BLASTX nr result

ID: Coptis24_contig00019865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019865
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634880.1| PREDICTED: LOW QUALITY PROTEIN: myrcene synt...    93   6e-32
ref|XP_004161807.1| PREDICTED: LOW QUALITY PROTEIN: (-)-alpha-te...    95   1e-31
ref|XP_004150682.1| PREDICTED: (-)-alpha-terpineol synthase-like...    95   1e-31
ref|XP_002267461.2| PREDICTED: myrcene synthase, chloroplastic-l...    91   2e-31
ref|XP_004161822.1| PREDICTED: (-)-alpha-terpineol synthase-like...    94   3e-31

>ref|XP_003634880.1| PREDICTED: LOW QUALITY PROTEIN: myrcene synthase,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 582

 Score = 93.2 bits (230), Expect(2) = 6e-32
 Identities = 42/79 (53%), Positives = 54/79 (68%)
 Frame = -1

Query: 238 DDLGTSEDELARGDVPKAIQCYMHDTGVTAVVARERIRHLADEAWKKQNREQWAESTLPE 59
           DDLGTS DEL RGDVPK+IQCYMH+TG +   AR+ I +L  + WKK N ++  ES  PE
Sbjct: 475 DDLGTSLDELKRGDVPKSIQCYMHETGASEEEARKHISYLIGDTWKKLNEDRAVESPFPE 534

Query: 58  AFVNAVTNLTRTSEIFYQY 2
            F+   TNL R ++  YQ+
Sbjct: 535 TFIGIATNLARMAQCMYQH 553



 Score = 69.3 bits (168), Expect(2) = 6e-32
 Identities = 30/67 (44%), Positives = 46/67 (68%)
 Frame = -2

Query: 480 LLESKWFHTGYKATLGEYLENGCVSITAPMLDFHLYISMTPTITKEELEYIQSYPDLIHW 301
           LLE+KW+++GYK TL EY+ N  +SI+ P++  H Y  +T  IT+E L+ ++ Y ++I W
Sbjct: 407 LLEAKWYYSGYKPTLQEYISNAWISISGPVVLVHAYFFVTNPITEEALQSLERYHNIIRW 466

Query: 300 GSMALRL 280
            SM  RL
Sbjct: 467 SSMISRL 473


>ref|XP_004161807.1| PREDICTED: LOW QUALITY PROTEIN: (-)-alpha-terpineol synthase-like
           [Cucumis sativus]
          Length = 598

 Score = 94.7 bits (234), Expect(2) = 1e-31
 Identities = 44/79 (55%), Positives = 54/79 (68%)
 Frame = -1

Query: 238 DDLGTSEDELARGDVPKAIQCYMHDTGVTAVVARERIRHLADEAWKKQNREQWAESTLPE 59
           DDLGTS +ELARGDVPK+IQCYM DTG +   AR+ IRHL DE WKK N+ Q   S  P+
Sbjct: 484 DDLGTSSNELARGDVPKSIQCYMKDTGGSESDARKHIRHLIDETWKKLNKVQVENSIFPK 543

Query: 58  AFVNAVTNLTRTSEIFYQY 2
            F+    N+ R ++  YQY
Sbjct: 544 VFIERAKNVARMAQCMYQY 562



 Score = 66.6 bits (161), Expect(2) = 1e-31
 Identities = 29/67 (43%), Positives = 46/67 (68%)
 Frame = -2

Query: 480 LLESKWFHTGYKATLGEYLENGCVSITAPMLDFHLYISMTPTITKEELEYIQSYPDLIHW 301
           +LE+KW+HT +K TL EYL+N  +SI+ P++  H Y+ +T + T E +E ++ Y D++ W
Sbjct: 417 MLEAKWYHTNHKPTLEEYLDNAWISISGPVVLIHAYVFVT-SPTLENMESLKQYVDMVRW 475

Query: 300 GSMALRL 280
            S  LRL
Sbjct: 476 SSTILRL 482


>ref|XP_004150682.1| PREDICTED: (-)-alpha-terpineol synthase-like [Cucumis sativus]
          Length = 485

 Score = 94.7 bits (234), Expect(2) = 1e-31
 Identities = 44/79 (55%), Positives = 54/79 (68%)
 Frame = -1

Query: 238 DDLGTSEDELARGDVPKAIQCYMHDTGVTAVVARERIRHLADEAWKKQNREQWAESTLPE 59
           DDLGTS +ELARGDVPK+IQCYM DTG +   AR+ IRHL DE WKK N+ Q   S  P+
Sbjct: 371 DDLGTSSNELARGDVPKSIQCYMKDTGGSESDARKHIRHLIDETWKKLNKVQVENSIFPK 430

Query: 58  AFVNAVTNLTRTSEIFYQY 2
            F+    N+ R ++  YQY
Sbjct: 431 VFIERAKNVARMAQCMYQY 449



 Score = 66.6 bits (161), Expect(2) = 1e-31
 Identities = 29/67 (43%), Positives = 46/67 (68%)
 Frame = -2

Query: 480 LLESKWFHTGYKATLGEYLENGCVSITAPMLDFHLYISMTPTITKEELEYIQSYPDLIHW 301
           +LE+KW+HT +K TL EYL+N  +SI+ P++  H Y+ +T + T E +E ++ Y D++ W
Sbjct: 304 MLEAKWYHTNHKPTLEEYLDNAWISISGPVVLIHAYVFVT-SPTLENMESLKQYVDMVRW 362

Query: 300 GSMALRL 280
            S  LRL
Sbjct: 363 SSTILRL 369


>ref|XP_002267461.2| PREDICTED: myrcene synthase, chloroplastic-like [Vitis vinifera]
          Length = 590

 Score = 91.3 bits (225), Expect(2) = 2e-31
 Identities = 42/79 (53%), Positives = 53/79 (67%)
 Frame = -1

Query: 238 DDLGTSEDELARGDVPKAIQCYMHDTGVTAVVARERIRHLADEAWKKQNREQWAESTLPE 59
           DDLGTS DEL RGDVPK+IQCYM++TG +   AR+ I +L  E WKK N +   ES  PE
Sbjct: 483 DDLGTSLDELKRGDVPKSIQCYMYETGASEEEARKHISYLIGETWKKLNEDGAVESPFPE 542

Query: 58  AFVNAVTNLTRTSEIFYQY 2
            F+   TNL R ++  YQ+
Sbjct: 543 TFIRIATNLARMAQFMYQH 561



 Score = 69.7 bits (169), Expect(2) = 2e-31
 Identities = 30/67 (44%), Positives = 45/67 (67%)
 Frame = -2

Query: 480 LLESKWFHTGYKATLGEYLENGCVSITAPMLDFHLYISMTPTITKEELEYIQSYPDLIHW 301
           LLE+KW+++GY  TL EY+ N  +S++ P+L  H Y  +   ITKE L+ ++ Y ++I W
Sbjct: 415 LLEAKWYYSGYTPTLQEYISNSWISVSGPVLLVHAYFFVANPITKEALQSLERYHNIIRW 474

Query: 300 GSMALRL 280
            SM LRL
Sbjct: 475 SSMILRL 481


>ref|XP_004161822.1| PREDICTED: (-)-alpha-terpineol synthase-like [Cucumis sativus]
          Length = 600

 Score = 93.6 bits (231), Expect(2) = 3e-31
 Identities = 46/81 (56%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
 Frame = -1

Query: 238 DDLGTSEDELARGDVPKAIQCYMHDTGVTAVVARERIRHLADEAWKKQNREQWAE--STL 65
           DDLGTS DEL RGDVPK+IQCYM+DTG +   ARE IRHL DE WKK N+ +     S  
Sbjct: 489 DDLGTSSDELERGDVPKSIQCYMNDTGASESNAREHIRHLIDETWKKLNKTEVENNYSIF 548

Query: 64  PEAFVNAVTNLTRTSEIFYQY 2
           P  FV    NL R ++  YQY
Sbjct: 549 PRVFVERAKNLARMAQCMYQY 569



 Score = 66.6 bits (161), Expect(2) = 3e-31
 Identities = 31/67 (46%), Positives = 45/67 (67%)
 Frame = -2

Query: 480 LLESKWFHTGYKATLGEYLENGCVSITAPMLDFHLYISMTPTITKEELEYIQSYPDLIHW 301
           +LE+KW+HT YK TL EYL+N  +SI+  +L  H Y+ +T + T E +E ++ Y D+I W
Sbjct: 422 MLEAKWYHTSYKPTLEEYLDNAWISISGTVLLLHTYVFVT-SPTLENMESLKQYIDMIRW 480

Query: 300 GSMALRL 280
            S  LRL
Sbjct: 481 SSTILRL 487


Top