BLASTX nr result

ID: Coptis24_contig00019256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019256
         (2180 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249...   447   e-123
ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|2...   397   e-108
ref|XP_002526688.1| conserved hypothetical protein [Ricinus comm...   384   e-104
ref|XP_003623391.1| Integrator complex subunit [Medicago truncat...   330   1e-87
ref|XP_004147305.1| PREDICTED: uncharacterized protein LOC101203...   315   7e-84

>ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249976 [Vitis vinifera]
          Length = 1007

 Score =  447 bits (1151), Expect = e-123
 Identities = 266/589 (45%), Positives = 352/589 (59%), Gaps = 3/589 (0%)
 Frame = -3

Query: 2019 MSVRLQCLEIMYGMATSDRLKVKQTHMHLFLGTLVDSCSLIRCATRKILRLMKLTGVDMF 1840
            ++VRL+ LE M+ MAT D LKV++THMH+FLGTLVD+ + IR   RKILRLMKL  + MF
Sbjct: 374  LNVRLRALETMHHMATCDHLKVQETHMHMFLGTLVDNSTFIRSTARKILRLMKLHDLKMF 433

Query: 1839 KSVTNDLLTNLESYPEDEVEIFNVLFYIGRSHGKLALNFVMEVLQEIEPSSEGDLCFDKS 1660
            +S  + LL NLE YP+DE +I +VLF IGR+HG   +  + +  QEIEPS EG L FD  
Sbjct: 434  QSSIDGLLENLEVYPQDEADILSVLFDIGRNHGNFVVCIIKKFSQEIEPSCEGRLDFDSV 493

Query: 1659 RXXXXXXXXXXXXXSHEQHTKTIPIRIFTYAVPFLGRISPSLRDVISQDTLFAYLSHCSR 1480
            R             S  Q   +IP RIF+YAV  LGRIS +L+DV++Q+TL AYLSHCS+
Sbjct: 494  RVAALLVLAISAPLSEAQKVCSIPSRIFSYAVTLLGRISHALKDVMNQNTLLAYLSHCSK 553

Query: 1479 SAHPPIAETFGQEEQIPSVDGHIPNQSSKDIIDQVSPL-RQIICGTSGSQYQDNLLDLKH 1303
            S     +E+F      P ++G IPN S    ID +SP    +  G S ++ Q  L   K 
Sbjct: 554  STIVDNSESF-----FPMIEGDIPNCS---CIDMISPAGMSLQQGASENENQKRLEPRKS 605

Query: 1302 TILVPEYQPKLNSNQKEATSAIVFVLRTVAATWPLIKSGSIDEIQRTLRSCKDELVTISV 1123
               + + Q +++S   E   +I  +L  +   W L++ G + E+ R LRS ++EL T   
Sbjct: 606  ATPLLDCQLEVHS---EVAKSIKLILLKINDIWFLVQKGCMAEVLRMLRSFREELATYMS 662

Query: 1122 ESNGSVGFLAFACQYLRVIKMLVKVCNHFLPPEKVNGXXXXXXXXXXXXXXXXXXXLRHQ 943
            +S  S   LAF  QYLRV+K+L KV  HFLPP K                      +R++
Sbjct: 663  DSLVSADTLAFTFQYLRVVKLLAKVWEHFLPPRKTQSYRIGELNLLLGKLDRNLKEMRYR 722

Query: 942  FLGFNXXXXXXXXXXXXLNCVLRLSKPEICCRRTTLKKLCATMSNVELLCEKGFIKLSDF 763
            F G +            + C+LRLSK EICC   TLKKL   +S+ E L ++G I+  +F
Sbjct: 723  FRGLSKEEELHVLELILVTCILRLSKVEICCHNATLKKLSMIISHAEFLHKEGSIEPYNF 782

Query: 762  AREL-KSFCQEESSGDDVSYGSFHLERLLELFSLKQFVYSEKIKHIKADLDVPGNDSENP 586
              EL KS  + ++  D  S   F L+RLLE FSLKQF  S   KHIKA++D+PGND+E P
Sbjct: 783  VVELKKSLGEIDTYNDGASCRPFLLKRLLESFSLKQFRLSGSPKHIKAEIDLPGNDTE-P 841

Query: 585  LPFISGLPTAITFQITLHIVSSEDRLWLRMAV-EEIIQYVFLDLNQFEDYDCFKKVAFSV 409
            LPFISGLP  I  +ITL+ VSSE+RLWLRM V E+++++VFLDLNQ    D  +K  F  
Sbjct: 842  LPFISGLPVGIPLEITLYNVSSENRLWLRMIVHEQLMEFVFLDLNQSGGCDEVRKFTFMA 901

Query: 408  PCYITPKAASFSLRACIGKECLYEDVKSAKRMGGPNHDLTFLCNETEVY 262
            P Y TPKA S +LR CIG ECL+EDV      GGP  +L ++C E EVY
Sbjct: 902  PFYRTPKAMSLTLRVCIGMECLFEDVNLITDCGGPTRELVYICQEKEVY 950


>ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|222867661|gb|EEF04792.1|
            predicted protein [Populus trichocarpa]
          Length = 949

 Score =  397 bits (1021), Expect = e-108
 Identities = 254/625 (40%), Positives = 351/625 (56%), Gaps = 10/625 (1%)
 Frame = -3

Query: 2097 VDSVFGVEWSRSSESILVDGHA***HMSVRLQCLEIMYGMATSDRLKVKQTHMHLFLGTL 1918
            + ++   E++R S S+L+D       M+VRL+ LE ++ MAT + L V++ HMH+FLG+L
Sbjct: 335  IHTILYAEFARRSLSLLMD-MLNDDSMAVRLEALETLHHMATFECLHVQEIHMHMFLGSL 393

Query: 1917 VDSCSLIRCATRKILRLMKLTGVDMFKSVTNDLLTNLESYPEDEVEIFNVLFYIGRSHGK 1738
            +D+C LIR   RKI +L+KL+   +F+S  + LL NLE Y +DE ++F+VLF++GRSHG 
Sbjct: 394  LDNCDLIRSIARKIFKLVKLSDFKLFRSSIHGLLQNLERYTKDEADVFSVLFFMGRSHGN 453

Query: 1737 LALNFVMEVLQEIEPSSEGDLCFDKSRXXXXXXXXXXXXXSHEQHTKTIPIRIFTYAVPF 1558
             A   V EV QEIEP  EG L  D +R             S  Q+ + IP R+F+YAV  
Sbjct: 454  FAARVVKEVSQEIEPVLEGKLVLDSARVAAFLVLAISAPLSQNQNGQNIPPRLFSYAVTL 513

Query: 1557 LGRISPSLRDVISQDTLFAYLSHCSRSAHPPIAETFGQEEQ----IPSVDGHIPNQSSKD 1390
            LGRIS +LR+V+ QDTL AYLS CSRS+      T G E +    +P VD  +   S KD
Sbjct: 514  LGRISSALREVVDQDTLLAYLSRCSRSS------TRGTEVEESSLLPVVDDAVLTHSRKD 567

Query: 1389 IIDQVS-PLRQIICGTSGSQ--YQDNLLDLKHTILVPEYQPKLNSNQKEATSAIVFVLRT 1219
            + + V  P+ Q    TS  Q      L DL  +I+  E Q        E   ++  +L  
Sbjct: 568  VNNPVGVPMLQTGNETSKVQPVISCELEDLATSIV--ECQA---DELDEVMKSVNLILAR 622

Query: 1218 VAATWPLIKSGSIDEIQRTLR-SCKDELVTISVESNGSVGFLAFACQYLRVIKMLVKVCN 1042
            V   W L++S   +   R LR  CK EL  ++  S  S G LAF  QYL+V+K+  K+  
Sbjct: 623  VRDAWLLVQSRCTNVAVRALRLDCKRELAVLTSASLESAGILAFTMQYLQVMKLFAKIWE 682

Query: 1041 HFLPPEKVNGXXXXXXXXXXXXXXXXXXXLRHQFLGFNXXXXXXXXXXXXLNCVLRLSKP 862
            H +   K+                     LR++++GF+            + C+LRLSK 
Sbjct: 683  HVV--WKIRSDETGGLEYLFGKLDVRLRELRYRYIGFSKEEELYVLELIVVACMLRLSKV 740

Query: 861  EICCRRTTLKKLCATMSNVELLCEKGFIKLSDFARELKSFCQE-ESSGDDVSYGSFHLER 685
            EICC  TTLKKL A +S++E+L +KG ++ S+   + K    E ESS   +S   F +  
Sbjct: 741  EICCSPTTLKKLSAIISHIEILNDKGPMEPSNILMDAKKTVHEIESSKAGISCSLFLITN 800

Query: 684  LLELFSLKQFVYSEKIKHIKADLDVPGNDSENPLPFISGLPTAITFQITLHIVSSEDRLW 505
            L++ F+LKQF    +++HI A+LDVPGNDSENPLPF+SGLP AI   ITL+ VSSE+RLW
Sbjct: 801  LVDFFTLKQFSLCPRVRHINAELDVPGNDSENPLPFVSGLPVAIPLDITLYNVSSENRLW 860

Query: 504  LRMAV-EEIIQYVFLDLNQFEDYDCFKKVAFSVPCYITPKAASFSLRACIGKECLYEDVK 328
            L + + +E  Q+VFLD N     +  KK  F  P Y TPKA SFS    IG EC  ED  
Sbjct: 861  LTIRMSQESTQFVFLDSNILGGCNEVKKFTFMAPFYRTPKARSFSSWISIGMECALEDCH 920

Query: 327  SAKRMGGPNHDLTFLCNETEVYFVI 253
              K  GGP   L +LC E EV+  +
Sbjct: 921  LVKHCGGPKRKLVYLCQEKEVHLCL 945


>ref|XP_002526688.1| conserved hypothetical protein [Ricinus communis]
            gi|223533988|gb|EEF35710.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 890

 Score =  384 bits (987), Expect = e-104
 Identities = 230/590 (38%), Positives = 320/590 (54%), Gaps = 6/590 (1%)
 Frame = -3

Query: 2013 VRLQCLEIMYGMATSDRLKVKQTHMHLFLGTLVDSCSLIRCATRKILRLMKLTGVDMFKS 1834
            VRL+ L  ++ MA SD L V++ HMH+FLGTL+D+  +IR A RK+ + +KL  +++F+ 
Sbjct: 347  VRLEALGTLHHMAASDCLNVQEMHMHMFLGTLIDNNDIIRTAARKVYKYVKLPSMELFRL 406

Query: 1833 VTNDLLTNLESYPEDEVEIFNVLFYIGRSHGKLALNFVMEVLQEIEPSSEGDLCFDKSRX 1654
              + LL NL+ YP+DE ++F+VLFY+GRSH     + + E  QEIEP S G++  D +R 
Sbjct: 407  SIDGLLGNLDIYPQDEADVFSVLFYMGRSHKDFTTSIIKEAYQEIEPVSNGNMSLDSARV 466

Query: 1653 XXXXXXXXXXXXSHEQHTKTIPIRIFTYAVPFLGRISPSLRDVISQDTLFAYLSHCSRSA 1474
                        SH+Q+ ++IP R F+YAV  LGRIS +LRD++ Q TL AY+S CSR+ 
Sbjct: 467  AAFLVLAISAPFSHDQNGQSIPPRYFSYAVTLLGRISFALRDILDQSTLLAYISRCSRAP 526

Query: 1473 HPPIAETFGQEEQIPSVDGHIPNQSSKDIIDQVSPLRQIICGTSGSQYQDNLLDLKHTIL 1294
                 E  G+E  +P                          GTS  + Q     LK    
Sbjct: 527  ISSGMEVEGEESSLP-------------------------VGTSNIECQ-----LKEHDQ 556

Query: 1293 VPEYQPKLNSNQKEATSAIVFVLRTVAATWPLIKSGSIDEIQRTLRSCKDELVTISVESN 1114
              ++   + +  K+               W L+ S  I    +TLR+CK+EL  +S+   
Sbjct: 557  FRKFMDLIFAKVKDV--------------WVLVHSSCISAALKTLRACKEELTMLSLALA 602

Query: 1113 GSVGFLAFACQYLRVIKMLVKVCNHFLPPEKVNGXXXXXXXXXXXXXXXXXXXLRHQFLG 934
               G +AF  QYL+V K+L K+  + +   KV                     +R +F+G
Sbjct: 603  EPTGVVAFMSQYLKVTKLLAKIWGNIV--WKVQSYEIGELEILLSKLERRLREMRSRFIG 660

Query: 933  FNXXXXXXXXXXXXLNCVLRLSKPEICCRRTTLKKLCATMSNVELLCEKGFIKLSDFARE 754
            F+            + C+LRLSK EICC  TTLK+L AT+S +E L E+G I+LS+F  E
Sbjct: 661  FSKEEESYVLELILVACILRLSKAEICCYHTTLKRLSATISLIEFLHEEGSIELSNFVVE 720

Query: 753  LKSFCQEESSGDDVSYGS-----FHLERLLELFSLKQFVYSEKIKHIKADLDVPGNDSEN 589
            +K    E      +S G      F   +L++ FS+KQF     ++H+ A ++VP  DSEN
Sbjct: 721  VKKTLHESG----ISIGGTLCSPFGFMKLIDHFSIKQFSSCTGVRHLYAAMNVPNIDSEN 776

Query: 588  PLPFISGLPTAITFQITLHIVSSEDRLWLRMAV-EEIIQYVFLDLNQFEDYDCFKKVAFS 412
            PLPF+ GLP AI   ITLH V SE RLWLR+A+ EE IQ++FLDLN     D  KK  F 
Sbjct: 777  PLPFVPGLPVAIPLTITLHNVLSETRLWLRLAMSEESIQFLFLDLNILGGSDEVKKCTFV 836

Query: 411  VPCYITPKAASFSLRACIGKECLYEDVKSAKRMGGPNHDLTFLCNETEVY 262
             P Y TPK  SF+LR CIG EC++EDV S K  GGP   L +LC E EVY
Sbjct: 837  APFYRTPKTGSFTLRVCIGMECMFEDVHSVKNFGGPKRRLVYLCPEKEVY 886


>ref|XP_003623391.1| Integrator complex subunit [Medicago truncatula]
            gi|355498406|gb|AES79609.1| Integrator complex subunit
            [Medicago truncatula]
          Length = 906

 Score =  330 bits (845), Expect = 1e-87
 Identities = 211/620 (34%), Positives = 328/620 (52%), Gaps = 9/620 (1%)
 Frame = -3

Query: 2091 SVFGVEWSRSSESILVDGHA***HMSVRLQCLEIMYGMATSDRLKVKQTHMHLFLGTLVD 1912
            ++  VE++R +  +L+D       M VRLQ LE M+ MA +  LK+++ H+H+FLG L+D
Sbjct: 305  TILSVEFARETLDLLMD-MLNDDSMVVRLQTLETMHRMAINSCLKLQEKHLHMFLGALLD 363

Query: 1911 SCSLIRCATRKILRLMKLTGVDMFKSVTNDLLTNLESYPEDEVEIFNVLFYIGRSHGKLA 1732
            +   +RCA RKIL+++KL  + MFKS  + LL NL+ Y +DE ++F+V   +GR+H K  
Sbjct: 364  NSREVRCAERKILKIVKLNNLAMFKSSIDRLLENLDRYAQDEADVFSVCSNLGRNHKKFV 423

Query: 1731 LNFVMEVLQEIEPSSEGDLCFDKSRXXXXXXXXXXXXXSHEQHTKTIPIRIFTYAVPFLG 1552
             + + E  +E+E S +G++ F   R              +E    +IP  +F+YAV  LG
Sbjct: 424  CSIIKETFEEVEASFDGNVEFKSGRIAALLIISISAPLFNED-VCSIPPVMFSYAVTLLG 482

Query: 1551 RISPSLRDVISQDTLFAYLSHCSRSAHPPIAETFG-----QEEQIPSVDGHIPNQSSKDI 1387
            RI  +  D++ +D L AYL   SR   PP   T        ++Q+P ++G  PN +S  +
Sbjct: 483  RIYCAFSDIMDRDALLAYLCEKSR---PPSYSTSNINHGEGDQQLPLIEGDTPNCASNGV 539

Query: 1386 IDQVSPLRQIICGTSGSQYQDNLLDLKHTILVPEYQPKLN-SNQKEATSAIVFVLRTVAA 1210
            ID           T  S+       +K    V  YQ + + S   E T+ + ++L     
Sbjct: 540  ID----------STIASEI------MKEQKEVANYQVEQHQSEDSEVTTVVNYILAKFPD 583

Query: 1209 TWPLIKSGSIDEIQRTLRSCKDELVTISVESNGSVGFLAFACQYLRVIKMLVKVCNHFLP 1030
             W + ++G  +E+   LR  KDEL T+  +S GS   LAF   YLR+IK+LV+V  H   
Sbjct: 584  MWQMTETGLTNEV---LRCLKDELATLKFDSLGSDDALAFTLLYLRIIKLLVEVWEHLSL 640

Query: 1029 PEKVNGXXXXXXXXXXXXXXXXXXXLRHQFLGFNXXXXXXXXXXXXLNCVLRLSKPEICC 850
             +                       L  +F+GF+            +   LRL K E  C
Sbjct: 641  GKGSYSHGMGELEFKLRKLDRRVKELMSKFVGFSAEEELNILEIILVTYALRLCKVETIC 700

Query: 849  RRTTLKKLCATMSNVELLCEKGFIKLSDFARELKSFCQE--ESSGDDVSYGSFHLERLLE 676
                 K+L +  S VE + ++     ++F  EL+    E   +S +  S      +R L+
Sbjct: 701  VNLAFKRLTSIYSCVESILKERSDSPTNFVVELRKLLHECQTTSINGASCSPLQFDRCLK 760

Query: 675  LFSLKQFVYSEKIKHIKADLDVPGNDSENPLPFISGLPTAITFQITLHIVSSEDRLWLRM 496
            LFSLK+FV+   I+ +KA+L +  NDS +P PF+SGLP +I  +ITLH + S+ +LWLRM
Sbjct: 761  LFSLKKFVFHGTIRQLKAELRISNNDSLHPFPFVSGLPVSIPCEITLHNIISKCKLWLRM 820

Query: 495  AVEE-IIQYVFLDLNQFEDYDCFKKVAFSVPCYITPKAASFSLRACIGKECLYEDVKSAK 319
            ++++ ++QY+FLDL+        +   F+ P Y TPKA SF+L+ CI  ECL+E+V   +
Sbjct: 821  SLDDGLVQYIFLDLDHLVGSGDVRNFVFAAPFYRTPKANSFTLKVCISLECLFENVCPVQ 880

Query: 318  RMGGPNHDLTFLCNETEVYF 259
            R GGP ++L  LC E +VYF
Sbjct: 881  RYGGPKYELVSLCKEKQVYF 900


>ref|XP_004147305.1| PREDICTED: uncharacterized protein LOC101203415 [Cucumis sativus]
            gi|449501277|ref|XP_004161326.1| PREDICTED:
            uncharacterized protein LOC101225075 [Cucumis sativus]
          Length = 815

 Score =  315 bits (808), Expect(2) = 7e-84
 Identities = 204/590 (34%), Positives = 306/590 (51%), Gaps = 4/590 (0%)
 Frame = -3

Query: 2019 MSVRLQCLEIMYGMATSDRLKVKQTHMHLFLGTLVDSCSLIRCATRKILRLMKLTGVDMF 1840
            +SVRLQ LE ++ MA S+ LK+++ HMH+FL  L D+   +R A RK+L+L+KL  +  F
Sbjct: 251  VSVRLQALETLHHMAMSNCLKLQEAHMHMFLNALKDNDGHVRSALRKLLKLVKLPDLVTF 310

Query: 1839 KSVTNDLLTNLESYPEDEVEIFNVLFYIGRSHGKLALNFVMEVLQEIEPSSEGDLCFDKS 1660
            +   N LL +LESYP+DE ++ +VLF++G++H  +    + +V ++I+P SEG L FD  
Sbjct: 311  QLSFNGLLESLESYPQDESDVLSVLFHMGQNHLNMVDCIIKDVSEQIDPKSEGKLEFDSV 370

Query: 1659 RXXXXXXXXXXXXXSHEQHTKTIPIRIFTYAVPFLGRISPSLRDVISQDTLFAYLSHCSR 1480
            +             S + HT  IP RIF+YA   LGRIS +L D++ Q T+FAYL H S+
Sbjct: 371  KVIAYIVLAISALAS-DNHTLRIPPRIFSYAATLLGRISHALGDIMDQSTIFAYLLHNSK 429

Query: 1479 SAHPPIAETFGQEEQIPSVDGHIPNQSSKDIIDQVSPLRQIICGTSGSQYQD--NLLDLK 1306
              H  +++     E +                            T GS   D   +  LK
Sbjct: 430  --HIGLSDLGFNSEGVSC------------------------SATCGSSVNDIPAIASLK 463

Query: 1305 HTILVPEYQPKLNSNQKEATSAIVFVLRTVAATWPLIKSGSIDEIQRTLRSCKDELVTIS 1126
               ++ E Q K      +A  ++  +L  V   WPLI+SG + E  RTLR CK+ L   +
Sbjct: 464  IPAMIHEQQQK----DDDAIESVKTILLKVQDIWPLIQSGVLHEALRTLRFCKEALGVFT 519

Query: 1125 VESNGSVGFLAFACQYLRVIKMLVKVCNHFLPPEKVNGXXXXXXXXXXXXXXXXXXXLRH 946
              +N   G LAF  QYL+++K++ KV +  +  ++                      LR 
Sbjct: 520  YGTNKYNGALAFTLQYLKILKLVAKVWS-LMSSKRSYPRRTGEWGFLLGKLERGLKELRS 578

Query: 945  QFLGFNXXXXXXXXXXXXLNCVLRLSKPEICCRRTTLKKLCATMSNVELLCEKGFIKLSD 766
            +F G              + C+LRLS  E+CC  T L+KL    SN++ L ++   + S 
Sbjct: 579  RFTGLTKEEEQHILELMLVTCILRLSNGEVCCHLTALRKLSTIASNIQHLLKEECKEPST 638

Query: 765  FARELKSFCQEESSGDDVSY-GSFHLERLLELFSLKQFVYSEKIKHIKADLDVPGNDSEN 589
            F  E++       +    S   S  L  +L+ F+L     SE++KHIKA+L +  N+ E 
Sbjct: 639  FVCEVQRSLSNLGTITPKSLCSSLDLREMLKSFTLGHLEISEELKHIKAELVISDNNYEK 698

Query: 588  PLPFISGLPTAITFQITLHIVSSEDRLWLRMAVEEII-QYVFLDLNQFEDYDCFKKVAFS 412
            PL F+ GLP  I  QI LH V SE +LW R+ ++ +  Q+VFLD       D  ++  ++
Sbjct: 699  PLYFVPGLPVGIPCQIILHNVPSERKLWFRITMDNVTSQFVFLDFLSLGGCDEVREFMYT 758

Query: 411  VPCYITPKAASFSLRACIGKECLYEDVKSAKRMGGPNHDLTFLCNETEVY 262
            VP Y TPKA+SF  R CIG EC +E+ +  +R GGP  DL ++C E EVY
Sbjct: 759  VPFYRTPKASSFIARICIGLECWFENAEVNERRGGPKCDLAYICKEKEVY 808



 Score = 24.3 bits (51), Expect(2) = 7e-84
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = -1

Query: 2051 SLLMDMLNDDT 2019
            SLLMDMLNDD+
Sbjct: 240  SLLMDMLNDDS 250


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