BLASTX nr result

ID: Coptis24_contig00020253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020253
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632458.1| PREDICTED: uncharacterized protein LOC100248...   276   2e-72
emb|CBI40978.3| unnamed protein product [Vitis vinifera]              276   2e-72
ref|XP_002310767.1| predicted protein [Populus trichocarpa] gi|2...   275   4e-72
ref|XP_002522372.1| GTP-binding  protein alpha subunit, gna, put...   273   2e-71
ref|XP_002306447.1| predicted protein [Populus trichocarpa] gi|2...   273   2e-71

>ref|XP_003632458.1| PREDICTED: uncharacterized protein LOC100248291 [Vitis vinifera]
          Length = 918

 Score =  276 bits (706), Expect = 2e-72
 Identities = 136/199 (68%), Positives = 163/199 (81%)
 Frame = +2

Query: 2   GLWGKEGQKPCKFISPHLNVGGDIMNNASNGNANVKINNREITKVELRLLQLAGVQCAGN 181
           GLWGKEGQKP K ISP+L+VGG I  NASNGN  V IN REITKVELR+LQLAGVQCAGN
Sbjct: 379 GLWGKEGQKPSKIISPNLSVGGPIRANASNGNTQVFINGREITKVELRMLQLAGVQCAGN 438

Query: 182 PHFWLDECGFYQEEGQKLPKGNLWNKTGIKVLCAALSLPIPSSKIVNPSAEEVNILLSGA 361
           PHFW++E G YQEEGQK  KG +W K G K++CA LSLP+P SK ++PS E+VN  ++  
Sbjct: 439 PHFWVNEDGSYQEEGQKNTKGYIWGKAGTKLVCAVLSLPVP-SKFLSPSGEQVNNFVTRT 497

Query: 362 IPEYLKERALQKLLLVGYDGSGTSTIFKQAKMLYKAEPFSEHELQDIKFIIQRNVYTYLC 541
           +P+YL++R LQKLLL+G +GSGTSTIFKQAK+LYKA PFSE E ++IK  IQ NVY YL 
Sbjct: 498 VPDYLEQRTLQKLLLIGNNGSGTSTIFKQAKILYKATPFSEDERENIKLKIQSNVYGYLG 557

Query: 542 ILLEGRERFEEESLAQMKR 598
           ILLEGRERFE+ESL +M++
Sbjct: 558 ILLEGRERFEDESLIEMRK 576


>emb|CBI40978.3| unnamed protein product [Vitis vinifera]
          Length = 755

 Score =  276 bits (706), Expect = 2e-72
 Identities = 136/199 (68%), Positives = 163/199 (81%)
 Frame = +2

Query: 2   GLWGKEGQKPCKFISPHLNVGGDIMNNASNGNANVKINNREITKVELRLLQLAGVQCAGN 181
           GLWGKEGQKP K ISP+L+VGG I  NASNGN  V IN REITKVELR+LQLAGVQCAGN
Sbjct: 216 GLWGKEGQKPSKIISPNLSVGGPIRANASNGNTQVFINGREITKVELRMLQLAGVQCAGN 275

Query: 182 PHFWLDECGFYQEEGQKLPKGNLWNKTGIKVLCAALSLPIPSSKIVNPSAEEVNILLSGA 361
           PHFW++E G YQEEGQK  KG +W K G K++CA LSLP+P SK ++PS E+VN  ++  
Sbjct: 276 PHFWVNEDGSYQEEGQKNTKGYIWGKAGTKLVCAVLSLPVP-SKFLSPSGEQVNNFVTRT 334

Query: 362 IPEYLKERALQKLLLVGYDGSGTSTIFKQAKMLYKAEPFSEHELQDIKFIIQRNVYTYLC 541
           +P+YL++R LQKLLL+G +GSGTSTIFKQAK+LYKA PFSE E ++IK  IQ NVY YL 
Sbjct: 335 VPDYLEQRTLQKLLLIGNNGSGTSTIFKQAKILYKATPFSEDERENIKLKIQSNVYGYLG 394

Query: 542 ILLEGRERFEEESLAQMKR 598
           ILLEGRERFE+ESL +M++
Sbjct: 395 ILLEGRERFEDESLIEMRK 413


>ref|XP_002310767.1| predicted protein [Populus trichocarpa] gi|222853670|gb|EEE91217.1|
           predicted protein [Populus trichocarpa]
          Length = 901

 Score =  275 bits (704), Expect = 4e-72
 Identities = 138/199 (69%), Positives = 161/199 (80%)
 Frame = +2

Query: 2   GLWGKEGQKPCKFISPHLNVGGDIMNNASNGNANVKINNREITKVELRLLQLAGVQCAGN 181
           GLWGKEGQKP + ISPHLNVGG I  NAS+GN  V IN REITKVELR+LQLAGVQCAGN
Sbjct: 371 GLWGKEGQKPSQVISPHLNVGGPIKANASSGNTQVFINGREITKVELRMLQLAGVQCAGN 430

Query: 182 PHFWLDECGFYQEEGQKLPKGNLWNKTGIKVLCAALSLPIPSSKIVNPSAEEVNILLSGA 361
           PHFW++E G YQEEGQK  KG +W K G+K++CA LSLP+P SK  N   E+VN L+S +
Sbjct: 431 PHFWVNEDGSYQEEGQKNTKGYIWGKAGMKLVCAFLSLPVP-SKPSNSCGEQVNSLISRS 489

Query: 362 IPEYLKERALQKLLLVGYDGSGTSTIFKQAKMLYKAEPFSEHELQDIKFIIQRNVYTYLC 541
           +P+YL++R L KLLLVGY GSGTSTIFKQAK+LYK  PF+E E ++IK  IQ NVY YL 
Sbjct: 490 VPDYLEQRTLLKLLLVGYSGSGTSTIFKQAKILYKPVPFTEDERENIKLTIQSNVYGYLG 549

Query: 542 ILLEGRERFEEESLAQMKR 598
           ILLEGR+RFEEESLA MK+
Sbjct: 550 ILLEGRDRFEEESLAAMKK 568


>ref|XP_002522372.1| GTP-binding  protein alpha subunit, gna, putative [Ricinus
           communis] gi|223538450|gb|EEF40056.1| GTP-binding
           protein alpha subunit, gna, putative [Ricinus communis]
          Length = 917

 Score =  273 bits (698), Expect = 2e-71
 Identities = 136/204 (66%), Positives = 162/204 (79%)
 Frame = +2

Query: 2   GLWGKEGQKPCKFISPHLNVGGDIMNNASNGNANVKINNREITKVELRLLQLAGVQCAGN 181
           GLWGKEGQKP + ISPHLNVGG I  +ASNGN  V IN REITKVELR+LQLAGVQCAGN
Sbjct: 378 GLWGKEGQKPSQIISPHLNVGGPINADASNGNTQVYINGREITKVELRMLQLAGVQCAGN 437

Query: 182 PHFWLDECGFYQEEGQKLPKGNLWNKTGIKVLCAALSLPIPSSKIVNPSAEEVNILLSGA 361
           PHFW++E G YQEEGQK  KG +W K G+K++C  LSLP+P SK  N   E+VN  +S +
Sbjct: 438 PHFWVNEDGSYQEEGQKNTKGYIWGKAGMKLVCTFLSLPVP-SKSSNSLGEQVNSGVSRS 496

Query: 362 IPEYLKERALQKLLLVGYDGSGTSTIFKQAKMLYKAEPFSEHELQDIKFIIQRNVYTYLC 541
           +P+YL++R L K+LLVGY+GSGTSTIFKQAK+LYK  PF+E E ++IK  IQ NVY YL 
Sbjct: 497 VPDYLEQRTLLKILLVGYNGSGTSTIFKQAKILYKPVPFTEDERENIKLTIQSNVYGYLG 556

Query: 542 ILLEGRERFEEESLAQMKRTHQPD 613
           ILLEGR+RFEEESLA +K+ H  D
Sbjct: 557 ILLEGRDRFEEESLAVIKKEHSSD 580


>ref|XP_002306447.1| predicted protein [Populus trichocarpa] gi|222855896|gb|EEE93443.1|
           predicted protein [Populus trichocarpa]
          Length = 886

 Score =  273 bits (697), Expect = 2e-71
 Identities = 136/204 (66%), Positives = 160/204 (78%)
 Frame = +2

Query: 2   GLWGKEGQKPCKFISPHLNVGGDIMNNASNGNANVKINNREITKVELRLLQLAGVQCAGN 181
           GLWGK GQKPC+ ISPHLNVGG I  NASNGN  V +N REITKVELR+LQLAGVQCAGN
Sbjct: 345 GLWGKVGQKPCQIISPHLNVGGPIKANASNGNTQVFMNGREITKVELRMLQLAGVQCAGN 404

Query: 182 PHFWLDECGFYQEEGQKLPKGNLWNKTGIKVLCAALSLPIPSSKIVNPSAEEVNILLSGA 361
           PHFW++E G YQEEGQK  KG +W K G+K++CA LSLP+P SK  N   E+VN L+S +
Sbjct: 405 PHFWVNEDGSYQEEGQKNTKGYIWGKAGMKLVCAFLSLPVP-SKPSNSCGEQVNSLISRS 463

Query: 362 IPEYLKERALQKLLLVGYDGSGTSTIFKQAKMLYKAEPFSEHELQDIKFIIQRNVYTYLC 541
           IP+YL++R L KLLLVG+ GSGTSTIFKQAK+LYK  PF+E E ++IK  IQ NVY YL 
Sbjct: 464 IPDYLEQRTLLKLLLVGFSGSGTSTIFKQAKILYKPVPFTEDERENIKLTIQSNVYGYLG 523

Query: 542 ILLEGRERFEEESLAQMKRTHQPD 613
           ILLEGR+RFEEESL  + +    D
Sbjct: 524 ILLEGRDRFEEESLTAVTKEQSTD 547


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