BLASTX nr result

ID: Coptis24_contig00019823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019823
         (1460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77023.1| hypothetical protein VITISV_015334 [Vitis vinifera]   620   e-175
ref|XP_002284823.2| PREDICTED: amidase 1-like [Vitis vinifera] g...   617   e-174
ref|XP_002512364.1| amidase, putative [Ricinus communis] gi|2235...   599   e-169
ref|XP_002319550.1| amidase family protein [Populus trichocarpa]...   583   e-164
ref|XP_003556503.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...   574   e-161

>emb|CAN77023.1| hypothetical protein VITISV_015334 [Vitis vinifera]
          Length = 433

 Score =  620 bits (1598), Expect = e-175
 Identities = 306/435 (70%), Positives = 359/435 (82%), Gaps = 1/435 (0%)
 Frame = -1

Query: 1421 MAKSSDFGAFMEKFTLLPPKTSSPQQLPLSGLTFAVKDIFDVKGYVTGFGNPDWARTHNA 1242
            MAK+SD+GAFME+F L P  +SS  +LPL+GLTFAVKDIFDV GYVTGFGNPDWARTH A
Sbjct: 1    MAKASDYGAFMERFILQP--SSSSHELPLNGLTFAVKDIFDVDGYVTGFGNPDWARTHQA 58

Query: 1241 AVSTAPAVLAVLNGGATCVGKTVMDEMAYSINGENEHYGTPTNPCAPDRVPXXXXXXXXX 1062
            A+ TAP+VLAVL GGATCVGKTVMDEMAYSINGEN+HYGTPTNP APDRVP         
Sbjct: 59   AMLTAPSVLAVLKGGATCVGKTVMDEMAYSINGENKHYGTPTNPQAPDRVPGGSSSGSAV 118

Query: 1061 XXXAELVDFSLGTDTGGSTRVPASYCAIFGFRPSHAVVSTTGVIPMAQSFDTVGWFARDP 882
               A LVDFSLGTDTGGS RVPASYC IFG RPSH VVSTTGVIPMAQSFDTVGWFARDP
Sbjct: 119  AVGAMLVDFSLGTDTGGSVRVPASYCGIFGIRPSHGVVSTTGVIPMAQSFDTVGWFARDP 178

Query: 881  VILNKVGRVLLQLPYVEPVQPRHVVIPNDCFQLLSILSDRLAQIIIESVEKLYGSQVVKH 702
             ILN+VG VLL  P V PV+P  ++IP DCF+LLSI  DR+ Q++I+SVEKL+GS +VKH
Sbjct: 179  EILNRVGHVLLPFPDVNPVKPSQIIIPEDCFRLLSIPIDRVTQVLIKSVEKLFGSDIVKH 238

Query: 701  VNLGDYVSERVPSLEHFIDESNRHQEY-IPSLIALSSAMRCLQRYEFKTNHGKWVTTVKP 525
            V+LGDYV ++V SL+ F+ + N+ QEY IPSL ALS+AMR LQRYEFK NHG+WV  V+P
Sbjct: 239  VSLGDYVEDKVTSLKPFMSKENQTQEYNIPSLAALSTAMRLLQRYEFKNNHGEWVRAVQP 298

Query: 524  NLGPGISERVLEAINSTDEHIDTCHLVKTELRTALNSLLEEFGILAIPTVPGPPPKLRTQ 345
            +LGPGI ERV EA+ +TDE ID C  +KTE R+AL  LL + G+L +PTVPGPPPKL+T 
Sbjct: 299  DLGPGIRERVWEALGTTDEKIDVCQSLKTEFRSALTDLLGDSGVLVLPTVPGPPPKLQTD 358

Query: 344  VSLLETFRARAFSLLSIAGVSGFCQVNIPLGMYDGFPISISLIAKHGADAFLLNIAETLY 165
             + LE+FRARAFSLLSIAGVSGFCQV+IPLG+YD  P+++SL+AKHG+D FLLN+ +TLY
Sbjct: 359  PTTLESFRARAFSLLSIAGVSGFCQVSIPLGLYDNLPVAVSLLAKHGSDGFLLNLVQTLY 418

Query: 164  INLKQQVEVAEKHRY 120
             ++K+QVEVAEK  Y
Sbjct: 419  GSIKEQVEVAEKTSY 433


>ref|XP_002284823.2| PREDICTED: amidase 1-like [Vitis vinifera]
            gi|296088312|emb|CBI36757.3| unnamed protein product
            [Vitis vinifera]
          Length = 433

 Score =  617 bits (1592), Expect = e-174
 Identities = 305/435 (70%), Positives = 359/435 (82%), Gaps = 1/435 (0%)
 Frame = -1

Query: 1421 MAKSSDFGAFMEKFTLLPPKTSSPQQLPLSGLTFAVKDIFDVKGYVTGFGNPDWARTHNA 1242
            MAK+S++GAFME+F L P  +SS  +LPL+GLTFAVKDIFDV GYVTGFGNPDWARTH A
Sbjct: 1    MAKASNYGAFMERFILQP--SSSSHELPLNGLTFAVKDIFDVDGYVTGFGNPDWARTHQA 58

Query: 1241 AVSTAPAVLAVLNGGATCVGKTVMDEMAYSINGENEHYGTPTNPCAPDRVPXXXXXXXXX 1062
            A+ TAP+VLAVL GGATCVGKTVMDEMAYSINGEN+HYGTPTNP APDRVP         
Sbjct: 59   AMLTAPSVLAVLKGGATCVGKTVMDEMAYSINGENKHYGTPTNPQAPDRVPGGSSSGSAV 118

Query: 1061 XXXAELVDFSLGTDTGGSTRVPASYCAIFGFRPSHAVVSTTGVIPMAQSFDTVGWFARDP 882
               A LVDFSLGTDTGGS RVPASYC IFG RPSH VVSTTGVIPMAQSFDTVGWFARDP
Sbjct: 119  AVGAMLVDFSLGTDTGGSVRVPASYCGIFGIRPSHGVVSTTGVIPMAQSFDTVGWFARDP 178

Query: 881  VILNKVGRVLLQLPYVEPVQPRHVVIPNDCFQLLSILSDRLAQIIIESVEKLYGSQVVKH 702
             ILN+VG VLL  P V PV+P  ++IP DCF+LLSI  DR+ Q++I+SVEKL+GS +VKH
Sbjct: 179  EILNRVGHVLLPFPDVNPVKPSQIIIPEDCFRLLSIPIDRVTQVLIKSVEKLFGSDIVKH 238

Query: 701  VNLGDYVSERVPSLEHFIDESNRHQEY-IPSLIALSSAMRCLQRYEFKTNHGKWVTTVKP 525
            V+LGDYV ++V SL+ F+ + N+ QEY IPSL ALS+AMR LQRYEFK NHG+WV  V+P
Sbjct: 239  VSLGDYVEDKVTSLKPFMSKENQTQEYNIPSLAALSTAMRLLQRYEFKNNHGEWVREVQP 298

Query: 524  NLGPGISERVLEAINSTDEHIDTCHLVKTELRTALNSLLEEFGILAIPTVPGPPPKLRTQ 345
            +LGPGI ERV EA+ +TDE ID C  +KTE R+AL  LL + G+L +PTVPGPPPKL+T 
Sbjct: 299  DLGPGIRERVWEALGTTDEKIDVCQSLKTEFRSALTDLLGDSGVLVLPTVPGPPPKLQTD 358

Query: 344  VSLLETFRARAFSLLSIAGVSGFCQVNIPLGMYDGFPISISLIAKHGADAFLLNIAETLY 165
             + LE+FRARAFSLLSIAGVSGFCQV+IPLG+YD  P+++SL+AKHG+D FLLN+ +TLY
Sbjct: 359  PTTLESFRARAFSLLSIAGVSGFCQVSIPLGLYDNLPVAVSLLAKHGSDGFLLNLVQTLY 418

Query: 164  INLKQQVEVAEKHRY 120
             ++K+QVEVAEK  Y
Sbjct: 419  GSIKEQVEVAEKTSY 433


>ref|XP_002512364.1| amidase, putative [Ricinus communis] gi|223548325|gb|EEF49816.1|
            amidase, putative [Ricinus communis]
          Length = 500

 Score =  599 bits (1545), Expect = e-169
 Identities = 297/428 (69%), Positives = 346/428 (80%), Gaps = 1/428 (0%)
 Frame = -1

Query: 1424 NMAKSSDFGAFMEKFTLLPPKTSSPQQLPLSGLTFAVKDIFDVKGYVTGFGNPDWARTHN 1245
            +MA S D+GAFMEKF L P  +SS  QLPL  LTFAVKDIFDV GYVTGFGNPDWARTH+
Sbjct: 72   DMAISPDYGAFMEKFVLKP--SSSSDQLPLHSLTFAVKDIFDVDGYVTGFGNPDWARTHS 129

Query: 1244 AAVSTAPAVLAVLNGGATCVGKTVMDEMAYSINGENEHYGTPTNPCAPDRVPXXXXXXXX 1065
            AA +TAPAVLAVL GGATCVGK +MDEMAYSINGEN HYGTPTNP APDRVP        
Sbjct: 130  AATATAPAVLAVLRGGATCVGKVIMDEMAYSINGENAHYGTPTNPSAPDRVPGGSSSGSA 189

Query: 1064 XXXXAELVDFSLGTDTGGSTRVPASYCAIFGFRPSHAVVSTTGVIPMAQSFDTVGWFARD 885
                A+LVDFSLG+DTGGS RVPASYC I GFRPSH VVS +GVIPMAQSFDTVGWF+R+
Sbjct: 190  VAVGAKLVDFSLGSDTGGSVRVPASYCGILGFRPSHGVVSVSGVIPMAQSFDTVGWFSRN 249

Query: 884  PVILNKVGRVLLQLPYVEPVQPRHVVIPNDCFQLLSILSDRLAQIIIESVEKLYGSQVVK 705
            PVIL  VGR+LLQLP V+  +P  + I  DCFQL SI   R++Q++++SVEKL+G  +VK
Sbjct: 250  PVILKHVGRLLLQLPDVDRTKPNQIFIAEDCFQLSSIPKKRVSQVLVKSVEKLFGGDIVK 309

Query: 704  HVNLGDYVSERVPSLEHFIDESNRHQEY-IPSLIALSSAMRCLQRYEFKTNHGKWVTTVK 528
            HVNLGDYV ++VPSL HF+ +  + QEY I  L ALSSAMR LQRYEFKTNHG+WVTTVK
Sbjct: 310  HVNLGDYVEDKVPSLRHFMSKEIKEQEYNIAPLAALSSAMRMLQRYEFKTNHGEWVTTVK 369

Query: 527  PNLGPGISERVLEAINSTDEHIDTCHLVKTELRTALNSLLEEFGILAIPTVPGPPPKLRT 348
            P+ GPG+ ER+ EA+ ST+E+ID    V+TELR AL +LLEEFGI+AIPTVPG PPKL T
Sbjct: 370  PDFGPGLKERIWEAVRSTEENIDAFQSVRTELRAALTNLLEEFGIIAIPTVPGVPPKLNT 429

Query: 347  QVSLLETFRARAFSLLSIAGVSGFCQVNIPLGMYDGFPISISLIAKHGADAFLLNIAETL 168
              + LE FRA+AFSLLSI GVSGFCQV+IPLGM+DG P+SISL+AKHG+D FLLN+ ETL
Sbjct: 430  DPTTLEIFRAKAFSLLSITGVSGFCQVSIPLGMHDGLPVSISLLAKHGSDVFLLNVVETL 489

Query: 167  YINLKQQV 144
            Y  L+++V
Sbjct: 490  YDTLQEEV 497


>ref|XP_002319550.1| amidase family protein [Populus trichocarpa]
            gi|222857926|gb|EEE95473.1| amidase family protein
            [Populus trichocarpa]
          Length = 427

 Score =  583 bits (1502), Expect = e-164
 Identities = 286/432 (66%), Positives = 343/432 (79%), Gaps = 1/432 (0%)
 Frame = -1

Query: 1421 MAKSSDFGAFMEKFTLLPPKTSSPQQLPLSGLTFAVKDIFDVKGYVTGFGNPDWARTHNA 1242
            M +  D+GAFM+KF L P  TSS    PL GLTFAVKD+   +GYVTGFG+PDWARTH+A
Sbjct: 1    MERDPDYGAFMDKFVLEP--TSSAHDQPLHGLTFAVKDM---EGYVTGFGHPDWARTHSA 55

Query: 1241 AVSTAPAVLAVLNGGATCVGKTVMDEMAYSINGENEHYGTPTNPCAPDRVPXXXXXXXXX 1062
            A STAPAVLAVL GGATCVGKT+MDEMAYSINGEN HYGTP NPCAPDRVP         
Sbjct: 56   ATSTAPAVLAVLRGGATCVGKTIMDEMAYSINGENIHYGTPINPCAPDRVPGGSSSGSAV 115

Query: 1061 XXXAELVDFSLGTDTGGSTRVPASYCAIFGFRPSHAVVSTTGVIPMAQSFDTVGWFARDP 882
               A++VDFSLGTDTGGS RVPASYC I GFRPSH  V + GVIPMAQSFDTVGWFARDP
Sbjct: 116  AVGAKIVDFSLGTDTGGSVRVPASYCGILGFRPSHDAVPSAGVIPMAQSFDTVGWFARDP 175

Query: 881  VILNKVGRVLLQLPYVEPVQPRHVVIPNDCFQLLSILSDRLAQIIIESVEKLYGSQVVKH 702
            VIL++VG +LLQ P ++P++P  V+I  DCFQL +I +DRL Q++++SVEK+YG  ++KH
Sbjct: 176  VILSRVGHILLQSPVMDPIKPSQVIIAEDCFQLSNIPNDRLGQVLVKSVEKIYGGHILKH 235

Query: 701  VNLGDYVSERVPSLEHFIDESNRHQEY-IPSLIALSSAMRCLQRYEFKTNHGKWVTTVKP 525
              LGDYV E+VPSL+HF+    +  E+ IPSL ALS+AMR L+RYEFK NHG+W+T VKP
Sbjct: 236  TVLGDYVKEKVPSLKHFMSNEIKELEHNIPSLAALSNAMRSLERYEFKDNHGEWITAVKP 295

Query: 524  NLGPGISERVLEAINSTDEHIDTCHLVKTELRTALNSLLEEFGILAIPTVPGPPPKLRTQ 345
             LGP ISERV EA+ +T E++D CH VKTEL  AL +LL++FGILAIPTV G PPKL+  
Sbjct: 296  ELGPAISERVWEAVRTTGENVDACHSVKTELHAALATLLQDFGILAIPTVSGLPPKLQAD 355

Query: 344  VSLLETFRARAFSLLSIAGVSGFCQVNIPLGMYDGFPISISLIAKHGADAFLLNIAETLY 165
             + L+ FRA+AF LLSIAGVSGFCQV+IPLGMYD  P+S+SL+AK G+DAFLLN+ E+LY
Sbjct: 356  PTTLKIFRAKAFGLLSIAGVSGFCQVSIPLGMYDNLPVSVSLLAKQGSDAFLLNVVESLY 415

Query: 164  INLKQQVEVAEK 129
              LK+QVE+ EK
Sbjct: 416  GTLKEQVEITEK 427


>ref|XP_003556503.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
            [Glycine max]
          Length = 433

 Score =  574 bits (1479), Expect = e-161
 Identities = 288/435 (66%), Positives = 341/435 (78%), Gaps = 2/435 (0%)
 Frame = -1

Query: 1421 MAKSSDFGAFMEKFTLLPPKTSSPQQLPLSGLTFAVKDIFDVKGYVTGFGNPDWARTHNA 1242
            M  +SD+GAFMEKFTL P   +S   LPL+ LTFAVK+IFDV+GYVTGFGNPDWARTH  
Sbjct: 1    METASDYGAFMEKFTLPP---NSAPSLPLNSLTFAVKEIFDVEGYVTGFGNPDWARTHTV 57

Query: 1241 AVSTAPAVLAVLNGGATCVGKTVMDEMAYSINGENEHYGTPTNPCAPDRVPXXXXXXXXX 1062
            A STAP VLA+L  GATCVGKTVMDEMAYSINGEN HYGTP NPCAPDRVP         
Sbjct: 58   ATSTAPTVLALLRAGATCVGKTVMDEMAYSINGENIHYGTPRNPCAPDRVPGGSSSGSAV 117

Query: 1061 XXXAELVDFSLGTDTGGSTRVPASYCAIFGFRPSHAVVSTTGVIPMAQSFDTVGWFARDP 882
               AELVDFSLGTDTGGS RVPASYC IFGFRPSH  +S +GVIPM+QSFDTVGWFARDP
Sbjct: 118  AVGAELVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAISESGVIPMSQSFDTVGWFARDP 177

Query: 881  VILNKVGRVLLQLPYV-EPVQPRHVVIPNDCFQLLSILSDRLAQIIIESVEKLYGSQVVK 705
            +IL++VG V+LQLP V  P++P  ++I  DCFQL S   D +   +I++VEKLYG  V+K
Sbjct: 178  MILSRVGGVILQLPDVAPPIRPTCIIIAEDCFQLSSTPFDVVTGTVIQAVEKLYGGDVLK 237

Query: 704  HVNLGDYVSERVPSLEHFIDESNRHQEY-IPSLIALSSAMRCLQRYEFKTNHGKWVTTVK 528
            H  LGDYV   VPSL+HF+ + N  Q Y IPSL ALSSAMR LQRYEFK NHG+W++ VK
Sbjct: 238  HEILGDYVKTNVPSLKHFMSKENTDQIYSIPSLAALSSAMRLLQRYEFKNNHGEWISAVK 297

Query: 527  PNLGPGISERVLEAINSTDEHIDTCHLVKTELRTALNSLLEEFGILAIPTVPGPPPKLRT 348
            P+LGPGISERV +A+ +T E+ID C+ +K EL  AL +LL +FG L IPTVPGPPPKL+T
Sbjct: 298  PDLGPGISERVSDALRTTGENIDICYSIKKELHDALAALLGDFGALMIPTVPGPPPKLQT 357

Query: 347  QVSLLETFRARAFSLLSIAGVSGFCQVNIPLGMYDGFPISISLIAKHGADAFLLNIAETL 168
              S LE FRARAFSLLSIAGVSGFCQV+IPLGMY+  P+SISL+A+HGAD FLL++ E+L
Sbjct: 358  NTSDLEIFRARAFSLLSIAGVSGFCQVSIPLGMYNNLPLSISLVARHGADRFLLHLVESL 417

Query: 167  YINLKQQVEVAEKHR 123
            Y ++K + +   +H+
Sbjct: 418  YDSIKDRKQHITEHK 432


Top