K AL++W+HFG DW FVD KT I +G KFCVCVKEFLPW+MMPLQ+ YV
Sbjct: 58  VGSGVETYEKGKLALENWRHFGFDWGFVDSKTPIRSGVKFCVCVKEFLPWVMMPLQIVYV 117

Query: 426 NDIKQDSKKKLNASFQFGSGTLQGHLLSGEERFSIELDENNQVWYEILSFSKPAHLLSII 605
           N+ +  S KK  ASF FG GTLQGHLL+GEERFSIE+DE NQVWYE+LSFSKPAH LS I
Sbjct: 118 NESR--SSKKDMASFCFGGGTLQGHLLAGEERFSIEMDEKNQVWYEVLSFSKPAHFLSFI 175

Query: 606 GYPYIQHRQKYFAQQSADALVKYVT 680
           GYPY+Q RQK+FA QS++A+VK+V+
Sbjct: 176 GYPYVQLRQKFFAHQSSNAVVKHVS 200


>gb|AFX67009.1| hypothetical protein [Solanum tuberosum]
          Length = 203

 Score =  279 bits (714), Expect = 5e-73
 Identities = 133/206 (64%), Positives = 160/206 (77%)
 Frame = +3

Query: 66  MVFLCWKRPSELDQKACINKCGTFNYDSKYRAATSKSFSSLQTDNSLSKDGFFLNQMRVL 245
           MVFL W RPS  +QKACINK G+FNYD+++R AT K    L+ D  L+KDGF +N  RVL
Sbjct: 1   MVFLSWTRPSPDEQKACINKSGSFNYDNRFRGATDKPAPLLKQDRELAKDGFSVNCARVL 60

Query: 246 LGSGSHTYTNAKSALQSWKHFGLDWTFVDPKTRIETGTKFCVCVKEFLPWMMMPLQVEYV 425
           +GSG  T+   K+ALQ+W+HFGL+W FVDPK  I++GTKFCVCVKEF PW+MMPLQV YV
Sbjct: 61  VGSGRETFEKGKAALQNWRHFGLNWAFVDPKAPIQSGTKFCVCVKEFFPWLMMPLQVVYV 120

Query: 426 NDIKQDSKKKLNASFQFGSGTLQGHLLSGEERFSIELDENNQVWYEILSFSKPAHLLSII 605
            + K     K+ ASF FGSGTLQGHLL+GEERFSI LDEN+ VWYEILSFSKPAHLLS+ 
Sbjct: 121 TENK---NSKMGASFSFGSGTLQGHLLAGEERFSIALDENDLVWYEILSFSKPAHLLSLF 177

Query: 606 GYPYIQHRQKYFAQQSADALVKYVTA 683
           GYPY+  RQKYFA  S  A+ K+++A
Sbjct: 178 GYPYVLLRQKYFAHHSGIAVKKHLSA 203