BLASTX nr result

ID: Coptis24_contig00020016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020016
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882664.1| hypothetical protein ARALYDRAFT_478367 [Arab...   186   2e-45
ref|XP_002862424.1| hypothetical protein ARALYDRAFT_497460 [Arab...   186   2e-45
ref|XP_002447542.1| hypothetical protein SORBIDRAFT_06g003053 [S...   186   2e-45
ref|NP_187648.1| glycerol-3-phosphate dehydrogenase SDP6 [Arabid...   186   2e-45
ref|XP_003590261.1| Glycerol-3-phosphate dehydrogenase SDP6 [Med...   185   3e-45

>ref|XP_002882664.1| hypothetical protein ARALYDRAFT_478367 [Arabidopsis lyrata subsp.
           lyrata] gi|297328504|gb|EFH58923.1| hypothetical protein
           ARALYDRAFT_478367 [Arabidopsis lyrata subsp. lyrata]
          Length = 619

 Score =  186 bits (472), Expect = 2e-45
 Identities = 86/130 (66%), Positives = 106/130 (81%)
 Frame = -2

Query: 391 TLVGTTDTSSIITDLPKPREEEIEFILSAIGDYLNIEVQRSDILSTWSGIRPLATDPSSK 212
           T+ GTTD+++ IT LP+P E+EI+FIL AI DYLNI+V+R+D+LS WSGIRPLA DP++K
Sbjct: 344 TVAGTTDSNTSITSLPEPHEDEIQFILDAISDYLNIKVRRTDVLSAWSGIRPLAMDPTAK 403

Query: 211 DTSSISRDHIVNVECPGLVTIAGGKWTTYRSMAEDVIDAAIKHGELNPLSSCATANLPLI 32
            T SISRDH+V  E PGLVTI GGKWTTYRSMAED +DAAIK G+L+P + C T  L L+
Sbjct: 404 STESISRDHVVFEENPGLVTITGGKWTTYRSMAEDAVDAAIKSGKLSPTNECVTQKLQLL 463

Query: 31  GAYGWEPLYF 2
           G+YGWEP  F
Sbjct: 464 GSYGWEPSSF 473


>ref|XP_002862424.1| hypothetical protein ARALYDRAFT_497460 [Arabidopsis lyrata subsp.
           lyrata] gi|297307929|gb|EFH38682.1| hypothetical protein
           ARALYDRAFT_497460 [Arabidopsis lyrata subsp. lyrata]
          Length = 617

 Score =  186 bits (472), Expect = 2e-45
 Identities = 86/130 (66%), Positives = 106/130 (81%)
 Frame = -2

Query: 391 TLVGTTDTSSIITDLPKPREEEIEFILSAIGDYLNIEVQRSDILSTWSGIRPLATDPSSK 212
           T+ GTTD+++ IT LP+P E+EI+FIL AI DYLNI+V+R+D+LS WSGIRPLA DP++K
Sbjct: 342 TVAGTTDSNTSITSLPEPHEDEIQFILDAISDYLNIKVRRTDVLSAWSGIRPLAMDPTAK 401

Query: 211 DTSSISRDHIVNVECPGLVTIAGGKWTTYRSMAEDVIDAAIKHGELNPLSSCATANLPLI 32
            T SISRDH+V  E PGLVTI GGKWTTYRSMAED +DAAIK G+L+P + C T  L L+
Sbjct: 402 STESISRDHVVFEENPGLVTITGGKWTTYRSMAEDAVDAAIKSGKLSPTNECVTQKLQLL 461

Query: 31  GAYGWEPLYF 2
           G+YGWEP  F
Sbjct: 462 GSYGWEPSSF 471


>ref|XP_002447542.1| hypothetical protein SORBIDRAFT_06g003053 [Sorghum bicolor]
           gi|241938725|gb|EES11870.1| hypothetical protein
           SORBIDRAFT_06g003053 [Sorghum bicolor]
          Length = 628

 Score =  186 bits (472), Expect = 2e-45
 Identities = 83/130 (63%), Positives = 106/130 (81%)
 Frame = -2

Query: 391 TLVGTTDTSSIITDLPKPREEEIEFILSAIGDYLNIEVQRSDILSTWSGIRPLATDPSSK 212
           T+ GTTD+S+ IT LP+P E+EI+FIL AI DYLN++V+RSD+LS WSGIRPLATDPS+K
Sbjct: 351 TVAGTTDSSTAITMLPEPHEDEIQFILDAISDYLNVQVRRSDVLSAWSGIRPLATDPSAK 410

Query: 211 DTSSISRDHIVNVECPGLVTIAGGKWTTYRSMAEDVIDAAIKHGELNPLSSCATANLPLI 32
           +T SISRDH+V  + PGL+TI GGKWTTYRSMAED ++AA++ G L P + C T NL ++
Sbjct: 411 NTESISRDHVVFEDYPGLITITGGKWTTYRSMAEDAVNAAVRSGNLKPANGCVTDNLHIV 470

Query: 31  GAYGWEPLYF 2
           G YGW+P  F
Sbjct: 471 GGYGWDPAAF 480


>ref|NP_187648.1| glycerol-3-phosphate dehydrogenase SDP6 [Arabidopsis thaliana]
           gi|75266244|sp|Q9SS48.1|SDP6_ARATH RecName:
           Full=Glycerol-3-phosphate dehydrogenase SDP6,
           mitochondrial; AltName: Full=Protein SUGAR-DEPENDENT 6;
           Flags: Precursor gi|6056190|gb|AAF02807.1|AC009400_3
           putative glycerol-3-phosphate dehydrogenase [Arabidopsis
           thaliana] gi|17380778|gb|AAL36219.1| putative
           glycerol-3-phosphate dehydrogenase [Arabidopsis
           thaliana] gi|20465281|gb|AAM20004.1| putative
           glycerol-3-phosphate dehydrogenase [Arabidopsis
           thaliana] gi|332641376|gb|AEE74897.1|
           glycerol-3-phosphate dehydrogenase SDP6 [Arabidopsis
           thaliana]
          Length = 629

 Score =  186 bits (472), Expect = 2e-45
 Identities = 86/130 (66%), Positives = 105/130 (80%)
 Frame = -2

Query: 391 TLVGTTDTSSIITDLPKPREEEIEFILSAIGDYLNIEVQRSDILSTWSGIRPLATDPSSK 212
           T+ GTTD+++ IT LP+P E+EI+FIL AI DYLNI+V+R+D+LS WSGIRPLA DP++K
Sbjct: 354 TVAGTTDSNTSITSLPEPHEDEIQFILDAISDYLNIKVRRTDVLSAWSGIRPLAMDPTAK 413

Query: 211 DTSSISRDHIVNVECPGLVTIAGGKWTTYRSMAEDVIDAAIKHGELNPLSSCATANLPLI 32
            T SISRDH+V  E PGLVTI GGKWTTYRSMAED +DAAIK G+L P + C T  L L+
Sbjct: 414 STESISRDHVVFEENPGLVTITGGKWTTYRSMAEDAVDAAIKSGQLKPTNECVTQKLQLL 473

Query: 31  GAYGWEPLYF 2
           G+YGWEP  F
Sbjct: 474 GSYGWEPSSF 483


>ref|XP_003590261.1| Glycerol-3-phosphate dehydrogenase SDP6 [Medicago truncatula]
           gi|355479309|gb|AES60512.1| Glycerol-3-phosphate
           dehydrogenase SDP6 [Medicago truncatula]
          Length = 626

 Score =  185 bits (470), Expect = 3e-45
 Identities = 85/130 (65%), Positives = 105/130 (80%)
 Frame = -2

Query: 391 TLVGTTDTSSIITDLPKPREEEIEFILSAIGDYLNIEVQRSDILSTWSGIRPLATDPSSK 212
           TL GTTD+++ IT LP+P E+EI+FIL AI DYLN++V+RSD+LS WSGIRPLATDPS+K
Sbjct: 351 TLAGTTDSNTAITFLPEPHEDEIQFILDAISDYLNVKVRRSDVLSAWSGIRPLATDPSAK 410

Query: 211 DTSSISRDHIVNVECPGLVTIAGGKWTTYRSMAEDVIDAAIKHGELNPLSSCATANLPLI 32
           +T SISRDH+V  E PGLVT+ GGKWTTYRSMAED +D AIK G+L P+  C T NL ++
Sbjct: 411 NTESISRDHVVFEEHPGLVTVTGGKWTTYRSMAEDAVDVAIKAGKLTPVGGCVTNNLRIV 470

Query: 31  GAYGWEPLYF 2
           G  GW+P  F
Sbjct: 471 GGEGWDPASF 480


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