BLASTX nr result

ID: Coptis24_contig00019440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019440
         (937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281762.2| PREDICTED: uncharacterized protein LOC100257...   218   2e-54
ref|XP_003631224.1| PREDICTED: uncharacterized protein LOC100257...   217   3e-54
emb|CBI27058.3| unnamed protein product [Vitis vinifera]              217   3e-54
ref|XP_002315957.1| predicted protein [Populus trichocarpa] gi|2...   204   2e-50
ref|XP_002893418.1| predicted protein [Arabidopsis lyrata subsp....   196   5e-48

>ref|XP_002281762.2| PREDICTED: uncharacterized protein LOC100257723 isoform 1 [Vitis
           vinifera]
          Length = 369

 Score =  218 bits (555), Expect = 2e-54
 Identities = 131/258 (50%), Positives = 162/258 (62%), Gaps = 14/258 (5%)
 Frame = +2

Query: 206 VINYMETMHTTNK-KSYEEYMQALEEERRKIQVFHRELPLCLDLVNQAIENCKQQVYXXX 382
           +I    TM  ++K +   +Y++ALEEERRKIQVF RELPLCL+LV+QAIE+C+QQ+    
Sbjct: 1   MIRKYSTMDFSDKMQRCHDYIEALEEERRKIQVFQRELPLCLELVSQAIESCRQQMSGTT 60

Query: 383 XXXXXXXXXXXXXXG--GPVLEEFIPIKRSLSSSQEEKS-----DEHKSNESNGTKVDWL 541
                            GPVLEEFIPIK++     E++S     ++ K+N+ +G K DWL
Sbjct: 61  QEYFHGQSECSEQTSSDGPVLEEFIPIKKTSDDEDEQQSHQPNDNKDKNNDKSGKKSDWL 120

Query: 542 RSVQLWNQNPSSPSKEVIHNSQENCEKVIGVKENGGAFHPFHKSKVVKPMVKAVKEAEVG 721
           RSVQLWNQ P  P KE       + E    VK+NGGAFHPF + K V            G
Sbjct: 121 RSVQLWNQTPDPPVKEDTPKKIPSME----VKKNGGAFHPFKRDKAV------------G 164

Query: 722 TNITMTIQNSVPAASTSSTAD-----NSHKKKEDKEGLN-RKTRRCWSPELHRRFLQALQ 883
           TN T     S P+A+TSSTA+     +S  +KE+KEG + RK RRCWSPELHRRFL ALQ
Sbjct: 165 TNPT-----SAPSAATSSTAETATGCSSGSRKEEKEGQSQRKARRCWSPELHRRFLHALQ 219

Query: 884 QLGGSHAATPKQIRELMK 937
           QLGGSH ATPKQIRELMK
Sbjct: 220 QLGGSHVATPKQIRELMK 237


>ref|XP_003631224.1| PREDICTED: uncharacterized protein LOC100257723 isoform 2 [Vitis
           vinifera]
          Length = 362

 Score =  217 bits (553), Expect = 3e-54
 Identities = 127/240 (52%), Positives = 154/240 (64%), Gaps = 13/240 (5%)
 Frame = +2

Query: 257 EYMQALEEERRKIQVFHRELPLCLDLVNQAIENCKQQVYXXXXXXXXXXXXXXXXXG--G 430
           +Y++ALEEERRKIQVF RELPLCL+LV+QAIE+C+QQ+                     G
Sbjct: 12  DYIEALEEERRKIQVFQRELPLCLELVSQAIESCRQQMSGTTQEYFHGQSECSEQTSSDG 71

Query: 431 PVLEEFIPIKRSLSSSQEEKS-----DEHKSNESNGTKVDWLRSVQLWNQNPSSPSKEVI 595
           PVLEEFIPIK++     E++S     ++ K+N+ +G K DWLRSVQLWNQ P  P KE  
Sbjct: 72  PVLEEFIPIKKTSDDEDEQQSHQPNDNKDKNNDKSGKKSDWLRSVQLWNQTPDPPVKEDT 131

Query: 596 HNSQENCEKVIGVKENGGAFHPFHKSKVVKPMVKAVKEAEVGTNITMTIQNSVPAASTSS 775
                + E    VK+NGGAFHPF + K V            GTN T     S P+A+TSS
Sbjct: 132 PKKIPSME----VKKNGGAFHPFKRDKAV------------GTNPT-----SAPSAATSS 170

Query: 776 TAD-----NSHKKKEDKEGLN-RKTRRCWSPELHRRFLQALQQLGGSHAATPKQIRELMK 937
           TA+     +S  +KE+KEG + RK RRCWSPELHRRFL ALQQLGGSH ATPKQIRELMK
Sbjct: 171 TAETATGCSSGSRKEEKEGQSQRKARRCWSPELHRRFLHALQQLGGSHVATPKQIRELMK 230


>emb|CBI27058.3| unnamed protein product [Vitis vinifera]
          Length = 356

 Score =  217 bits (553), Expect = 3e-54
 Identities = 127/240 (52%), Positives = 154/240 (64%), Gaps = 13/240 (5%)
 Frame = +2

Query: 257 EYMQALEEERRKIQVFHRELPLCLDLVNQAIENCKQQVYXXXXXXXXXXXXXXXXXG--G 430
           +Y++ALEEERRKIQVF RELPLCL+LV+QAIE+C+QQ+                     G
Sbjct: 6   DYIEALEEERRKIQVFQRELPLCLELVSQAIESCRQQMSGTTQEYFHGQSECSEQTSSDG 65

Query: 431 PVLEEFIPIKRSLSSSQEEKS-----DEHKSNESNGTKVDWLRSVQLWNQNPSSPSKEVI 595
           PVLEEFIPIK++     E++S     ++ K+N+ +G K DWLRSVQLWNQ P  P KE  
Sbjct: 66  PVLEEFIPIKKTSDDEDEQQSHQPNDNKDKNNDKSGKKSDWLRSVQLWNQTPDPPVKEDT 125

Query: 596 HNSQENCEKVIGVKENGGAFHPFHKSKVVKPMVKAVKEAEVGTNITMTIQNSVPAASTSS 775
                + E    VK+NGGAFHPF + K V            GTN T     S P+A+TSS
Sbjct: 126 PKKIPSME----VKKNGGAFHPFKRDKAV------------GTNPT-----SAPSAATSS 164

Query: 776 TAD-----NSHKKKEDKEGLN-RKTRRCWSPELHRRFLQALQQLGGSHAATPKQIRELMK 937
           TA+     +S  +KE+KEG + RK RRCWSPELHRRFL ALQQLGGSH ATPKQIRELMK
Sbjct: 165 TAETATGCSSGSRKEEKEGQSQRKARRCWSPELHRRFLHALQQLGGSHVATPKQIRELMK 224


>ref|XP_002315957.1| predicted protein [Populus trichocarpa] gi|222864997|gb|EEF02128.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score =  204 bits (519), Expect = 2e-50
 Identities = 124/255 (48%), Positives = 150/255 (58%), Gaps = 28/255 (10%)
 Frame = +2

Query: 257 EYMQALEEERRKIQVFHRELPLCLDLVNQAIENCKQQVYXXXXXXXXXXXXXXXXXG--- 427
           EY++ALEEERRKIQVF RELPLCL+LV QAIE CK+++                      
Sbjct: 12  EYVEALEEERRKIQVFERELPLCLELVTQAIEACKRELSGTTEDHNMHGQSECSEQTSSE 71

Query: 428 GPVLEEFIPIKRSLSSSQEEKSDEH--------------KSNESNGT--------KVDWL 541
           GPVLEEFIPIKR+ SS  EE  + H              K N+SN +        K DWL
Sbjct: 72  GPVLEEFIPIKRTHSSDDEENDNNHDDDDHQEQQSQNDNKRNKSNSSISNNDHKKKSDWL 131

Query: 542 RSVQLWNQNPSSPSKEVIHNSQENCEKVIGVKENG--GAFHPFHKSKVV-KPMVKAVKEA 712
           RSVQLWNQ+P  P K+ +       E    VK NG  GAF PFH+ K V K   +A+ +A
Sbjct: 132 RSVQLWNQSPDPPQKQDLPRKAAVTE----VKRNGAGGAFQPFHREKSVGKSSNQAISKA 187

Query: 713 EVGTNITMTIQNSVPAASTSSTADNSHKKKEDKEGLNRKTRRCWSPELHRRFLQALQQLG 892
                 + T  +S+  A T  T    +KK++ ++G  RK RRCWSPELHRRFL +LQQLG
Sbjct: 188 PPSVPASAT--SSIAGAVTGGTGGGGNKKEDKEKGNQRKQRRCWSPELHRRFLHSLQQLG 245

Query: 893 GSHAATPKQIRELMK 937
           GSHAATPKQIRELMK
Sbjct: 246 GSHAATPKQIRELMK 260


>ref|XP_002893418.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297339260|gb|EFH69677.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 340

 Score =  196 bits (499), Expect = 5e-48
 Identities = 116/245 (47%), Positives = 149/245 (60%), Gaps = 9/245 (3%)
 Frame = +2

Query: 230 HTTNKKSYEEYMQALEEERRKIQVFHRELPLCLDLVNQAIENCKQQV------YXXXXXX 391
           HT   K   EY++ALE E++KIQVF RELPLCL+LV QAIE+C++++             
Sbjct: 12  HTQKMKRCHEYVEALEVEQKKIQVFQRELPLCLELVTQAIESCRKELSESSEHVGGQSEC 71

Query: 392 XXXXXXXXXXXGGPVLEEFIPIKRSLSSSQE-EKSDEHKSNESNGTKVDWLRSVQLWNQN 568
                      GG V EEFIPIK + SSS E +K +E ++N  +  K DWLRSVQLWNQ+
Sbjct: 72  SERTTSECGGGGGVVFEEFIPIKWTSSSSDETDKDEEAENNGGDKKKSDWLRSVQLWNQS 131

Query: 569 PS-SPSKEVIHNSQENCEKVIGVKENGGAFHPFHKSKVVKPMVKAVKEAEVGTNITMTIQ 745
           P   P ++ + N + N   VI VK N GAF PF K K         K A+     T+T  
Sbjct: 132 PDPKPKEDHVINKKTN---VIEVKRNAGAFQPFQKEKP--------KAADSQPLKTITPT 180

Query: 746 NSVPAASTSSTADNSHKKKEDKEG-LNRKTRRCWSPELHRRFLQALQQLGGSHAATPKQI 922
           ++  ++ST+ T     + ++ K+   NRK RRCWSPELHRRFL ALQQLGGSH ATPKQI
Sbjct: 181 STTTSSSTAETVGGKSELEDPKQSHSNRKQRRCWSPELHRRFLHALQQLGGSHVATPKQI 240

Query: 923 RELMK 937
           R+LMK
Sbjct: 241 RDLMK 245


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