BLASTX nr result

ID: Coptis24_contig00019459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019459
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280167.1| PREDICTED: origin recognition complex subuni...   258   1e-66
emb|CBI26946.3| unnamed protein product [Vitis vinifera]              247   2e-63
ref|XP_004158973.1| PREDICTED: origin recognition complex subuni...   234   2e-59
ref|XP_002526317.1| origin recognition complex subunit, putative...   233   3e-59
ref|XP_002312422.1| predicted protein [Populus trichocarpa] gi|2...   229   5e-58

>ref|XP_002280167.1| PREDICTED: origin recognition complex subunit 4-like [Vitis
           vinifera]
          Length = 418

 Score =  258 bits (659), Expect = 1e-66
 Identities = 129/178 (72%), Positives = 149/178 (83%)
 Frame = +2

Query: 2   NAKLHSICGDERFVEILDTLSDADSSVHHLLNFLFLGVCNMNLEYGFLSVENFKTALLSI 181
           N KLH I  DERF EI++TL ++DS+V HLL FLF  VC+M+LE GFLS++NF+TA+ SI
Sbjct: 239 NMKLHHILADERFKEIINTLLNSDSTVKHLLRFLFYAVCHMDLESGFLSLDNFRTAMSSI 298

Query: 182 QRPYKLEILQGCSVLELYILACMKRLEDKEQNSYNFNSVMIEYKDIHDSYRISDYYAWNV 361
           QR  K+E LQ CS+LELYIL CMKRLE KEQNSYNFNSVM EYK IHD+Y+ SDYYA NV
Sbjct: 299 QRQPKMEYLQDCSILELYILVCMKRLEVKEQNSYNFNSVMKEYKGIHDAYQTSDYYARNV 358

Query: 362 FLRAFEHLLQRELISFTDNRGQNQSIEFRPVKLLISSQELHQGLKSYRSCPALLQKLM 535
            LRAFEHL+QRELI F DNRG NQSIEFR VKLLISS EL+QGLKSYRSCP +L+KL+
Sbjct: 359 CLRAFEHLVQRELICFMDNRGNNQSIEFRAVKLLISSHELYQGLKSYRSCPVILRKLV 416


>emb|CBI26946.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score =  247 bits (631), Expect = 2e-63
 Identities = 126/172 (73%), Positives = 143/172 (83%), Gaps = 1/172 (0%)
 Frame = +2

Query: 2   NAKLHSICGDERFVEILDTLSDADSSVHHLLNFLFLGVCNMNLEYGFLSVENFKTALLSI 181
           N KLH I  DERF EI++TL ++DS+V HLL FLF  VC+M+LE GFLS++NF+TA+ SI
Sbjct: 246 NMKLHHILADERFKEIINTLLNSDSTVKHLLRFLFYAVCHMDLESGFLSLDNFRTAMSSI 305

Query: 182 QRPYKLEILQG-CSVLELYILACMKRLEDKEQNSYNFNSVMIEYKDIHDSYRISDYYAWN 358
           QR  K+E LQ  CS+LELYIL CMKRLE KEQNSYNFNSVM EYK IHD+Y+ SDYYA N
Sbjct: 306 QRQPKMEYLQADCSILELYILVCMKRLEVKEQNSYNFNSVMKEYKGIHDAYQTSDYYARN 365

Query: 359 VFLRAFEHLLQRELISFTDNRGQNQSIEFRPVKLLISSQELHQGLKSYRSCP 514
           V LRAFEHL+QRELI F DNRG NQSIEFR VKLLISS EL+QGLKSYRSCP
Sbjct: 366 VCLRAFEHLVQRELICFMDNRGNNQSIEFRAVKLLISSHELYQGLKSYRSCP 417


>ref|XP_004158973.1| PREDICTED: origin recognition complex subunit 4-like [Cucumis
           sativus]
          Length = 418

 Score =  234 bits (597), Expect = 2e-59
 Identities = 114/178 (64%), Positives = 140/178 (78%)
 Frame = +2

Query: 2   NAKLHSICGDERFVEILDTLSDADSSVHHLLNFLFLGVCNMNLEYGFLSVENFKTALLSI 181
           NAKLH++  +ERF +++ T  D+DS+V   + +LF  +  +NL+ G L+VENF+ AL   
Sbjct: 240 NAKLHNMLANERFKKVISTYLDSDSTVKQFVRYLFCAISKLNLKSGLLTVENFEHALSDT 299

Query: 182 QRPYKLEILQGCSVLELYILACMKRLEDKEQNSYNFNSVMIEYKDIHDSYRISDYYAWNV 361
           QR  K E ++ CS+LELYIL CMKRLE KEQNSYNFNSVM EYK IHDS+R SDYY+ +V
Sbjct: 300 QRQPKQEYIKDCSILELYILVCMKRLEVKEQNSYNFNSVMKEYKSIHDSFRTSDYYSRSV 359

Query: 362 FLRAFEHLLQRELISFTDNRGQNQSIEFRPVKLLISSQELHQGLKSYRSCPALLQKLM 535
            LRAFEHLLQRELI F DNRG NQSIEFRP KLLI++ ELH GLK+YRSCP++LQKLM
Sbjct: 360 CLRAFEHLLQRELICFADNRGHNQSIEFRPAKLLITAHELHHGLKAYRSCPSILQKLM 417


>ref|XP_002526317.1| origin recognition complex subunit, putative [Ricinus communis]
           gi|223534398|gb|EEF36106.1| origin recognition complex
           subunit, putative [Ricinus communis]
          Length = 370

 Score =  233 bits (595), Expect = 3e-59
 Identities = 117/178 (65%), Positives = 142/178 (79%)
 Frame = +2

Query: 2   NAKLHSICGDERFVEILDTLSDADSSVHHLLNFLFLGVCNMNLEYGFLSVENFKTALLSI 181
           N KLH+I  DERF EI+ T  +++ +V+HLL FLF+ +    L+ GF S+ENFK+AL S+
Sbjct: 191 NGKLHNILADERFKEIVATYLNSNYTVNHLLKFLFVAISKWELKSGFPSLENFKSALSSM 250

Query: 182 QRPYKLEILQGCSVLELYILACMKRLEDKEQNSYNFNSVMIEYKDIHDSYRISDYYAWNV 361
           +R  K E ++ CS+LELY+L CMKRLE KEQ+SYNFNSVM EYK IHDS++ SDYYA NV
Sbjct: 251 RRQPKQECIRDCSILELYLLVCMKRLEVKEQSSYNFNSVMKEYKSIHDSFQTSDYYARNV 310

Query: 362 FLRAFEHLLQRELISFTDNRGQNQSIEFRPVKLLISSQELHQGLKSYRSCPALLQKLM 535
            LRAFE LLQRELI F DNRGQNQS+EFRPVKLLIS  EL +GLKSYRSCP +LQKL+
Sbjct: 311 CLRAFERLLQRELICFMDNRGQNQSVEFRPVKLLISYAELQEGLKSYRSCPTILQKLI 368


>ref|XP_002312422.1| predicted protein [Populus trichocarpa] gi|222852242|gb|EEE89789.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score =  229 bits (584), Expect = 5e-58
 Identities = 115/171 (67%), Positives = 135/171 (78%)
 Frame = +2

Query: 2   NAKLHSICGDERFVEILDTLSDADSSVHHLLNFLFLGVCNMNLEYGFLSVENFKTALLSI 181
           N KL SI  DERF EI+    +++S+ +HLL FLF+ + NM L+ GFLS+ENFK AL SI
Sbjct: 238 NEKLQSILADERFKEIISNYLNSNSTTNHLLRFLFIAISNMELKSGFLSLENFKAALSSI 297

Query: 182 QRPYKLEILQGCSVLELYILACMKRLEDKEQNSYNFNSVMIEYKDIHDSYRISDYYAWNV 361
           QR  K E ++ CS+LELYIL CMKRLE +EQNSYNF+SVM EYK IHDS+  SDYYA NV
Sbjct: 298 QRQPKQECIKDCSILELYILVCMKRLEIREQNSYNFSSVMKEYKSIHDSFPTSDYYAQNV 357

Query: 362 FLRAFEHLLQRELISFTDNRGQNQSIEFRPVKLLISSQELHQGLKSYRSCP 514
            LRAFEHLLQRELI FTDNRG +QSIEFR VKL++S  EL +GLKSYRSCP
Sbjct: 358 CLRAFEHLLQRELICFTDNRGHSQSIEFRQVKLVVSYAELQEGLKSYRSCP 408


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