BLASTX nr result

ID: Coptis24_contig00019577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019577
         (1041 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...    96   1e-17
dbj|BAK02550.1| predicted protein [Hordeum vulgare subsp. vulgare]     94   4e-17
ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm...    94   7e-17
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    93   9e-17
ref|XP_002510612.1| conserved hypothetical protein [Ricinus comm...    89   2e-15

>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
           gi|223551309|gb|EEF52795.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 70/265 (26%), Positives = 121/265 (45%), Gaps = 2/265 (0%)
 Frame = -1

Query: 822 DWNKLPDDMLKLIV-KHLGFPDFARFGSVCSSWRSLASVGIHLHHKGGRLPWLIVPYYDV 646
           +W++LP ++L+ I  K   + D+    +VC SW S  ++    H    +LPWL++PY+  
Sbjct: 3   NWSELPQELLQTITQKQSNYVDYISTRAVCKSWWS--AIPKKPHDLLCQLPWLLLPYH-- 58

Query: 645 VGQAPPANTRDNYCPDPVLGFFSILDGAIHKVDIPELQGRRICGSSFGWLITVHGNSEFQ 466
                      N+      GF+++ DG  + +++PE   +R CGSS GWL+ V       
Sbjct: 59  -------KNNPNH-----RGFYNLADGKTYHLELPETIEKRCCGSSHGWLVMVEDTPSIF 106

Query: 465 LLRPFTGKVVNLPPLTTFPHVGISEEKHNSLVYIVKDWFRVFPDMVWDTNRMRNRYIYKA 286
           LL P T   + LP L+TFP+        NS    + ++F     +     R+R  YI KA
Sbjct: 107 LLNPLTKARIELPSLSTFPYFPTEVVYENS--RNINEYFNTKAKL-----RIRETYIRKA 159

Query: 285 ITSPNAESPIVIAIPYQLAMLLFYKPGEDNDDPFIWKKIRGGYVKGGSRQRRPVYSDITF 106
           I S +  +          A++  YK     ++    K     +       ++  Y D+ F
Sbjct: 160 IVSEDPSTG-------NFAVMAIYKTINSTENIAFCKSGDATWFTIQETSQKIHYQDVMF 212

Query: 105 YKGDLYALRCRGEVDL-VKGLDGPS 34
           ++G  YA+  +G V + +  ++ PS
Sbjct: 213 HRGKFYAVDDKGRVSICITDINPPS 237


>dbj|BAK02550.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 473

 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 78/259 (30%), Positives = 116/259 (44%), Gaps = 10/259 (3%)
 Frame = -1

Query: 813 KLPDDMLKLIVKHLGFPDFARFGSVCSSWRSL-ASVGIHLHHKGGRLPWLIVPYYDVVGQ 637
           +LP D+L +I   L  PD  R GSVCSSW S  A +     +K  + P L+         
Sbjct: 68  ELPQDILMVIFAALEIPDLMRAGSVCSSWHSAYAELRTLGQYKQRQTPCLVY-------- 119

Query: 636 APPANTRDNYCPDPVLGFFSILDGAIHKVDIPE--LQGRRICGSSFGWLITVHGNSEFQL 463
              A+  D   PD VL  +S+ +   +K+ +P+  ++ R + GSS GWL+TV   SE  L
Sbjct: 120 ---ASESD---PDDVLCLYSLAEKRSYKLTLPQPPIRSRYLIGSSHGWLVTVDERSEMHL 173

Query: 462 LRPFTGKVVNLPPLTTFPHVGISEEKHNSLVYIVKDWFRVF-----PDMVWDTNRMRNRY 298
           L P T + + LP +TT  HV    +++  +      W         P  ++    +R+R 
Sbjct: 174 LNPITCEQIALPSVTTIEHVKPIFDEYGDVCKYEMSWHSGMRSSRDPPSIFALAELRDRL 233

Query: 297 IYKAITSPNAE--SPIVIAIPYQLAMLLFYKPGEDNDDPFIWKKIRGGYVKGGSRQRRPV 124
            +KA   P+    S IV+ I    A L F K G   DD + W                 +
Sbjct: 234 QWKAFVFPDTSTGSYIVVLIHNPQAQLSFAKAG---DDKWTW------------LPPHLL 278

Query: 123 YSDITFYKGDLYALRCRGE 67
           + D T+  G LYA+   GE
Sbjct: 279 FEDCTYKDGILYAVNTMGE 297


>ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis]
           gi|223551310|gb|EEF52796.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 93.6 bits (231), Expect = 7e-17
 Identities = 75/269 (27%), Positives = 124/269 (46%), Gaps = 7/269 (2%)
 Frame = -1

Query: 819 WNKLPDDMLKLIV-KHLGFPDFARFGSVCSSWRSLASVGIHLHHKGGRLPWLIVPYYDVV 643
           W++LP ++L+ I  K   + D+    +VC SW S  ++    H    RLPWL++P++   
Sbjct: 4   WSELPQELLQTITQKQTNYVDYISTRAVCKSWWS--AIPKKPHDLLCRLPWLLLPHH--- 58

Query: 642 GQAPPANTRDNYCPDPVLGFFSILDGAIHKVDIPELQGRRICGSSFGWLITVHGNSEFQL 463
                   +DN  P+   GF++  DG  + +++PE   +R CGSS GWL+ V       L
Sbjct: 59  --------KDN--PNH-RGFYNPSDGKTYHLELPETVDKRCCGSSHGWLVMVEDTPSIFL 107

Query: 462 LRPFTGKVVNLPPLTTFPHVG---ISEEKHNSLVYIVKDWFRVFPDMVWDTNRMRNRYIY 292
           L P T   + LP L+TFP+     I +   N   Y +++          +  R+R  YI 
Sbjct: 108 LNPLTKSRIELPSLSTFPNFPTEVIYQNSRNLNEYFIRN----------NKLRIRETYIR 157

Query: 291 KAITS--PNAESPIVIAIPYQLAMLLFYKPGEDNDDPFIWKKIRGGYVKGGSRQRRPVYS 118
           KAI S  P+  S +V+AI         YK    +++    K             +   Y 
Sbjct: 158 KAIVSEDPSVGSFMVMAI---------YKTINGSENIAFCKSGDAALFTTQETSQEIHYQ 208

Query: 117 DITFYKGDLYALRCRGEVDL-VKGLDGPS 34
           D+ F++G  Y +  +G V + +  ++ PS
Sbjct: 209 DVMFHRGKFYMVNDKGRVSICITDINPPS 237


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 93.2 bits (230), Expect = 9e-17
 Identities = 75/259 (28%), Positives = 115/259 (44%), Gaps = 3/259 (1%)
 Frame = -1

Query: 831  VVVDWNKLPDDMLKLIVKHL-GFPDFARFGSVCSSWRSLASVGIHLHHKGGRLPWLIVPY 655
            V+ DW+K+PDD LKLI + L    D+ RFG VC SW S+            + PWL++  
Sbjct: 918  VMADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFE-DKECCCPSSKSPWLML-- 974

Query: 654  YDVVGQAPPANTRDNYCPDPVLGFFSILDGAIHKVDIPELQGRRICGSSFGWLITVHGNS 475
                  A   N+        + GF+S L G ++++ +PE+ G+   GS +GWL+T+  + 
Sbjct: 975  ------AEKENSE-------IRGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDL 1021

Query: 474  EFQLLRPFTGKVVNLPPLTTFPHVGISEEKHNSLVYIVKDWFRVFPDMVWDTNRMRNRYI 295
            +  LL P T   + LP L   P++       N+L+           D     +R ++ +I
Sbjct: 1022 DMCLLNPLTRVQILLPSLRACPNL-------NTLI-----------DSSTQGSRSKDIFI 1063

Query: 294  YKAITSPNAESP--IVIAIPYQLAMLLFYKPGEDNDDPFIWKKIRGGYVKGGSRQRRPVY 121
            YKA+ S    SP   V+ I      L F KPG        W  +          +  PV 
Sbjct: 1064 YKAVLSSAPSSPDCAVMIIYSDYGRLAFTKPGHQT-----WTLLES--------ESGPV- 1109

Query: 120  SDITFYKGDLYALRCRGEV 64
             DI ++ G   A+    EV
Sbjct: 1110 DDIIYFNGSFLAVNLSWEV 1128


>ref|XP_002510612.1| conserved hypothetical protein [Ricinus communis]
           gi|223551313|gb|EEF52799.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 402

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 77/263 (29%), Positives = 126/263 (47%), Gaps = 8/263 (3%)
 Frame = -1

Query: 819 WNKLPDDMLKLIV-KHLGFPDFARFGSVCSSWRSLASVGIHLHHKGGRLPWLIVPYYDVV 643
           W +LP ++L++I  KH  + D+    +VC SW+S  +   H +H   +LP+L++PYY   
Sbjct: 5   WAELPPELLQVIADKHTNYVDYLVTRAVCGSWQSAIAKRPH-NHLLCQLPFLLLPYYQ-- 61

Query: 642 GQAPPANTRDNYCPDPVLGFFSILDGAIHKVDIPELQGRRICGSSFGWLITVHGNSEFQL 463
                 N  D        GF++I D  I+ +++PE   +R CGSS GWLI V  +    L
Sbjct: 62  ------NNPDRR------GFYNISDDKIYVLELPEAYEKRCCGSSHGWLIMVEDSPSIFL 109

Query: 462 LRPFTGKVVNLPPLTT---FPHVGISEEKHN-SLVYIVKDWFRVFPDMVWDTNRMRNRYI 295
           L P T + + LP L+T   FP   + E   N +  +I+++ F +           R+ +I
Sbjct: 110 LNPLTRERIELPALSTFSIFPTDVVFENSRNLNENFIMREKFHI-----------RDTFI 158

Query: 294 YKAITS--PNAESPIVIAIPYQL-AMLLFYKPGEDNDDPFIWKKIRGGYVKGGSRQRRPV 124
            KAI S  P+ ++  +  + Y +   L F + G+       W  I     +  S  RR  
Sbjct: 159 VKAILSSDPSLDTNFMAVVIYGVNENLAFCRSGD-----AAWTVID----ETTSPPRR-- 207

Query: 123 YSDITFYKGDLYALRCRGEVDLV 55
           Y D  F  G L+A+   G + ++
Sbjct: 208 YKDALFRAGKLFAVDQTGGISIL 230


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