BLASTX nr result

ID: Coptis24_contig00019716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019716
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28113.3| unnamed protein product [Vitis vinifera]               74   9e-23
sp|F6HH45.1|TRM52_VITVI RecName: Full=tRNA (guanine(37)-N1)-meth...    74   9e-23
ref|XP_002281488.1| PREDICTED: tRNA (guanine-N(1)-)-methyltransf...    74   9e-23
ref|XP_002515574.1| conserved hypothetical protein [Ricinus comm...    77   5e-21
ref|XP_004139336.1| PREDICTED: tRNA (guanine(37)-N1)-methyltrans...    69   5e-21

>emb|CBI28113.3| unnamed protein product [Vitis vinifera]
          Length = 983

 Score = 73.9 bits (180), Expect(2) = 9e-23
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
 Frame = +1

Query: 58  SASATKRPSEISEEEYGNEDGAELEVTGRIKRSRNKRIRCFKPS-NIRTWEHVDHVVMNL 234
           + +A K+ S   EEE G  D A + V GR K   NKR+R  + S NI+ WEHVDHV+MNL
Sbjct: 352 TVAAVKKHSGSCEEENGTYDNATVSVVGRRKDRMNKRMRGSESSSNIKPWEHVDHVIMNL 411

Query: 235 PASALQFLDA 264
           PASA+QFLDA
Sbjct: 412 PASAIQFLDA 421



 Score = 57.8 bits (138), Expect(2) = 9e-23
 Identities = 21/34 (61%), Positives = 27/34 (79%)
 Frame = +2

Query: 260 MLHRKYWKGSLPWIHCYCFLRSTEIEDSLISTKE 361
           ++ RKYWKGSLPWIHCYCF+R+ E  + +IS  E
Sbjct: 425 LIQRKYWKGSLPWIHCYCFIRANETNEMIISEAE 458


>sp|F6HH45.1|TRM52_VITVI RecName: Full=tRNA (guanine(37)-N1)-methyltransferase 2; AltName:
           Full=M1G-methyltransferase 2; AltName: Full=tRNA [GM37]
           methyltransferase 2; AltName: Full=tRNA
           methyltransferase 5 homolog 2
          Length = 510

 Score = 73.9 bits (180), Expect(2) = 9e-23
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
 Frame = +1

Query: 58  SASATKRPSEISEEEYGNEDGAELEVTGRIKRSRNKRIRCFKPS-NIRTWEHVDHVVMNL 234
           + +A K+ S   EEE G  D A + V GR K   NKR+R  + S NI+ WEHVDHV+MNL
Sbjct: 352 TVAAVKKHSGSCEEENGTYDNATVSVVGRRKDRMNKRMRGSESSSNIKPWEHVDHVIMNL 411

Query: 235 PASALQFLDA 264
           PASA+QFLDA
Sbjct: 412 PASAIQFLDA 421



 Score = 57.8 bits (138), Expect(2) = 9e-23
 Identities = 21/34 (61%), Positives = 27/34 (79%)
 Frame = +2

Query: 260 MLHRKYWKGSLPWIHCYCFLRSTEIEDSLISTKE 361
           ++ RKYWKGSLPWIHCYCF+R+ E  + +IS  E
Sbjct: 425 LIQRKYWKGSLPWIHCYCFIRANETNEMIISEAE 458


>ref|XP_002281488.1| PREDICTED: tRNA (guanine-N(1)-)-methyltransferase,
           mitochondrial-like [Vitis vinifera]
          Length = 506

 Score = 73.9 bits (180), Expect(2) = 9e-23
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
 Frame = +1

Query: 58  SASATKRPSEISEEEYGNEDGAELEVTGRIKRSRNKRIRCFKPS-NIRTWEHVDHVVMNL 234
           + +A K+ S   EEE G  D A + V GR K   NKR+R  + S NI+ WEHVDHV+MNL
Sbjct: 348 TVAAVKKHSGSCEEENGTYDNATVSVVGRRKDRMNKRMRGSESSSNIKPWEHVDHVIMNL 407

Query: 235 PASALQFLDA 264
           PASA+QFLDA
Sbjct: 408 PASAIQFLDA 417



 Score = 57.8 bits (138), Expect(2) = 9e-23
 Identities = 21/34 (61%), Positives = 27/34 (79%)
 Frame = +2

Query: 260 MLHRKYWKGSLPWIHCYCFLRSTEIEDSLISTKE 361
           ++ RKYWKGSLPWIHCYCF+R+ E  + +IS  E
Sbjct: 421 LIQRKYWKGSLPWIHCYCFIRANETNEMIISEAE 454


>ref|XP_002515574.1| conserved hypothetical protein [Ricinus communis]
           gi|223545518|gb|EEF47023.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 544

 Score = 77.0 bits (188), Expect(2) = 5e-21
 Identities = 38/71 (53%), Positives = 47/71 (66%)
 Frame = +1

Query: 64  SATKRPSEISEEEYGNEDGAELEVTGRIKRSRNKRIRCFKPSNIRTWEHVDHVVMNLPAS 243
           +A KRPS   +E  GN  GA +  T + K S NKR+R  +  N + WEHVDHV+MNLPAS
Sbjct: 391 AAVKRPSTCCQEGNGNPHGAAISSTSKRKGSINKRLRASELPNTKPWEHVDHVIMNLPAS 450

Query: 244 ALQFLDASQEV 276
           ALQFLD+   V
Sbjct: 451 ALQFLDSFSSV 461



 Score = 48.9 bits (115), Expect(2) = 5e-21
 Identities = 18/34 (52%), Positives = 27/34 (79%)
 Frame = +2

Query: 260 MLHRKYWKGSLPWIHCYCFLRSTEIEDSLISTKE 361
           ++ RK WKG+LP IHCYCF+R+TE ++S++   E
Sbjct: 461 VIQRKDWKGALPCIHCYCFMRATETKESIVLEAE 494


>ref|XP_004139336.1| PREDICTED: tRNA (guanine(37)-N1)-methyltransferase 2-like [Cucumis
           sativus] gi|449518119|ref|XP_004166091.1| PREDICTED:
           tRNA (guanine(37)-N1)-methyltransferase 2-like [Cucumis
           sativus]
          Length = 497

 Score = 69.3 bits (168), Expect(2) = 5e-21
 Identities = 38/71 (53%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
 Frame = +1

Query: 58  SASATKRPSEISEEEYGN--EDGAELEVTGRIKRSRNKRIRCFKPSNIRTWEHVDHVVMN 231
           S +  KR SE  E E  N   D A   V GR   + NKR++    S+ RTWEHVDHV+MN
Sbjct: 348 SVAVLKRSSESCENEKDNGIADDASTRVAGRRNGNGNKRMKGSSVSHARTWEHVDHVIMN 407

Query: 232 LPASALQFLDA 264
           LPASAL FLDA
Sbjct: 408 LPASALHFLDA 418



 Score = 56.6 bits (135), Expect(2) = 5e-21
 Identities = 21/33 (63%), Positives = 27/33 (81%)
 Frame = +2

Query: 263 LHRKYWKGSLPWIHCYCFLRSTEIEDSLISTKE 361
           + +KYWKGSLPWIHCYCF+R+ E +D +IS  E
Sbjct: 423 IKKKYWKGSLPWIHCYCFMRANENQDFIISEAE 455


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