BLASTX nr result

ID: Coptis24_contig00020082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020082
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267888.1| PREDICTED: uncharacterized protein LOC100248...   237   8e-61
emb|CBI22307.3| unnamed protein product [Vitis vinifera]              236   2e-60
ref|XP_002312265.1| predicted protein [Populus trichocarpa] gi|2...   233   1e-59
ref|XP_002522492.1| conserved hypothetical protein [Ricinus comm...   231   5e-59
ref|XP_003528573.1| PREDICTED: uncharacterized protein LOC100806...   231   6e-59

>ref|XP_002267888.1| PREDICTED: uncharacterized protein LOC100248804 [Vitis vinifera]
          Length = 347

 Score =  237 bits (605), Expect = 8e-61
 Identities = 120/182 (65%), Positives = 139/182 (76%)
 Frame = +2

Query: 2   LKIWRRLVSTYVWVSMIXXXXXXXXXXXXXXXXXXXXXXHFSSELEIYPAMVIAFVFSII 181
           +KIWRRLVSTY+WV M+                       F  +L +Y A+++  +FS++
Sbjct: 161 VKIWRRLVSTYLWVCMLIVSCLTVFLVTLIAVCNVFLIIGFPGDLIVYAAIMVGLIFSVV 220

Query: 182 FANVIIICNLAIVISVLEDVCGPQALLRSSVIIQGQTQVGLLIFLGSTIGMAFVEGLFEH 361
           FA  IIICN+AIVI VLE+V GPQALLRS V+I+GQTQVGLLIFLGSTIGMAFVEGLFEH
Sbjct: 221 FAKAIIICNIAIVICVLEEVSGPQALLRSGVLIKGQTQVGLLIFLGSTIGMAFVEGLFEH 280

Query: 362 RVKTLSYGDGSSRIWEGPLLVIMYSFVVLIDSMMSAVFYFACRSSSMEGLEQESQTILEA 541
           RVKTLSYGDGSSR+WEGPLLV+MYSFVVLIDSMMSAVFYF+CRSSS E L+ E   ILE 
Sbjct: 281 RVKTLSYGDGSSRVWEGPLLVVMYSFVVLIDSMMSAVFYFSCRSSSREALDGEIHPILET 340

Query: 542 TA 547
            A
Sbjct: 341 PA 342


>emb|CBI22307.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score =  236 bits (602), Expect = 2e-60
 Identities = 119/179 (66%), Positives = 138/179 (77%)
 Frame = +2

Query: 2   LKIWRRLVSTYVWVSMIXXXXXXXXXXXXXXXXXXXXXXHFSSELEIYPAMVIAFVFSII 181
           +KIWRRLVSTY+WV M+                       F  +L +Y A+++  +FS++
Sbjct: 104 VKIWRRLVSTYLWVCMLIVSCLTVFLVTLIAVCNVFLIIGFPGDLIVYAAIMVGLIFSVV 163

Query: 182 FANVIIICNLAIVISVLEDVCGPQALLRSSVIIQGQTQVGLLIFLGSTIGMAFVEGLFEH 361
           FA  IIICN+AIVI VLE+V GPQALLRS V+I+GQTQVGLLIFLGSTIGMAFVEGLFEH
Sbjct: 164 FAKAIIICNIAIVICVLEEVSGPQALLRSGVLIKGQTQVGLLIFLGSTIGMAFVEGLFEH 223

Query: 362 RVKTLSYGDGSSRIWEGPLLVIMYSFVVLIDSMMSAVFYFACRSSSMEGLEQESQTILE 538
           RVKTLSYGDGSSR+WEGPLLV+MYSFVVLIDSMMSAVFYF+CRSSS E L+ E   ILE
Sbjct: 224 RVKTLSYGDGSSRVWEGPLLVVMYSFVVLIDSMMSAVFYFSCRSSSREALDGEIHPILE 282


>ref|XP_002312265.1| predicted protein [Populus trichocarpa] gi|222852085|gb|EEE89632.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  233 bits (595), Expect = 1e-59
 Identities = 120/186 (64%), Positives = 137/186 (73%)
 Frame = +2

Query: 5   KIWRRLVSTYVWVSMIXXXXXXXXXXXXXXXXXXXXXXHFSSELEIYPAMVIAFVFSIIF 184
           KIWRR+VSTY+W  M+                       F  EL +Y AM++  VFS+IF
Sbjct: 171 KIWRRIVSTYLWSCMVIVGCLTLFFVLLLAVCSTFLVLGFWPELNLYAAMIVGLVFSVIF 230

Query: 185 ANVIIICNLAIVISVLEDVCGPQALLRSSVIIQGQTQVGLLIFLGSTIGMAFVEGLFEHR 364
           AN II+CN+A+VISVL DV GPQALLRSSV+I+GQTQVGLLIFLGSTIGMAF+EGLFEHR
Sbjct: 231 ANAIIVCNIAVVISVLVDVSGPQALLRSSVLIRGQTQVGLLIFLGSTIGMAFIEGLFEHR 290

Query: 365 VKTLSYGDGSSRIWEGPLLVIMYSFVVLIDSMMSAVFYFACRSSSMEGLEQESQTILEAT 544
           VKTLSYGDGSSRIWEGPLLVIMYSFVVLID MMSAVFY++CRS  ME  + E   IL   
Sbjct: 291 VKTLSYGDGSSRIWEGPLLVIMYSFVVLIDLMMSAVFYYSCRSHGMEASDGECLAILGTV 350

Query: 545 APSSGS 562
             S+ S
Sbjct: 351 TVSAES 356


>ref|XP_002522492.1| conserved hypothetical protein [Ricinus communis]
           gi|223538377|gb|EEF39984.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 363

 Score =  231 bits (590), Expect = 5e-59
 Identities = 118/186 (63%), Positives = 138/186 (74%)
 Frame = +2

Query: 5   KIWRRLVSTYVWVSMIXXXXXXXXXXXXXXXXXXXXXXHFSSELEIYPAMVIAFVFSIIF 184
           KIWRR+VSTY W  M+                       F   L +Y  +++  VFS++F
Sbjct: 174 KIWRRVVSTYWWACMMIVGCITLFCVLLLAICSLLSVIGFPPALNLYAGILVGLVFSVVF 233

Query: 185 ANVIIICNLAIVISVLEDVCGPQALLRSSVIIQGQTQVGLLIFLGSTIGMAFVEGLFEHR 364
           AN I+ICN+AIVISVLEDV GPQALLRSS++I+GQTQVGLLI+LGSTIG+AFVEGLFEHR
Sbjct: 234 ANAIVICNIAIVISVLEDVSGPQALLRSSILIRGQTQVGLLIYLGSTIGLAFVEGLFEHR 293

Query: 365 VKTLSYGDGSSRIWEGPLLVIMYSFVVLIDSMMSAVFYFACRSSSMEGLEQESQTILEAT 544
           VKTLSYGDGSSRIWEGPLLVIMYSFVVLID MMSA+FYF+CRS   E  + ESQ+ILE  
Sbjct: 294 VKTLSYGDGSSRIWEGPLLVIMYSFVVLIDLMMSAIFYFSCRSYRTEASDAESQSILETI 353

Query: 545 APSSGS 562
           + S  S
Sbjct: 354 SISDES 359


>ref|XP_003528573.1| PREDICTED: uncharacterized protein LOC100806351 [Glycine max]
          Length = 357

 Score =  231 bits (589), Expect = 6e-59
 Identities = 116/186 (62%), Positives = 142/186 (76%)
 Frame = +2

Query: 5   KIWRRLVSTYVWVSMIXXXXXXXXXXXXXXXXXXXXXXHFSSELEIYPAMVIAFVFSIIF 184
           K WR+++ TY+WV  +                       FS ++ +Y AM++  VFS++F
Sbjct: 168 KFWRKILFTYMWVCTVVVGCITLFCVFLVAFCSALAVLGFSPDVVVYCAMLVGLVFSVVF 227

Query: 185 ANVIIICNLAIVISVLEDVCGPQALLRSSVIIQGQTQVGLLIFLGSTIGMAFVEGLFEHR 364
           A  IIICN+A+VISVLEDV G QA+LRSS++I+GQTQVGLLIFLGSTIGMAFVEGLFEHR
Sbjct: 228 AKAIIICNIAMVISVLEDVSGAQAMLRSSILIKGQTQVGLLIFLGSTIGMAFVEGLFEHR 287

Query: 365 VKTLSYGDGSSRIWEGPLLVIMYSFVVLIDSMMSAVFYFACRSSSMEGLEQESQTILEAT 544
           VKTLSYGDGSSR+WEGPLLV+MYSFVVLIDSMMSAVFYF+CRSS+ME  + E ++ILE  
Sbjct: 288 VKTLSYGDGSSRVWEGPLLVVMYSFVVLIDSMMSAVFYFSCRSSNMEISDSEGKSILETM 347

Query: 545 APSSGS 562
           A S+ S
Sbjct: 348 AISAES 353


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