BLASTX nr result

ID: Coptis24_contig00020252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020252
         (828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299484.1| predicted protein [Populus trichocarpa] gi|2...   127   3e-27
ref|XP_002509936.1| conserved hypothetical protein [Ricinus comm...   120   5e-25
gb|AAG43553.1|AF211535_1 Avr9/Cf-9 rapidly elicited protein 194 ...   119   6e-25
ref|XP_003538678.1| PREDICTED: uncharacterized protein LOC100777...   109   9e-22
ref|XP_002887896.1| predicted protein [Arabidopsis lyrata subsp....    96   1e-17

>ref|XP_002299484.1| predicted protein [Populus trichocarpa] gi|222846742|gb|EEE84289.1|
           predicted protein [Populus trichocarpa]
          Length = 142

 Score =  127 bits (319), Expect = 3e-27
 Identities = 75/150 (50%), Positives = 96/150 (64%), Gaps = 1/150 (0%)
 Frame = +1

Query: 241 QQHVKALVWDCDSSLYDSFELKSFERQLDSAI-SRTQSMPHVSASRHAXXXXXXXXXXXX 417
           Q + KALVWDC SSLYDSFELKSFERQLDSAI SRT SMPH    +              
Sbjct: 2   QANNKALVWDCGSSLYDSFELKSFERQLDSAINSRTLSMPHFPDRQ-------VLTTPPP 54

Query: 418 XXXXXXXXXRSIHKLFRSIIRPKPNSSMIYQVEEWSKEGVYFVYDRSGALSTIPEASEHG 597
                    RS++K  +S+ + K NSS +++V+E  ++  Y +YD+SGAL+TIPE  E  
Sbjct: 55  PPKKPSKISRSLNKFLKSMFKSKQNSSTMFRVQERLQDEYYVIYDKSGALTTIPEVPE-- 112

Query: 598 MECMGHSTEFDSIVRKTASERFTATSIGIS 687
           ++  G S E +S+VRKT S+RFTA SIGIS
Sbjct: 113 IDFGGFSPEINSLVRKTVSDRFTAASIGIS 142


>ref|XP_002509936.1| conserved hypothetical protein [Ricinus communis]
           gi|223549835|gb|EEF51323.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 182

 Score =  120 bits (300), Expect = 5e-25
 Identities = 76/164 (46%), Positives = 101/164 (61%), Gaps = 5/164 (3%)
 Frame = +1

Query: 217 PQEQNKKDQQHV-KALVWDCDSSLYDSFELKSFERQLDSAI-SRTQSMPHVSASR--HAX 384
           P    K++QQH  KA VWDC S+LYDSFELKSFERQL SAI SRT SMPH+   +   A 
Sbjct: 21  PNLNLKQEQQHRRKAFVWDCGSTLYDSFELKSFERQLCSAIHSRTLSMPHLPDRKVAAAA 80

Query: 385 XXXXXXXXXXXXXXXXXXXXRSIHKLFRSIIRPKPNSSMIYQVEEWSKEGVYFVYDRSGA 564
                               RS++KL +S+ + + NS+ +++  +   +    VYD+SGA
Sbjct: 81  DTMIPPPSLPPVTKKPSKISRSLNKLLKSVFKSRQNSTGLFRFRDRPGDEYCAVYDKSGA 140

Query: 565 LSTIPEASEHGMECMGHSTEFDSIVRKTASERFTATSI-GISCA 693
           LSTIPE  E  ++  G S E +S+VR++ SERFTATS+ GISCA
Sbjct: 141 LSTIPEVPE--IDFGGFSPEINSLVRRSGSERFTATSVMGISCA 182


>gb|AAG43553.1|AF211535_1 Avr9/Cf-9 rapidly elicited protein 194 [Nicotiana tabacum]
          Length = 155

 Score =  119 bits (299), Expect = 6e-25
 Identities = 74/154 (48%), Positives = 89/154 (57%), Gaps = 7/154 (4%)
 Frame = +1

Query: 253 KALVWDCDSSLYDSFELKSFERQLDSAI-SRTQSMPHVSASR-----HAXXXXXXXXXXX 414
           K  +WDC SSLYDSFELKSFERQLDSAI SR+ SMPH+   R                  
Sbjct: 6   KTPIWDCGSSLYDSFELKSFERQLDSAIASRSLSMPHLPDRRILIPSSNSQQQQEQQQTQ 65

Query: 415 XXXXXXXXXXRSIHKLFRSIIRPKPNSSMIYQVEEWS-KEGVYFVYDRSGALSTIPEASE 591
                     RS  KL +S+ R K N+S ++   + S  +G Y +YD+SGAL+TIPE   
Sbjct: 66  PISKKSSKISRSFQKLLKSLFRQKQNNSPLFSGHKQSIGDGFYVIYDKSGALTTIPE--- 122

Query: 592 HGMECMGHSTEFDSIVRKTASERFTATSIGISCA 693
            G EC   S E  S+VR+T SERFT  SIGISCA
Sbjct: 123 -GPECDNLSPEIKSLVRRTGSERFTVASIGISCA 155


>ref|XP_003538678.1| PREDICTED: uncharacterized protein LOC100777768 [Glycine max]
          Length = 228

 Score =  109 bits (272), Expect = 9e-22
 Identities = 79/175 (45%), Positives = 94/175 (53%), Gaps = 13/175 (7%)
 Frame = +1

Query: 208 MEKPQEQNKKDQQHVKALVWDCDSSLYDSFELKSFERQLDSA-----ISRTQSMPHV-SA 369
           MEK     K         VWDC S+LYDSFEL SF+RQLDSA     ISRT SMPH+   
Sbjct: 60  MEKLDLATKSSSYPPSNNVWDCGSTLYDSFELNSFKRQLDSAIANSPISRTLSMPHLPER 119

Query: 370 SRHAXXXXXXXXXXXXXXXXXXXXXRSIHKLFRSIIRPKPNS-----SMIYQV-EEWSKE 531
           S HA                     RS  KL RS+ +    S     S+ +QV E++S+E
Sbjct: 120 SLHA----LSEQPATVMSRKSFKISRSFQKLLRSVFKSNNKSTTTSTSLSFQVPEKYSRE 175

Query: 532 GVYFVYDRSG-ALSTIPEASEHGMECMGHSTEFDSIVRKTASERFTATSIGISCA 693
             Y VYD+SG  LSTIPE  E   E    S E  S VR++ASERFT T+IG+SCA
Sbjct: 176 RFYVVYDKSGPVLSTIPEVPE--FEIGALSPEISSFVRRSASERFTPTAIGVSCA 228


>ref|XP_002887896.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333737|gb|EFH64155.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 261

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 64/152 (42%), Positives = 89/152 (58%), Gaps = 5/152 (3%)
 Frame = +1

Query: 253 KALVWDCDSSLYDSFELKSFERQLDSAIS---RTQSMPHVSASRHAXXXXXXXXXXXXXX 423
           K  VWDC+S+LYDSFEL SF RQLDSAIS   R+ SMPH+S +                 
Sbjct: 114 KKKVWDCESTLYDSFELNSFNRQLDSAISSSARSMSMPHLSPT-PPPPSETTSSLTKKQQ 172

Query: 424 XXXXXXXRSIHKLFRSIIRPK-PNSSMIYQVEEWSKEGVYFVYDRSGALSTIPEASEHGM 600
                  RS+ KL +S++R K  N+S     +E   +  Y V+D++G+L+TIPE+ E   
Sbjct: 173 SPTKKISRSLGKLIKSMLRQKQSNASFKAGHDEVDMDKYYVVFDKTGSLTTIPESGE-ST 231

Query: 601 ECMGHSTEFDSIVRKTASERFTATS-IGISCA 693
           E +G  +E +S+VRKT SER   +  +GISC+
Sbjct: 232 EMVG--SEINSLVRKTTSERIPLSRLVGISCS 261


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