BLASTX nr result

ID: Coptis24_contig00019246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019246
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518956.1| hypothetical protein RCOM_1314900 [Ricinus c...    72   6e-11
gb|AFK37661.1| unknown [Medicago truncatula]                           70   1e-10
emb|CBI34640.3| unnamed protein product [Vitis vinifera]               68   9e-10
ref|XP_002317038.1| AP2/ERF domain-containing transcription fact...    67   1e-09
ref|XP_002300526.1| AP2/ERF domain-containing transcription fact...    67   1e-09

>ref|XP_002518956.1| hypothetical protein RCOM_1314900 [Ricinus communis]
           gi|223541943|gb|EEF43489.1| hypothetical protein
           RCOM_1314900 [Ricinus communis]
          Length = 363

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 43/89 (48%), Positives = 50/89 (56%)
 Frame = +3

Query: 3   GRWVAEIKDSLQKVRLWLGTFDTXXXXXXXXXXXXXXXXXXNARTNFDDHLQGTTTTISG 182
           GRWVAEIKDSLQKVRLWLGTFDT                  NARTNF+  L  +T+   G
Sbjct: 62  GRWVAEIKDSLQKVRLWLGTFDTAEEAARAYDDAARALRGDNARTNFE--LPQSTSNSGG 119

Query: 183 SSNVNRLGGGNGNIIPENLTPFSFEDGCG 269
           +    R G      + +N+ PFSFED CG
Sbjct: 120 A----RAG------LADNIEPFSFEDVCG 138


>gb|AFK37661.1| unknown [Medicago truncatula]
          Length = 335

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 45/95 (47%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
 Frame = +3

Query: 3   GRWVAEIKDSLQKVRLWLGTFDTXXXXXXXXXXXXXXXXXXNARTNFDDHLQGTTTTISG 182
           GRWVAEIKDSLQKVRLWLGTFD+                  NARTNF+  L  + T  SG
Sbjct: 32  GRWVAEIKDSLQKVRLWLGTFDSAEEAARAYDTAARALRGANARTNFE--LPESETNGSG 89

Query: 183 SSNVNRLGGGNGNIIPENLTPFSFED----GCGAE 275
            S      G     + EN  PFSFED    G G+E
Sbjct: 90  GSK----RGAGSKFMLENTEPFSFEDVSDSGSGSE 120


>emb|CBI34640.3| unnamed protein product [Vitis vinifera]
          Length = 748

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/91 (43%), Positives = 48/91 (52%)
 Frame = +3

Query: 3   GRWVAEIKDSLQKVRLWLGTFDTXXXXXXXXXXXXXXXXXXNARTNFDDHLQGTTTTISG 182
           GRWVAEIKDSLQKVRLWLGTFDT                  NARTNF+          S 
Sbjct: 88  GRWVAEIKDSLQKVRLWLGTFDTAEDAARAYDQAARSLRGANARTNFE------LPPSSD 141

Query: 183 SSNVNRLGGGNGNIIPENLTPFSFEDGCGAE 275
           SS+ +     NGN + + + PFSF+  C  +
Sbjct: 142 SSDCD----VNGNCMADGVEPFSFDQFCATQ 168


>ref|XP_002317038.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222860103|gb|EEE97650.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 122

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/89 (43%), Positives = 45/89 (50%)
 Frame = +3

Query: 3   GRWVAEIKDSLQKVRLWLGTFDTXXXXXXXXXXXXXXXXXXNARTNFDDHLQGTTTTISG 182
           GRWVAEIKDSLQKVRLWLGTFDT                  NARTNF+       +   G
Sbjct: 30  GRWVAEIKDSLQKVRLWLGTFDTAEDAARAYDDAARALRGANARTNFELPQPAPNSGPGG 89

Query: 183 SSNVNRLGGGNGNIIPENLTPFSFEDGCG 269
            +N++             + PFSFED CG
Sbjct: 90  RANLS------------EVEPFSFEDVCG 106


>ref|XP_002300526.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222847784|gb|EEE85331.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 338

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/89 (44%), Positives = 46/89 (51%)
 Frame = +3

Query: 3   GRWVAEIKDSLQKVRLWLGTFDTXXXXXXXXXXXXXXXXXXNARTNFDDHLQGTTTTISG 182
           GRWVAEIKDSLQKVRLWLGTFDT                  NARTNF+       +    
Sbjct: 32  GRWVAEIKDSLQKVRLWLGTFDTAEDAARAYDDAARALRGANARTNFELPQPAPNS---- 87

Query: 183 SSNVNRLGGGNGNIIPENLTPFSFEDGCG 269
                  G G G++I   + PFSFE+ CG
Sbjct: 88  -------GAGRGSLI--EVEPFSFEEVCG 107


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