BLASTX nr result
ID: Coptis24_contig00019700
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019700 (568 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil dom... 84 2e-14 ref|XP_004164664.1| PREDICTED: transmembrane and coiled-coil dom... 83 3e-14 ref|XP_004146487.1| PREDICTED: transmembrane and coiled-coil dom... 83 3e-14 ref|XP_002510477.1| conserved hypothetical protein [Ricinus comm... 82 6e-14 ref|XP_003603726.1| Transmembrane and coiled-coil domain-contain... 81 1e-13 >ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil domain-containing protein 4 [Vitis vinifera] gi|297735050|emb|CBI17412.3| unnamed protein product [Vitis vinifera] Length = 662 Score = 84.0 bits (206), Expect = 2e-14 Identities = 38/57 (66%), Positives = 46/57 (80%) Frame = -1 Query: 568 GLAGIQPIDVPGIENVDVTELIEGHSSYLCTTHQILKQLQIDAFYPILKASSAEPQE 398 GLAGIQP+DVPGIENVDVTELIEGHSSYL T IL +L++D +YP+ + S E Q+ Sbjct: 606 GLAGIQPVDVPGIENVDVTELIEGHSSYLWVTEDILDRLELDTYYPVFRGSPTEHQK 662 >ref|XP_004164664.1| PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like [Cucumis sativus] Length = 673 Score = 83.2 bits (204), Expect = 3e-14 Identities = 36/52 (69%), Positives = 47/52 (90%) Frame = -1 Query: 568 GLAGIQPIDVPGIENVDVTELIEGHSSYLCTTHQILKQLQIDAFYPILKASS 413 GLAGIQPID+PGIENVDVT++IEGHSSYL T QIL+QL+++ +YP+ ++SS Sbjct: 619 GLAGIQPIDIPGIENVDVTDVIEGHSSYLWATRQILEQLELETYYPVFRSSS 670 >ref|XP_004146487.1| PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like [Cucumis sativus] Length = 673 Score = 83.2 bits (204), Expect = 3e-14 Identities = 36/52 (69%), Positives = 47/52 (90%) Frame = -1 Query: 568 GLAGIQPIDVPGIENVDVTELIEGHSSYLCTTHQILKQLQIDAFYPILKASS 413 GLAGIQPID+PGIENVDVT++IEGHSSYL T QIL+QL+++ +YP+ ++SS Sbjct: 619 GLAGIQPIDIPGIENVDVTDVIEGHSSYLWATRQILEQLELETYYPVFRSSS 670 >ref|XP_002510477.1| conserved hypothetical protein [Ricinus communis] gi|223551178|gb|EEF52664.1| conserved hypothetical protein [Ricinus communis] Length = 624 Score = 82.0 bits (201), Expect = 6e-14 Identities = 35/58 (60%), Positives = 48/58 (82%) Frame = -1 Query: 568 GLAGIQPIDVPGIENVDVTELIEGHSSYLCTTHQILKQLQIDAFYPILKASSAEPQEE 395 GLAGIQP+D+PGIENVDVTE IE H+SY+C T +IL QL+++++YP K + +P+EE Sbjct: 562 GLAGIQPVDIPGIENVDVTEYIESHASYVCKTKEILDQLELESYYPDFKNAHPKPREE 619 >ref|XP_003603726.1| Transmembrane and coiled-coil domain-containing protein [Medicago truncatula] gi|355492774|gb|AES73977.1| Transmembrane and coiled-coil domain-containing protein [Medicago truncatula] Length = 663 Score = 81.3 bits (199), Expect = 1e-13 Identities = 37/60 (61%), Positives = 48/60 (80%) Frame = -1 Query: 568 GLAGIQPIDVPGIENVDVTELIEGHSSYLCTTHQILKQLQIDAFYPILKASSAEPQEEIS 389 GLAGIQP+D+PGIENVDVT +IEGHSSYL T +IL+QL++D ++ + K +PQEE S Sbjct: 601 GLAGIQPVDIPGIENVDVTRVIEGHSSYLWMTPKILEQLELDNYFAVYKGEHEKPQEEKS 660