BLASTX nr result

ID: Coptis24_contig00019831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019831
         (944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545979.1| PREDICTED: uncharacterized protein LOC100792...   298   2e-78
ref|XP_002275403.1| PREDICTED: uncharacterized protein LOC100261...   298   2e-78
emb|CBI24883.3| unnamed protein product [Vitis vinifera]              288   1e-75
ref|XP_003599451.1| hypothetical protein MTR_3g033530 [Medicago ...   276   4e-72
gb|ABK92537.1| unknown [Populus trichocarpa]                          272   7e-71

>ref|XP_003545979.1| PREDICTED: uncharacterized protein LOC100792233 [Glycine max]
          Length = 358

 Score =  298 bits (762), Expect = 2e-78
 Identities = 159/290 (54%), Positives = 205/290 (70%), Gaps = 8/290 (2%)
 Frame = +1

Query: 19  TTRPSNPNHD---VARFILSRY-SSHGSNNTFLHEKKISYDLQSHETGATTENGALLRMC 186
           TT P NP H+    +RF L RY SS GS+++FLH KKISYD  SH T   TENG + R+ 
Sbjct: 64  TTHPLNPTHEEDEASRFALCRYTSSRGSSHSFLHHKKISYD-GSHATA--TENGDVNRLV 120

Query: 187 ---GSEEHKDVANDHVEQEVXXXXXYGIEWKGRSKGCW-RFFSFDTSSTCCWFFLQLSWR 354
              G  + K   N++VE+       YG     + KG W RFFS+  S +C W +LQ+ WR
Sbjct: 121 IIDGGGDDKGDENENVEEGSFYEYYYG-----KRKGGWKRFFSYRNSDSCAWIWLQMGWR 175

Query: 355 FMVSLGVALLVFFLATNPPPPIIMTKVARIPQFALAEGVDQSGVTTKILTCNCSLNLYVD 534
            +VS G+ALLVF++AT PPPP +  ++AR P+F LAEG+D+SGVTTKILTCNCSLNL ++
Sbjct: 176 ILVSFGIALLVFYIATKPPPPNVSVEIARFPEFKLAEGIDRSGVTTKILTCNCSLNLIIE 235

Query: 535 NKSKLFGLHIRPSTIQMSFGPVVFATTQDPKLYAESHGSSIFTLYVGTKNKAMYGAGRSM 714
           NKS+ FGLHIRP T+ M F  + FA +  P+LYAES G +IF L +G KNK MYGAGRSM
Sbjct: 236 NKSRFFGLHIRPPTMDMKFSNLPFAFSNAPELYAES-GITIFALQLGAKNKPMYGAGRSM 294

Query: 715 QDMLESGEGLPLIVRFRLSTNFKVVWNLINPKFHHNVECMLVLHKKHYNK 864
           QDML+SG GLPL++R  LS++FKVV +LI P+FHH+ EC++ L KK Y+K
Sbjct: 295 QDMLDSGTGLPLVIRVILSSSFKVVPSLIKPRFHHHAECLVFL-KKAYDK 343


>ref|XP_002275403.1| PREDICTED: uncharacterized protein LOC100261971 [Vitis vinifera]
          Length = 354

 Score =  298 bits (762), Expect = 2e-78
 Identities = 165/299 (55%), Positives = 200/299 (66%), Gaps = 14/299 (4%)
 Frame = +1

Query: 1   RTENFITTRPSNPNHDVARF-ILSRYSS--HGSNNTFLHEKKIS-YDLQSHETGATTENG 168
           R+E F+   P+N + +V RF  LSRYSS   GSNN+FLHEKKI  YD QS  TG  TENG
Sbjct: 44  RSETFMNN-PTNTSQEVNRFSYLSRYSSSSRGSNNSFLHEKKIVLYDAQSQGTG--TENG 100

Query: 169 AL----------LRMCGSEEHKDVANDHVEQEVXXXXXYGIEWKGRSKGCWRFFSFDTSS 318
                       + + G  E     +D  E+E           K    G WR+FSF TSS
Sbjct: 101 ENGENRRRMSVGMEVDGGGEEGGGGDD--EEEEYYYGRSSFSSKSGGGGWWRYFSFRTSS 158

Query: 319 TCCWFFLQLSWRFMVSLGVALLVFFLATNPPPPIIMTKVARIPQFALAEGVDQSGVTTKI 498
           +C W  LQ+SWR MVSLG ALLVF +AT PPPP++  K+  I QF L EGVD SGVTTKI
Sbjct: 159 SCLWICLQISWRLMVSLGAALLVFCIATKPPPPMMSIKMTGIRQFGLGEGVDASGVTTKI 218

Query: 499 LTCNCSLNLYVDNKSKLFGLHIRPSTIQMSFGPVVFATTQDPKLYAESHGSSIFTLYVGT 678
           LTCNCS+ L VDNKSKLFGLHI P  +++SF    FAT+   +LYA SHGSS F LYVGT
Sbjct: 219 LTCNCSMALMVDNKSKLFGLHIHPPLVEISFDHHPFATSHGQELYAPSHGSSKFQLYVGT 278

Query: 679 KNKAMYGAGRSMQDMLESGEGLPLIVRFRLSTNFKVVWNLINPKFHHNVECMLVLHKKH 855
           +NK MYGAGR+MQDMLE+GEGLPL +R  L ++F+VVW+LI PKFHH  EC+L L++ +
Sbjct: 279 RNKPMYGAGRAMQDMLETGEGLPLAIRVSLKSSFRVVWSLIVPKFHHQAECLLFLNRAY 337


>emb|CBI24883.3| unnamed protein product [Vitis vinifera]
          Length = 335

 Score =  288 bits (738), Expect = 1e-75
 Identities = 155/288 (53%), Positives = 191/288 (66%), Gaps = 3/288 (1%)
 Frame = +1

Query: 1   RTENFITTRPSNPNHDVARF-ILSRYSS--HGSNNTFLHEKKISYDLQSHETGATTENGA 171
           R+E F+   P+N + +V RF  LSRYSS   GSNN+FLHEKKI   L+    G   + G 
Sbjct: 44  RSETFMNN-PTNTSQEVNRFSYLSRYSSSSRGSNNSFLHEKKIV--LRRMSVGMEVDGGG 100

Query: 172 LLRMCGSEEHKDVANDHVEQEVXXXXXYGIEWKGRSKGCWRFFSFDTSSTCCWFFLQLSW 351
                     ++      E+E           K    G WR+FSF TSS+C W  LQ+SW
Sbjct: 101 ----------EEGGGGDDEEEEYYYGRSSFSSKSGGGGWWRYFSFRTSSSCLWICLQISW 150

Query: 352 RFMVSLGVALLVFFLATNPPPPIIMTKVARIPQFALAEGVDQSGVTTKILTCNCSLNLYV 531
           R MVSLG ALLVF +AT PPPP++  K+  I QF L EGVD SGVTTKILTCNCS+ L V
Sbjct: 151 RLMVSLGAALLVFCIATKPPPPMMSIKMTGIRQFGLGEGVDASGVTTKILTCNCSMALMV 210

Query: 532 DNKSKLFGLHIRPSTIQMSFGPVVFATTQDPKLYAESHGSSIFTLYVGTKNKAMYGAGRS 711
           DNKSKLFGLHI P  +++SF    FAT+   +LYA SHGSS F LYVGT+NK MYGAGR+
Sbjct: 211 DNKSKLFGLHIHPPLVEISFDHHPFATSHGQELYAPSHGSSKFQLYVGTRNKPMYGAGRA 270

Query: 712 MQDMLESGEGLPLIVRFRLSTNFKVVWNLINPKFHHNVECMLVLHKKH 855
           MQDMLE+GEGLPL +R  L ++F+VVW+LI PKFHH  EC+L L++ +
Sbjct: 271 MQDMLETGEGLPLAIRVSLKSSFRVVWSLIVPKFHHQAECLLFLNRAY 318


>ref|XP_003599451.1| hypothetical protein MTR_3g033530 [Medicago truncatula]
           gi|355488499|gb|AES69702.1| hypothetical protein
           MTR_3g033530 [Medicago truncatula]
          Length = 350

 Score =  276 bits (707), Expect = 4e-72
 Identities = 148/291 (50%), Positives = 195/291 (67%), Gaps = 8/291 (2%)
 Frame = +1

Query: 22  TRPSNPNHDVA--RFILSRYSS-HGSNNTFLHEKKISYDLQSHETGATTENGALLRMCGS 192
           T P NP H+    RF L RYSS  GSNN+FLH KK+SYD      G  TENG    +   
Sbjct: 65  TLPINPVHEQEPNRFALCRYSSSRGSNNSFLHHKKVSYD------GTATENGDDHHLMIV 118

Query: 193 EEHKDVANDHVEQEVXXXXXYGIEWKGRSKGCW-RFFSFDTSSTCCWFFLQLSWRFMVSL 369
            +   V +D  E+ +     Y         G W R+FS+  S +C W +LQ++WR MVS 
Sbjct: 119 NDSGSVVSDEEEKGLFDEYYY------EKNGGWKRYFSYHNSDSCAWIWLQVTWRVMVSF 172

Query: 370 GVALLVFFLATNPPPPIIMTKVARIPQFALAEGVDQSGVTTKILTCNCSLNLYVDNKSKL 549
           G ALLVF++AT PP P I  ++ARIP+F L EGVD++GVTTKILTCNCS+NL V+NKS+ 
Sbjct: 173 GFALLVFYIATKPPTPKISFEIARIPEFKLGEGVDRTGVTTKILTCNCSMNLIVENKSRF 232

Query: 550 FGLHIRPSTIQMSFGPVVFATTQDPKLYAESHGSSIFTLYVGTKNKAMYGAGRSMQDMLE 729
           FGLHIRP  + M F  + FA +  P+LYAES G ++F L +  KNK MYGAGRSM+DML+
Sbjct: 233 FGLHIRPPKMDMKFSILPFAFSNGPELYAES-GLTVFPLQLEVKNKPMYGAGRSMEDMLD 291

Query: 730 SGEGLPLIVRFRLSTNFKVVWNLINPKFHHNVECMLVL----HKKHYNKAF 870
           SG GLP++++  LS++F+VV  L+ PKFHH VEC++VL    +KKH+++AF
Sbjct: 292 SGRGLPILIQVTLSSSFEVVPALVKPKFHHRVECIVVLKKTYNKKHHSQAF 342


>gb|ABK92537.1| unknown [Populus trichocarpa]
          Length = 342

 Score =  272 bits (696), Expect = 7e-71
 Identities = 145/284 (51%), Positives = 187/284 (65%), Gaps = 5/284 (1%)
 Frame = +1

Query: 34  NPNHDVARFILSRYSS-HGSNNTFLHEKKISYDLQSHETGATTENGALLRMCGSEEHKDV 210
           N N +V+RF LSRYSS  GSNN+FL EKK+S            EN  + R+   + H   
Sbjct: 63  NKNPEVSRFTLSRYSSSRGSNNSFLIEKKVS----------EPENNEVNRLIIVDGHGFN 112

Query: 211 ANDHVEQEVXXXXXYGIEWKGRSKGCWRFFSFDTSSTCCWFFLQLSWRFMVSLGVALLVF 390
            +   E+E          ++ R    WR+ SF  SS+C W  LQ+ WR ++SL VALLVF
Sbjct: 113 GDGGYEEE-GMEEDEDFYYEERGGWWWRYCSFRRSSSCAWVSLQIFWRLVLSLCVALLVF 171

Query: 391 FLATNPPPPIIMTKVARIPQFALAEGVDQSGVTTKILTCNCSLNLYVDNKSKLFGLHIRP 570
           + AT PPPP    K+A I  F LAEGVD SGVTTKIL CNCS++L ++NKSKLFGLHI+P
Sbjct: 172 YAATKPPPPKTSIKIAGIRLFGLAEGVDGSGVTTKILNCNCSIDLLIENKSKLFGLHIQP 231

Query: 571 STIQMSFGPVVFATTQDPKLYAESHGSSIFTLYVGTKNKAMYGAGRSMQDMLESGEGLPL 750
             ++MSFG + FAT++  KLYA+SH S++F L+VGT+NK MYGAG +MQDMLES  GLP+
Sbjct: 232 PVLEMSFGHLTFATSRGSKLYAQSHSSTLFQLFVGTRNKPMYGAGTNMQDMLESENGLPI 291

Query: 751 IVRFRLSTNFKVVWNLINPKFHHNVECMLVL----HKKHYNKAF 870
           ++R  L +NF+VVWNLI P FHH   C+LVL     KKH  + +
Sbjct: 292 VIRVSLRSNFRVVWNLIKPAFHHRAVCLLVLDGAYDKKHRTQVY 335


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