BLASTX nr result

ID: Coptis24_contig00020374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020374
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]    84   2e-14
ref|XP_002515544.1| conserved hypothetical protein [Ricinus comm...    80   2e-13
ref|XP_002324850.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
ref|XP_002513460.1| conserved hypothetical protein [Ricinus comm...    77   1e-12
ref|XP_002325303.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12

>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/80 (47%), Positives = 52/80 (65%)
 Frame = +2

Query: 2   EEVSEMFNKLGKGVITGSKPSHYYSLVQNVNGYCKEQWHVWNRILKRDYLDNPWTIISLG 181
           E VS +F KLGK V+  S    + +L ++VN Y K +WH+W   L+RDY +NPW IIS  
Sbjct: 354 EGVSHLFKKLGKEVVFNSDKFQFSNLCRDVNKYHKTRWHIWRATLRRDYFNNPWAIISFI 413

Query: 182 AAVFLLVCTCVQAVCSIISV 241
            AV LL  T +Q VCS++S+
Sbjct: 414 GAVLLLFFTLIQTVCSLLSL 433


>ref|XP_002515544.1| conserved hypothetical protein [Ricinus communis]
           gi|223545488|gb|EEF46993.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 439

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 38/83 (45%), Positives = 51/83 (61%)
 Frame = +2

Query: 5   EVSEMFNKLGKGVITGSKPSHYYSLVQNVNGYCKEQWHVWNRILKRDYLDNPWTIISLGA 184
           E S +FN L K ++  S   +Y  L +++N +CK +WH W   LK +Y + PWT IS+ A
Sbjct: 355 EASTLFNNLAKEILYDSHVFYYSLLCEDLNTFCKVRWHRWKATLKHNYFNTPWTAISVIA 414

Query: 185 AVFLLVCTCVQAVCSIISVLPKK 253
            V LLV T +QAVCSII V   K
Sbjct: 415 GVILLVLTFIQAVCSIIQVSGSK 437


>ref|XP_002324850.1| predicted protein [Populus trichocarpa] gi|222866284|gb|EEF03415.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/80 (46%), Positives = 51/80 (63%)
 Frame = +2

Query: 2   EEVSEMFNKLGKGVITGSKPSHYYSLVQNVNGYCKEQWHVWNRILKRDYLDNPWTIISLG 181
           E +S +F+ L K         ++  LV+ +N YC++ WH W   LK+ Y +NPW+IIS  
Sbjct: 331 EGMSALFHGLVKETFVIVDHFYFSGLVEELNAYCRKPWHKWQATLKQHYFNNPWSIISFI 390

Query: 182 AAVFLLVCTCVQAVCSIISV 241
           AAV LLV T +QAVCSI+SV
Sbjct: 391 AAVILLVLTTIQAVCSILSV 410


>ref|XP_002513460.1| conserved hypothetical protein [Ricinus communis]
           gi|223547368|gb|EEF48863.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 410

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/81 (43%), Positives = 51/81 (62%)
 Frame = +2

Query: 2   EEVSEMFNKLGKGVITGSKPSHYYSLVQNVNGYCKEQWHVWNRILKRDYLDNPWTIISLG 181
           E VS +F KL +  +      ++ SLV+ +N YCK  W+ W   LK+DY + PW +IS+ 
Sbjct: 329 EGVSTLFQKLEQENLLIPDDFYFSSLVEELNSYCKNPWNKWKATLKQDYFNTPWAVISVI 388

Query: 182 AAVFLLVCTCVQAVCSIISVL 244
           AA  LL+ T +Q+VCSI+ VL
Sbjct: 389 AAAILLILTVIQSVCSILQVL 409


>ref|XP_002325303.1| predicted protein [Populus trichocarpa] gi|222862178|gb|EEE99684.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/81 (45%), Positives = 48/81 (59%)
 Frame = +2

Query: 2   EEVSEMFNKLGKGVITGSKPSHYYSLVQNVNGYCKEQWHVWNRILKRDYLDNPWTIISLG 181
           E V+ +F  L K         +Y  LV+++N YC ++ H W   LK+ Y DNPWTIISL 
Sbjct: 358 EAVASLFRNLSKENTLAIDTFYYSGLVEDLNKYCGKRRHKWKATLKQKYFDNPWTIISLV 417

Query: 182 AAVFLLVCTCVQAVCSIISVL 244
           AA  LL+ T  Q VCSII V+
Sbjct: 418 AATVLLILTITQTVCSIIQVV 438


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