BLASTX nr result

ID: Coptis24_contig00020172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020172
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280228.2| PREDICTED: beta-galactosidase 17-like [Vitis...   211   6e-53
ref|XP_003543592.1| PREDICTED: beta-galactosidase 17-like [Glyci...   202   4e-50
gb|ACU17905.1| unknown [Glycine max]                                  200   1e-49
ref|XP_004146820.1| PREDICTED: beta-galactosidase 17-like [Cucum...   198   6e-49
ref|XP_002327549.1| predicted protein [Populus trichocarpa] gi|2...   194   6e-48

>ref|XP_002280228.2| PREDICTED: beta-galactosidase 17-like [Vitis vinifera]
           gi|297743091|emb|CBI35958.3| unnamed protein product
           [Vitis vinifera]
          Length = 708

 Score =  211 bits (537), Expect = 6e-53
 Identities = 99/136 (72%), Positives = 111/136 (81%), Gaps = 6/136 (4%)
 Frame = -3

Query: 392 FPSLPPVPEYSSLL----RNSVIRI--PTFEIENDKFWKDGQPLQIIGGDLHYFRIVPEY 231
           F    P+P  SSL      +S IR+    FEI+NDKFWKDGQP QIIGGDLHYFR+ PEY
Sbjct: 46  FTFFAPLPSLSSLSPPLPASSPIRVIGQKFEIKNDKFWKDGQPFQIIGGDLHYFRVHPEY 105

Query: 230 WEDRLLRAKALGLNTIQTYVPWNLHEPKPGEWMFEGIADLESFLKMCHKLGFLVMLRPGP 51
           WEDRLLRAKALGLNTIQTYVPWNLHEP+PG+ +FEGIAD+ +FLK+C KL FLVMLRPGP
Sbjct: 106 WEDRLLRAKALGLNTIQTYVPWNLHEPRPGKLVFEGIADIVAFLKLCQKLDFLVMLRPGP 165

Query: 50  YICAEWDFGGFPAWML 3
           YIC EWD GGFPAW+L
Sbjct: 166 YICGEWDLGGFPAWLL 181


>ref|XP_003543592.1| PREDICTED: beta-galactosidase 17-like [Glycine max]
          Length = 708

 Score =  202 bits (513), Expect = 4e-50
 Identities = 90/131 (68%), Positives = 107/131 (81%), Gaps = 2/131 (1%)
 Frame = -3

Query: 395 YFPSLPPVPEYSS--LLRNSVIRIPTFEIENDKFWKDGQPLQIIGGDLHYFRIVPEYWED 222
           + P   P+P +SS    RN+V R   FEI ND+FWKDG+P QIIGGD+HYFR+ PEYWED
Sbjct: 44  FLPVFAPLPSFSSHHSHRNTVNR--KFEIANDRFWKDGEPFQIIGGDVHYFRVHPEYWED 101

Query: 221 RLLRAKALGLNTIQTYVPWNLHEPKPGEWMFEGIADLESFLKMCHKLGFLVMLRPGPYIC 42
           RLL+AKALGLNTIQTYVPWNLHEP PG+ +FEG A++E+FL +CHK G LVM+RPGPYIC
Sbjct: 102 RLLKAKALGLNTIQTYVPWNLHEPAPGKLVFEGFANIEAFLNLCHKHGLLVMIRPGPYIC 161

Query: 41  AEWDFGGFPAW 9
            EWD+GGFP W
Sbjct: 162 GEWDWGGFPGW 172


>gb|ACU17905.1| unknown [Glycine max]
          Length = 400

 Score =  200 bits (508), Expect = 1e-49
 Identities = 89/131 (67%), Positives = 107/131 (81%), Gaps = 2/131 (1%)
 Frame = -3

Query: 395 YFPSLPPVPEYSS--LLRNSVIRIPTFEIENDKFWKDGQPLQIIGGDLHYFRIVPEYWED 222
           + P   P+P +SS    RN+V R   FEI ND+FWKDG+P QIIGGD+HYFR+ PEYWED
Sbjct: 43  FLPVFAPLPSFSSHHSHRNTVNR--KFEIANDRFWKDGEPFQIIGGDVHYFRVHPEYWED 100

Query: 221 RLLRAKALGLNTIQTYVPWNLHEPKPGEWMFEGIADLESFLKMCHKLGFLVMLRPGPYIC 42
           RLL+AKALGLNTIQTYVPW+LHEP PG+ +FEG A++E+FL +CHK G LVM+RPGPYIC
Sbjct: 101 RLLKAKALGLNTIQTYVPWSLHEPAPGKLVFEGFANIEAFLNLCHKHGLLVMIRPGPYIC 160

Query: 41  AEWDFGGFPAW 9
            EWD+GGFP W
Sbjct: 161 GEWDWGGFPGW 171


>ref|XP_004146820.1| PREDICTED: beta-galactosidase 17-like [Cucumis sativus]
          Length = 719

 Score =  198 bits (503), Expect = 6e-49
 Identities = 84/107 (78%), Positives = 97/107 (90%)
 Frame = -3

Query: 323 FEIENDKFWKDGQPLQIIGGDLHYFRIVPEYWEDRLLRAKALGLNTIQTYVPWNLHEPKP 144
           FEI++D FWKDG+P QIIGGDLHYFR +PEYWEDRLLRAKALGLNTIQTY+PWNLHEPKP
Sbjct: 69  FEIDDDMFWKDGKPFQIIGGDLHYFRTLPEYWEDRLLRAKALGLNTIQTYIPWNLHEPKP 128

Query: 143 GEWMFEGIADLESFLKMCHKLGFLVMLRPGPYICAEWDFGGFPAWML 3
           G + F GIA++ SF+++C KL FLV+LRPGPYICAEWD GGFPAW+L
Sbjct: 129 GNFTFNGIANIVSFIQLCQKLDFLVLLRPGPYICAEWDLGGFPAWLL 175


>ref|XP_002327549.1| predicted protein [Populus trichocarpa] gi|222836103|gb|EEE74524.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  194 bits (494), Expect = 6e-48
 Identities = 87/114 (76%), Positives = 100/114 (87%), Gaps = 6/114 (5%)
 Frame = -3

Query: 326 TFEIENDKFWKDGQPLQIIGGDLHYFRIVPE------YWEDRLLRAKALGLNTIQTYVPW 165
           +FEI++DKFWKDG+  +IIGGDLHYFRI+P+      YWEDRL+RAKALGLNTIQTYVPW
Sbjct: 2   SFEIDDDKFWKDGEFFRIIGGDLHYFRILPQASLYLFYWEDRLVRAKALGLNTIQTYVPW 61

Query: 164 NLHEPKPGEWMFEGIADLESFLKMCHKLGFLVMLRPGPYICAEWDFGGFPAWML 3
           NLHEP+PG+ +FEGIADL SFLK+CHKL  LVMLRPGPYIC EWD GGFPAW+L
Sbjct: 62  NLHEPQPGKLVFEGIADLVSFLKLCHKLDILVMLRPGPYICGEWDLGGFPAWLL 115


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