BLASTX nr result

ID: Coptis24_contig00019972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019972
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21831.3| unnamed protein product [Vitis vinifera]               95   5e-18
emb|CBI35187.3| unnamed protein product [Vitis vinifera]               93   2e-17
emb|CAN81463.1| hypothetical protein VITISV_025304 [Vitis vinifera]    93   2e-17
emb|CBI28755.3| unnamed protein product [Vitis vinifera]               92   6e-17
ref|XP_002266690.1| PREDICTED: uncharacterized protein LOC100256...    92   6e-17

>emb|CBI21831.3| unnamed protein product [Vitis vinifera]
          Length = 352

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 52/128 (40%), Positives = 82/128 (64%)
 Frame = +3

Query: 3   IKLALRCFPDLKDLVNRKGQNILHIAIEFRQVHVIRYILQEKKLENLINGTDKEGNTPLH 182
           IK  L+   D  +L+++ G+NILH+A ++ + +V+ ++L++K LENLIN  DK GNTPLH
Sbjct: 177 IKELLQVSFDSIELLSKHGENILHVAAKYGKDNVVNFVLRKKGLENLINEKDKGGNTPLH 236

Query: 183 CASINSYPHMVNLLVRDKRVDITVLNRKLVTALDIARSRSYESKEDQKQLVLATLLYFDR 362
            A+++++P +VN L  DKRVD+ ++N    TA DIA S  + +   Q  L  +T +Y   
Sbjct: 237 LATMHAHPKVVNYLTWDKRVDVNLVNNMKATAFDIAVSVEHPTSFHQTNLD-STQVY--- 292

Query: 363 SPWCSWGR 386
             WC+  R
Sbjct: 293 --WCTTSR 298


>emb|CBI35187.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 42/94 (44%), Positives = 65/94 (69%)
 Frame = +3

Query: 15  LRCFPDLKDLVNRKGQNILHIAIEFRQVHVIRYILQEKKLENLINGTDKEGNTPLHCASI 194
           + C PD+ DL++ KG+ ILHIA ++ +  V++YIL++  LE++IN  DKEGNTPLH A+I
Sbjct: 102 ITCLPDVYDLIDNKGRTILHIAAQYGKASVVKYILKKPNLESIINEPDKEGNTPLHLAAI 161

Query: 195 NSYPHMVNLLVRDKRVDITVLNRKLVTALDIARS 296
             +  +VN+L  D RVD   +N + +  +DI +S
Sbjct: 162 YGHYGVVNMLAADDRVDKRAMNNEYLKTIDIVQS 195


>emb|CAN81463.1| hypothetical protein VITISV_025304 [Vitis vinifera]
          Length = 409

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 42/94 (44%), Positives = 65/94 (69%)
 Frame = +3

Query: 15  LRCFPDLKDLVNRKGQNILHIAIEFRQVHVIRYILQEKKLENLINGTDKEGNTPLHCASI 194
           + C PD+ DL++ KG+ ILHIA ++ +  V++YIL++  LE++IN  DKEGNTPLH A+I
Sbjct: 73  ITCLPDVYDLIDNKGRTILHIAAQYGKASVVKYILKKPNLESIINEPDKEGNTPLHLAAI 132

Query: 195 NSYPHMVNLLVRDKRVDITVLNRKLVTALDIARS 296
             +  +VN+L  D RVD   +N + +  +DI +S
Sbjct: 133 YGHYGVVNMLAADDRVDKRAMNNEYLKTIDIVQS 166


>emb|CBI28755.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/108 (41%), Positives = 74/108 (68%)
 Frame = +3

Query: 3   IKLALRCFPDLKDLVNRKGQNILHIAIEFRQVHVIRYILQEKKLENLINGTDKEGNTPLH 182
           +K  L+   D  +L+++ G+NILH+A ++ + +V+ +++++K LENLIN  DKEGNTPLH
Sbjct: 342 VKELLQVSSDSIELLSKHGENILHVAAKYGKDNVVDFLMKKKGLENLINEKDKEGNTPLH 401

Query: 183 CASINSYPHMVNLLVRDKRVDITVLNRKLVTALDIARSRSYESKEDQK 326
            A+  ++P +VN L  DKRVD+ ++N +  TA DIA S  + +   Q+
Sbjct: 402 LATTYAHPKVVNYLTWDKRVDVNLVNNEGQTAFDIAVSVEHPTSLHQR 449


>ref|XP_002266690.1| PREDICTED: uncharacterized protein LOC100256773 [Vitis vinifera]
          Length = 996

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/108 (41%), Positives = 74/108 (68%)
 Frame = +3

Query: 3    IKLALRCFPDLKDLVNRKGQNILHIAIEFRQVHVIRYILQEKKLENLINGTDKEGNTPLH 182
            +K  L+   D  +L+++ G+NILH+A ++ + +V+ +++++K LENLIN  DKEGNTPLH
Sbjct: 685  VKELLQVSSDSIELLSKHGENILHVAAKYGKDNVVDFLMKKKGLENLINEKDKEGNTPLH 744

Query: 183  CASINSYPHMVNLLVRDKRVDITVLNRKLVTALDIARSRSYESKEDQK 326
             A+  ++P +VN L  DKRVD+ ++N +  TA DIA S  + +   Q+
Sbjct: 745  LATTYAHPKVVNYLTWDKRVDVNLVNNEGQTAFDIAVSVEHPTSLHQR 792


Top