BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020089
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35966.3| unnamed protein product [Vitis vinifera]              147   9e-34
ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containi...   144   6e-33
emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]   143   1e-32
ref|XP_003572348.1| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32
gb|EAZ07511.1| hypothetical protein OsI_29767 [Oryza sativa Indi...   140   1e-31

>emb|CBI35966.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  147 bits (371), Expect = 9e-34
 Identities = 76/155 (49%), Positives = 103/155 (66%), Gaps = 4/155 (2%)
 Frame = +3

Query: 9   PEQGLITYVKMLRSLTRPDNYTYPFVLK---TVGSIWEGMQVHGHVFRNGFGDNVFVVNT 179
           P+  L  Y+KMLRS T+P N+T+PFVLK   T+GS+ EG Q+H HV R GFG ++FV N+
Sbjct: 74  PQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNS 133

Query: 180 LISMYCGFKEMGLGQKVFDECGTLDIVSWNSLIDGYVKLGVLDMARRLFDKMP-ERNEVS 356
           LI MYC    +   +  +D+ G  D VSWNS+I GYV+ G ++ AR LF++MP  RN V 
Sbjct: 134 LIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVC 193

Query: 357 WTAIISGYAKKGDLDVAKSLFERMPVCRNTVTWNS 461
           WTA+I+GY K+GD     SLF +M V  + V  N+
Sbjct: 194 WTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNA 228


>ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
           gi|297739328|emb|CBI28979.3| unnamed protein product
           [Vitis vinifera]
          Length = 585

 Score =  144 bits (364), Expect = 6e-33
 Identities = 78/159 (49%), Positives = 103/159 (64%), Gaps = 4/159 (2%)
 Frame = +3

Query: 3   SFPEQGLITYVKMLRSLTRPDNYTYPFVLKTVGS---IWEGMQVHGHVFRNGFGDNVFVV 173
           S PE+ L  Y +M R     DNYTYPFVLK  G+   + EG  V G   + GFG +VFVV
Sbjct: 89  STPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVV 148

Query: 174 NTLISMYCGFKEMGLGQKVFDECGTLDIVSWNSLIDGYVKLGVLDMARRLFDKMPERNEV 353
           N LISMYC   E G  + VFD     D+VSWNS++ GYV  G ++ A+ +FD+MPER+ V
Sbjct: 149 NGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVV 208

Query: 354 SWTAIISGYAKK-GDLDVAKSLFERMPVCRNTVTWNSMI 467
           SW+ +I GY KK G+++ A+  F+ MP  R+ V+WNSMI
Sbjct: 209 SWSIMIDGYGKKMGEVNRARVFFDSMPT-RDLVSWNSMI 246


>emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
          Length = 585

 Score =  143 bits (361), Expect = 1e-32
 Identities = 77/159 (48%), Positives = 103/159 (64%), Gaps = 4/159 (2%)
 Frame = +3

Query: 3   SFPEQGLITYVKMLRSLTRPDNYTYPFVLKTVGS---IWEGMQVHGHVFRNGFGDNVFVV 173
           S PE+ L  Y +M +     DNYTYPFVLK  G+   + EG  V G   + GFG +VFVV
Sbjct: 89  STPERALRFYAEMRKKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVV 148

Query: 174 NTLISMYCGFKEMGLGQKVFDECGTLDIVSWNSLIDGYVKLGVLDMARRLFDKMPERNEV 353
           N LISMYC   E G  + VFD     D+VSWNS++ GYV  G ++ A+ +FD+MPER+ V
Sbjct: 149 NGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVV 208

Query: 354 SWTAIISGYAKK-GDLDVAKSLFERMPVCRNTVTWNSMI 467
           SW+ +I GY KK G+++ A+  F+ MP  R+ V+WNSMI
Sbjct: 209 SWSIMIDGYGKKMGEVNRARVFFDSMPT-RDLVSWNSMI 246


>ref|XP_003572348.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Brachypodium distachyon]
          Length = 555

 Score =  142 bits (358), Expect = 3e-32
 Identities = 70/160 (43%), Positives = 104/160 (65%), Gaps = 6/160 (3%)
 Frame = +3

Query: 9   PEQGLITYVKMLRSLTRPDNYTYPFVLKTVGSIWE----GMQVHGHVFRNGFGDNVFVVN 176
           P      +  +LRS   PD +T+P +LK+   +      G QVH    R G   +VFVVN
Sbjct: 59  PRLAFAAFSSILRSGDTPDRFTFPSLLKSASRLASFPRTGAQVHAQAVRRGLLVDVFVVN 118

Query: 177 TLISMYCGFKEMGLGQKVFDEC-GTLDIVSWNSLIDGYVKLGVLDMARRLFDKMPERNEV 353
           TL++MY  F++    ++VFD C G  D+V+WN+++ GYVK G +  ARR+F++MP+RN V
Sbjct: 119 TLLAMYAAFRDTRSMREVFDSCAGVADLVTWNTMLGGYVKCGEIGEARRVFEQMPQRNGV 178

Query: 354 SWTAIISGYAKKGDLDVAKSLFERMP-VCRNTVTWNSMIS 470
           SW+A++  YA  G+LDVA+ +F+ MP + RN V+WNSMI+
Sbjct: 179 SWSAMVGAYAGAGELDVAREMFDEMPAIGRNVVSWNSMIT 218



 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 41/101 (40%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
 Frame = +3

Query: 174 NTLISMYCGFKEMGLGQKVFDECGTL--DIVSWNSLIDGYVKLGVLDMARRLFDKMPERN 347
           + ++  Y G  E+ + +++FDE   +  ++VSWNS+I G+ + G+L +AR++FD+MP RN
Sbjct: 181 SAMVGAYAGAGELDVAREMFDEMPAIGRNVVSWNSMITGFARHGLLPLARKMFDEMPVRN 240

Query: 348 EVSWTAIISGYAKKGDLDVAKSLFERMPVCRNTVTWNSMIS 470
            VSW  ++ GYA  G+++ A+ LF+RMP  ++ V+W  MIS
Sbjct: 241 LVSWNTMVRGYAVNGEMNDARELFDRMPE-KDVVSWTCMIS 280



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 43/110 (39%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
 Frame = +3

Query: 153 GDNVFVVNTLISMYCGFKEMGLGQKVFDECGTLDIVSWNSLIDGYVKLGVLDMARRLFDK 332
           G NV   N++I+ +     + L +K+FDE    ++VSWN+++ GY   G ++ AR LFD+
Sbjct: 207 GRNVVSWNSMITGFARHGLLPLARKMFDEMPVRNLVSWNTMVRGYAVNGEMNDARELFDR 266

Query: 333 MPERNEVSWTAIISGYAKKGDLDVAKSLFERMP----VCRNTVTWNSMIS 470
           MPE++ VSWT +ISGYA+         LF  M     V  N VT  S++S
Sbjct: 267 MPEKDVVSWTCMISGYAQARCYTETLELFRAMQSESNVLPNEVTMVSVLS 316


>gb|EAZ07511.1| hypothetical protein OsI_29767 [Oryza sativa Indica Group]
          Length = 567

 Score =  140 bits (352), Expect = 1e-31
 Identities = 70/160 (43%), Positives = 101/160 (63%), Gaps = 6/160 (3%)
 Frame = +3

Query: 9   PEQGLITYVKMLRSLTRPDNYTYPFVLKTVGSI----WEGMQVHGHVFRNGFGDNVFVVN 176
           P      +  +LR    PD +T P +L + G +      G QVH    R GF  +VFVVN
Sbjct: 75  PRLSFAAFSSLLRCGLVPDRFTLPPLLGSAGKLPAFPRTGAQVHAQAVRRGFLADVFVVN 134

Query: 177 TLISMYCGFKEMGLGQKVFDEC-GTLDIVSWNSLIDGYVKLGVLDMARRLFDKMPERNEV 353
            L++MY   ++    ++VF  C G  D+VSWN++I GYVK G ++ A+R+FD+MP RN V
Sbjct: 135 ALLAMYGALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGV 194

Query: 354 SWTAIISGYAKKGDLDVAKSLFERMP-VCRNTVTWNSMIS 470
           SW+ ++ GYA  G+LDVA+ +F+RMP + RN VTWNSM++
Sbjct: 195 SWSTMVGGYAAAGELDVAREMFDRMPAIGRNVVTWNSMVT 234



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 43/110 (39%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
 Frame = +3

Query: 153 GDNVFVVNTLISMYCGFKEMGLGQKVFDECGTLDIVSWNSLIDGYVKLGVLDMARRLFDK 332
           G NV   N++++ +     + L +K+FDE    ++VSWN+++ GY     +D AR LFD 
Sbjct: 223 GRNVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDV 282

Query: 333 MPERNEVSWTAIISGYAKKGDLDVAKSLFERMP----VCRNTVTWNSMIS 470
           MPE++ VSWT +ISGYA+ G       LF  M     V  N VT  S++S
Sbjct: 283 MPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLS 332