BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020255
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containi...   246   1e-63
emb|CBI32762.3| unnamed protein product [Vitis vinifera]              246   1e-63
ref|XP_002331139.1| predicted protein [Populus trichocarpa] gi|2...   242   3e-62
ref|XP_002515739.1| pentatricopeptide repeat-containing protein,...   234   5e-60
ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containi...   229   1e-58

>ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  246 bits (629), Expect = 1e-63
 Identities = 116/174 (66%), Positives = 147/174 (84%)
 Frame = -2

Query: 522 GKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHTY 343
           GKIEEA+RLFEEM E+GI+ D+YVYTS+I+ NCRSGN+KRA  LFDE+ ++GL  + HTY
Sbjct: 309 GKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTY 368

Query: 342 GALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMVN 163
           GAL++G+CK GQMEAA +L+NEMQ  GIDLN VIFNTLIDGYC  GM+DEA++LQ VM  
Sbjct: 369 GALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEK 428

Query: 162 KGIKADVYTYTTMASGLCKLKRADEAKELLITMVDKGVVPNMVSFSTLINIYCK 1
           KG+++DV+ Y ++ASGLCKL R DEAK LL +MV++GV PN +SF+TLI+IYCK
Sbjct: 429 KGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCK 482



 Score =  112 bits (279), Expect = 4e-23
 Identities = 59/170 (34%), Positives = 98/170 (57%)
 Frame = -2

Query: 522 GKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHTY 343
           G ++EA RL   M ++G++ D++ Y S+ +G C+      A  L   + ERG+S N  ++
Sbjct: 414 GMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSF 473

Query: 342 GALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMVN 163
             L++  CK G    A  +  EM+  G   N + +N LIDGY  +G + EA KL+D + N
Sbjct: 474 TTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELEN 533

Query: 162 KGIKADVYTYTTMASGLCKLKRADEAKELLITMVDKGVVPNMVSFSTLIN 13
           +G+  DVYT T++  G C   + D A +L   M  +G+VPN+V+++ +I+
Sbjct: 534 RGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMIS 583



 Score =  108 bits (269), Expect = 6e-22
 Identities = 57/174 (32%), Positives = 94/174 (54%)
 Frame = -2

Query: 522 GKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHTY 343
           G+++   R F  M    +++ +Y  T +++G C+ G+++    L DE+  +G+  NV TY
Sbjct: 204 GQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTY 263

Query: 342 GALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMVN 163
            A + G  K   +     +L  M+  G+  N V +  LI G+ N G I+EA +L + M  
Sbjct: 264 NAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMRE 323

Query: 162 KGIKADVYTYTTMASGLCKLKRADEAKELLITMVDKGVVPNMVSFSTLINIYCK 1
           KGI+ADVY YT++ S  C+      A  L   M DKG++P+  ++  LI+  CK
Sbjct: 324 KGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCK 377



 Score =  103 bits (257), Expect = 2e-20
 Identities = 59/166 (35%), Positives = 95/166 (57%)
 Frame = -2

Query: 513 EEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHTYGAL 334
           +EA+ L   M ERG+  +   +T++I+  C+ GN   A  +F E+ E+G   N+ TY  L
Sbjct: 452 DEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 511

Query: 333 LNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMVNKGI 154
           ++G  K G M+ A  L +E++  G+  +     +LI G C  G +D A+KL D M  +G+
Sbjct: 512 IDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGL 571

Query: 153 KADVYTYTTMASGLCKLKRADEAKELLITMVDKGVVPNMVSFSTLI 16
             +V TYT M SGL K  R++EA +L   M + G+ P+   +S+L+
Sbjct: 572 VPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617



 Score =  102 bits (255), Expect = 3e-20
 Identities = 52/175 (29%), Positives = 96/175 (54%)
 Frame = -2

Query: 525 RGKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHT 346
           RG +E   +L +E+  +G++ ++  Y + I G  +  +L     +   + + G++ NV T
Sbjct: 238 RGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVT 297

Query: 345 YGALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMV 166
           Y  L++G   +G++E A  L  EM+  GI+ +  ++ ++I   C  G +  A+ L D M 
Sbjct: 298 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 357

Query: 165 NKGIKADVYTYTTMASGLCKLKRADEAKELLITMVDKGVVPNMVSFSTLINIYCK 1
           +KG+    +TY  +  G+CK  + + A+ L+  M  KG+  N V F+TLI+ YC+
Sbjct: 358 DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCE 412



 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 50/137 (36%), Positives = 75/137 (54%)
 Frame = -2

Query: 522 GKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHTY 343
           G   EA+R+F EM E+G   +I  Y  +I+G  + GN+K A  L DEL  RGL  +V+T 
Sbjct: 484 GNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTC 543

Query: 342 GALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMVN 163
            +L++G C  G+++ A  L +EM   G+  N V +  +I G    G  +EA KL D M  
Sbjct: 544 TSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKE 603

Query: 162 KGIKADVYTYTTMASGL 112
            G+  D   Y+++   L
Sbjct: 604 TGLTPDDTVYSSLVGSL 620



 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/100 (41%), Positives = 66/100 (66%)
 Frame = -2

Query: 525 RGKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHT 346
           RG ++EA +L +E+  RG+  D+Y  TS+I+G C  G +  A  LFDE+P+RGL  NV T
Sbjct: 518 RGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVT 577

Query: 345 YGALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLI 226
           Y A+++GL K G+ E A  L +EM+  G+  +  ++++L+
Sbjct: 578 YTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617


>emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  246 bits (629), Expect = 1e-63
 Identities = 116/174 (66%), Positives = 147/174 (84%)
 Frame = -2

Query: 522 GKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHTY 343
           GKIEEA+RLFEEM E+GI+ D+YVYTS+I+ NCRSGN+KRA  LFDE+ ++GL  + HTY
Sbjct: 313 GKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTY 372

Query: 342 GALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMVN 163
           GAL++G+CK GQMEAA +L+NEMQ  GIDLN VIFNTLIDGYC  GM+DEA++LQ VM  
Sbjct: 373 GALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEK 432

Query: 162 KGIKADVYTYTTMASGLCKLKRADEAKELLITMVDKGVVPNMVSFSTLINIYCK 1
           KG+++DV+ Y ++ASGLCKL R DEAK LL +MV++GV PN +SF+TLI+IYCK
Sbjct: 433 KGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCK 486



 Score =  112 bits (279), Expect = 4e-23
 Identities = 59/170 (34%), Positives = 98/170 (57%)
 Frame = -2

Query: 522 GKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHTY 343
           G ++EA RL   M ++G++ D++ Y S+ +G C+      A  L   + ERG+S N  ++
Sbjct: 418 GMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSF 477

Query: 342 GALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMVN 163
             L++  CK G    A  +  EM+  G   N + +N LIDGY  +G + EA KL+D + N
Sbjct: 478 TTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELEN 537

Query: 162 KGIKADVYTYTTMASGLCKLKRADEAKELLITMVDKGVVPNMVSFSTLIN 13
           +G+  DVYT T++  G C   + D A +L   M  +G+VPN+V+++ +I+
Sbjct: 538 RGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMIS 587



 Score =  108 bits (269), Expect = 6e-22
 Identities = 57/174 (32%), Positives = 94/174 (54%)
 Frame = -2

Query: 522 GKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHTY 343
           G+++   R F  M    +++ +Y  T +++G C+ G+++    L DE+  +G+  NV TY
Sbjct: 208 GQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTY 267

Query: 342 GALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMVN 163
            A + G  K   +     +L  M+  G+  N V +  LI G+ N G I+EA +L + M  
Sbjct: 268 NAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMRE 327

Query: 162 KGIKADVYTYTTMASGLCKLKRADEAKELLITMVDKGVVPNMVSFSTLINIYCK 1
           KGI+ADVY YT++ S  C+      A  L   M DKG++P+  ++  LI+  CK
Sbjct: 328 KGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCK 381



 Score =  103 bits (257), Expect = 2e-20
 Identities = 59/166 (35%), Positives = 95/166 (57%)
 Frame = -2

Query: 513 EEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHTYGAL 334
           +EA+ L   M ERG+  +   +T++I+  C+ GN   A  +F E+ E+G   N+ TY  L
Sbjct: 456 DEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 515

Query: 333 LNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMVNKGI 154
           ++G  K G M+ A  L +E++  G+  +     +LI G C  G +D A+KL D M  +G+
Sbjct: 516 IDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGL 575

Query: 153 KADVYTYTTMASGLCKLKRADEAKELLITMVDKGVVPNMVSFSTLI 16
             +V TYT M SGL K  R++EA +L   M + G+ P+   +S+L+
Sbjct: 576 VPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 621



 Score =  102 bits (255), Expect = 3e-20
 Identities = 52/175 (29%), Positives = 96/175 (54%)
 Frame = -2

Query: 525 RGKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHT 346
           RG +E   +L +E+  +G++ ++  Y + I G  +  +L     +   + + G++ NV T
Sbjct: 242 RGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVT 301

Query: 345 YGALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMV 166
           Y  L++G   +G++E A  L  EM+  GI+ +  ++ ++I   C  G +  A+ L D M 
Sbjct: 302 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 361

Query: 165 NKGIKADVYTYTTMASGLCKLKRADEAKELLITMVDKGVVPNMVSFSTLINIYCK 1
           +KG+    +TY  +  G+CK  + + A+ L+  M  KG+  N V F+TLI+ YC+
Sbjct: 362 DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCE 416



 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 54/151 (35%), Positives = 81/151 (53%)
 Frame = -2

Query: 522 GKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHTY 343
           G   EA+R+F EM E+G   +I  Y  +I+G  + GN+K A  L DEL  RGL  +V+T 
Sbjct: 488 GNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTC 547

Query: 342 GALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMVN 163
            +L++G C  G+++ A  L +EM   G+  N V +  +I G    G  +EA KL D M  
Sbjct: 548 TSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKE 607

Query: 162 KGIKADVYTYTTMASGLCKLKRADEAKELLI 70
            G+  D   Y+++      L  ADE+  + I
Sbjct: 608 TGLTPDDTVYSSLVG---SLHSADESISMQI 635



 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 45/116 (38%), Positives = 73/116 (62%)
 Frame = -2

Query: 525 RGKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHT 346
           RG ++EA +L +E+  RG+  D+Y  TS+I+G C  G +  A  LFDE+P+RGL  NV T
Sbjct: 522 RGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVT 581

Query: 345 YGALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQ 178
           Y A+++GL K G+ E A  L +EM+  G+  +  ++++L+    +    DE+I +Q
Sbjct: 582 YTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHS---ADESISMQ 634



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/89 (32%), Positives = 54/89 (60%)
 Frame = -2

Query: 522 GKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHTY 343
           GK++ A +LF+EM +RG+  ++  YT+MI+G  + G  + AF L+DE+ E GL+ +   Y
Sbjct: 558 GKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVY 617

Query: 342 GALLNGLCKVGQMEAATILLNEMQINGID 256
            +L+  L    +  +  I  ++++ N +D
Sbjct: 618 SSLVGSLHSADESISMQIQGSQVKANKVD 646


>ref|XP_002331139.1| predicted protein [Populus trichocarpa] gi|222872867|gb|EEF09998.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  242 bits (617), Expect = 3e-62
 Identities = 113/176 (64%), Positives = 146/176 (82%)
 Frame = -2

Query: 528 SRGKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVH 349
           S GKI+E ER+FEEM E+GI+ DI+VYT +IN NC+ GN KRAFALFDEL E+GL  NVH
Sbjct: 13  SSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELTEKGLVANVH 72

Query: 348 TYGALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVM 169
           TYGAL++G+CK G+MEAA IL+NEMQ  G+D+NQ+I+NTLIDGYC +G+IDEA K+Q +M
Sbjct: 73  TYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIM 132

Query: 168 VNKGIKADVYTYTTMASGLCKLKRADEAKELLITMVDKGVVPNMVSFSTLINIYCK 1
             KG + D+YT  T+A GL KL + +EAK  L+TM++KGVVPN+VS++TLI+IYCK
Sbjct: 133 EKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCK 188



 Score =  101 bits (252), Expect = 6e-20
 Identities = 57/167 (34%), Positives = 98/167 (58%)
 Frame = -2

Query: 513 EEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHTYGAL 334
           EEA+R    M E+G+  ++  YT++I+  C+ GN   A  LF E+ + G   N  TY  L
Sbjct: 158 EEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVL 217

Query: 333 LNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMVNKGI 154
           ++G  K G+M+ A  L +EM+  GI  +   + +L+ G C  G +D+A++L + +  KG+
Sbjct: 218 IDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGL 277

Query: 153 KADVYTYTTMASGLCKLKRADEAKELLITMVDKGVVPNMVSFSTLIN 13
             +V TYT + SGL K  R++EA +L   M + G+ P+   +++L++
Sbjct: 278 PLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVS 324



 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 49/139 (35%), Positives = 82/139 (58%)
 Frame = -2

Query: 522 GKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHTY 343
           G   EA++LF+EM + G + +   Y  +I+G+ + G +K A+ L DE+  +G+  +++TY
Sbjct: 190 GNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTY 249

Query: 342 GALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMVN 163
            +LL+G C  G+++ A  L NE++  G+ LN V +  +I G   +G  +EA KL D M  
Sbjct: 250 TSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTE 309

Query: 162 KGIKADVYTYTTMASGLCK 106
            G+  D   YT++ S L K
Sbjct: 310 AGLTPDDRVYTSLVSSLHK 328



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/100 (40%), Positives = 65/100 (65%)
 Frame = -2

Query: 525 RGKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHT 346
           +G+++EA  L +EM  +GI  DIY YTS+++G C  G L  A  LF+E+ ++GL +NV T
Sbjct: 224 KGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVT 283

Query: 345 YGALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLI 226
           Y A+++GL K G+ E A  L +EM   G+  +  ++ +L+
Sbjct: 284 YTAIISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLV 323



 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 35/118 (29%), Positives = 61/118 (51%)
 Frame = -2

Query: 354 VHTYGALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQD 175
           V TY  L++     G+++    +  EM   GI  +  ++  +I+  C  G    A  L D
Sbjct: 1   VATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFD 60

Query: 174 VMVNKGIKADVYTYTTMASGLCKLKRADEAKELLITMVDKGVVPNMVSFSTLINIYCK 1
            +  KG+ A+V+TY  +  G+CK    + A+ L+  M  +G+  N + ++TLI+ YCK
Sbjct: 61  ELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCK 118


>ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545176|gb|EEF46686.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 613

 Score =  234 bits (598), Expect = 5e-60
 Identities = 110/176 (62%), Positives = 143/176 (81%)
 Frame = -2

Query: 528 SRGKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVH 349
           S GKI EAE++FE+M ERG++ DI+V+TS+I+  C+ GN+KRAFALFDEL ERGL  N H
Sbjct: 297 SSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAH 356

Query: 348 TYGALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVM 169
           TYGAL++G C  GQ++AA +L+NEMQ  G+D+N VIFNTLI+GYC KGMIDEA+++QDVM
Sbjct: 357 TYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVM 416

Query: 168 VNKGIKADVYTYTTMASGLCKLKRADEAKELLITMVDKGVVPNMVSFSTLINIYCK 1
             KG + D++TY T+A GLCKL R +EAK  L TMV+KGV PN VSF+ +I+I+CK
Sbjct: 417 EKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCK 472



 Score =  112 bits (279), Expect = 4e-23
 Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 35/205 (17%)
 Frame = -2

Query: 522 GKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHTY 343
           G+++ AE L  EM  +G+ M++ ++ ++ING C+ G +  A  + D + ++G   ++ TY
Sbjct: 369 GQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTY 428

Query: 342 GALLNGLCKVGQMEAATILLNEMQINGIDLNQVIF------------------------- 238
             +  GLCK+ + E A   L  M   G+D N V F                         
Sbjct: 429 NTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKK 488

Query: 237 ----------NTLIDGYCNKGMIDEAIKLQDVMVNKGIKADVYTYTTMASGLCKLKRADE 88
                     NTLIDGY  KG + EA +L+D M + G+ +D+YTYTT+  G C   + +E
Sbjct: 489 KGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEE 548

Query: 87  AKELLITMVDKGVVPNMVSFSTLIN 13
           A  LL  +  KG+  ++V+++ +I+
Sbjct: 549 ALTLLNEVCRKGLAISIVTYTAIIS 573



 Score =  100 bits (250), Expect = 1e-19
 Identities = 55/166 (33%), Positives = 96/166 (57%)
 Frame = -2

Query: 513 EEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHTYGAL 334
           EEA+R    M E+G+  +   +T MI+ +C+ GNL  A  +F ++ ++G   NV TY  L
Sbjct: 442 EEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTL 501

Query: 333 LNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMVNKGI 154
           ++G  K G+++ A  L +EM+  G+  +   + TL+ G C  G ++EA+ L + +  KG+
Sbjct: 502 IDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGL 561

Query: 153 KADVYTYTTMASGLCKLKRADEAKELLITMVDKGVVPNMVSFSTLI 16
              + TYT + SGL K  R++EA  L   M+  G+ P+   +++L+
Sbjct: 562 AISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLV 607



 Score = 97.8 bits (242), Expect = 9e-19
 Identities = 47/139 (33%), Positives = 85/139 (61%)
 Frame = -2

Query: 522 GKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHTY 343
           G + EAER+F++M ++G + ++  Y ++I+G  + G LK A+ L DE+   G++ +++TY
Sbjct: 474 GNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTY 533

Query: 342 GALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMVN 163
             L++G C  G++E A  LLNE+   G+ ++ V +  +I G   +G  +EA +L D M+ 
Sbjct: 534 TTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMA 593

Query: 162 KGIKADVYTYTTMASGLCK 106
            G+  D   YT++ + L K
Sbjct: 594 AGLTPDDRVYTSLVANLHK 612



 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 50/164 (30%), Positives = 91/164 (55%)
 Frame = -2

Query: 495 FEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHTYGALLNGLCK 316
           F++M E  + + +Y  T +I+G C+ G ++RA  L  E+  +G+  NV TY  L+N   K
Sbjct: 203 FKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIK 262

Query: 315 VGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMVNKGIKADVYT 136
           +   E    +L  M+++ +  N   +  LI+ Y + G I EA K+ + M+ +G++AD++ 
Sbjct: 263 IMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHV 322

Query: 135 YTTMASGLCKLKRADEAKELLITMVDKGVVPNMVSFSTLINIYC 4
           +T++ S  CKL     A  L   + ++G+V N  ++  LI+  C
Sbjct: 323 FTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTC 366



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 36/100 (36%), Positives = 65/100 (65%)
 Frame = -2

Query: 525 RGKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHT 346
           +GK++EA RL +EM   G+  DIY YT++++G C  G ++ A  L +E+  +GL++++ T
Sbjct: 508 KGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVT 567

Query: 345 YGALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLI 226
           Y A+++GL K G+ E A  L +EM   G+  +  ++ +L+
Sbjct: 568 YTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLV 607



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/134 (28%), Positives = 61/134 (45%)
 Frame = -2

Query: 408 KRAFALFDELPERGLSVNVHTYGALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTL 229
           +  F +FD +   GL ++  +    L  L +  QM  +     +M    +D+       +
Sbjct: 162 EEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIV 221

Query: 228 IDGYCNKGMIDEAIKLQDVMVNKGIKADVYTYTTMASGLCKLKRADEAKELLITMVDKGV 49
           IDG C KG ++ A  L   M  KGIK +V TY T+ +   K+   +   E+L  M    V
Sbjct: 222 IDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKV 281

Query: 48  VPNMVSFSTLINIY 7
           V N  +++ LI  Y
Sbjct: 282 VYNAATYTLLIEWY 295



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 35/108 (32%)
 Frame = -2

Query: 219 YCNKGMIDEAIKLQDVMVNKGIKAD----------------------------------- 145
           Y +  M +E  K+ D MV+ G+K D                                   
Sbjct: 155 YVDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVT 214

Query: 144 VYTYTTMASGLCKLKRADEAKELLITMVDKGVVPNMVSFSTLINIYCK 1
           VY+ T +  GLCK  R + AK+L++ M  KG+ PN+V+++TL+N Y K
Sbjct: 215 VYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIK 262


>ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  229 bits (585), Expect = 1e-58
 Identities = 104/173 (60%), Positives = 141/173 (81%)
 Frame = -2

Query: 519 KIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHTYG 340
           KIEEAE+LF+EM ++GI+ D+Y+YTS+IN NC+ GN+KRAF LFDE+ ER L  N +TYG
Sbjct: 273 KIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYG 332

Query: 339 ALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMVNK 160
           AL+NG CK G+M+AA +++N+MQ  G+D+N+VIFNTL+DGYC KGMIDEA++LQ++M  K
Sbjct: 333 ALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQK 392

Query: 159 GIKADVYTYTTMASGLCKLKRADEAKELLITMVDKGVVPNMVSFSTLINIYCK 1
           G + D +T   +ASG C+  R +EAK LL+TM ++GV PN+VSFS LI+IYCK
Sbjct: 393 GFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCK 445



 Score =  110 bits (276), Expect = 1e-22
 Identities = 60/174 (34%), Positives = 95/174 (54%)
 Frame = -2

Query: 522 GKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHTY 343
           G +E       +M + GI++ +  +T++++G C+ G + RA AL DEL  +G   +V TY
Sbjct: 167 GNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITY 226

Query: 342 GALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMVN 163
             LLNG  ++  +     +L+ M+ N +D N   +  LI+ Y     I+EA KL D M+ 
Sbjct: 227 NTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLK 286

Query: 162 KGIKADVYTYTTMASGLCKLKRADEAKELLITMVDKGVVPNMVSFSTLINIYCK 1
           KGI+ DVY YT++ +  CK      A  L   M ++ +VPN  ++  LIN  CK
Sbjct: 287 KGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACK 340



 Score =  108 bits (269), Expect = 6e-22
 Identities = 63/166 (37%), Positives = 97/166 (58%)
 Frame = -2

Query: 513 EEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHTYGAL 334
           EEA+RL   M ERG+  ++  ++ +I+  C+  N   A  LF  + ++G + +V TY A 
Sbjct: 415 EEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAF 474

Query: 333 LNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMVNKGI 154
           +   CK G+ME A  L+NEMQ  G+  +   + +LIDG    G +D A++L + M   G+
Sbjct: 475 IERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGL 534

Query: 153 KADVYTYTTMASGLCKLKRADEAKELLITMVDKGVVPNMVSFSTLI 16
             +V TYT + SGL K  RADEA +L   M  +G+VP+   +S+LI
Sbjct: 535 NRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 580



 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 55/171 (32%), Positives = 90/171 (52%)
 Frame = -2

Query: 525 RGKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHT 346
           +G I+EA RL   M ++G ++D +    + +G CRS   + A  L   + ERG++ NV +
Sbjct: 376 KGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVS 435

Query: 345 YGALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMV 166
           +  L++  CK      A  L   M+  G   + V +N  I+ YC KG ++EA KL + M 
Sbjct: 436 FSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQ 495

Query: 165 NKGIKADVYTYTTMASGLCKLKRADEAKELLITMVDKGVVPNMVSFSTLIN 13
            +G+  D YTYT++  G       D A EL   M   G+  N+V+++ +I+
Sbjct: 496 ERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIIS 546



 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/100 (46%), Positives = 67/100 (67%)
 Frame = -2

Query: 525 RGKIEEAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHT 346
           +GK+EEA +L  EM ERG+  D Y YTS+I+G   SGN+ RA  LF+E+P+ GL+ NV T
Sbjct: 481 KGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVT 540

Query: 345 YGALLNGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLI 226
           Y  +++GL K G+ + A  L +EM   GI  +  I+++LI
Sbjct: 541 YTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 580



 Score = 87.8 bits (216), Expect = 9e-16
 Identities = 47/136 (34%), Positives = 75/136 (55%)
 Frame = -2

Query: 510 EAERLFEEMGERGIQMDIYVYTSMINGNCRSGNLKRAFALFDELPERGLSVNVHTYGALL 331
           EA RLF+ M ++G    +  Y + I   C+ G ++ A+ L +E+ ERGL  + +TY +L+
Sbjct: 451 EARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLI 510

Query: 330 NGLCKVGQMEAATILLNEMQINGIDLNQVIFNTLIDGYCNKGMIDEAIKLQDVMVNKGIK 151
           +G    G ++ A  L NEM   G++ N V +  +I G    G  DEA KL D M  +GI 
Sbjct: 511 DGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIV 570

Query: 150 ADVYTYTTMASGLCKL 103
            D   Y+++ + L K+
Sbjct: 571 PDDGIYSSLIASLHKV 586