BLASTX nr result
ID: Coptis24_contig00019246
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019246 (436 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002518956.1| hypothetical protein RCOM_1314900 [Ricinus c... 72 6e-11 gb|AFK37661.1| unknown [Medicago truncatula] 70 1e-10 emb|CBI34640.3| unnamed protein product [Vitis vinifera] 68 9e-10 ref|XP_002317038.1| AP2/ERF domain-containing transcription fact... 67 1e-09 ref|XP_002300526.1| AP2/ERF domain-containing transcription fact... 67 1e-09 >ref|XP_002518956.1| hypothetical protein RCOM_1314900 [Ricinus communis] gi|223541943|gb|EEF43489.1| hypothetical protein RCOM_1314900 [Ricinus communis] Length = 363 Score = 71.6 bits (174), Expect = 6e-11 Identities = 43/89 (48%), Positives = 50/89 (56%) Frame = +3 Query: 3 GRWVAEIKDSLQKVRLWLGTFDTXXXXXXXXXXXXXXXXXXNARTNFDDHLQGTTTTISG 182 GRWVAEIKDSLQKVRLWLGTFDT NARTNF+ L +T+ G Sbjct: 62 GRWVAEIKDSLQKVRLWLGTFDTAEEAARAYDDAARALRGDNARTNFE--LPQSTSNSGG 119 Query: 183 SSNVNRLGGGNGNIIPENLTPFSFEDGCG 269 + R G + +N+ PFSFED CG Sbjct: 120 A----RAG------LADNIEPFSFEDVCG 138 >gb|AFK37661.1| unknown [Medicago truncatula] Length = 335 Score = 70.5 bits (171), Expect = 1e-10 Identities = 45/95 (47%), Positives = 50/95 (52%), Gaps = 4/95 (4%) Frame = +3 Query: 3 GRWVAEIKDSLQKVRLWLGTFDTXXXXXXXXXXXXXXXXXXNARTNFDDHLQGTTTTISG 182 GRWVAEIKDSLQKVRLWLGTFD+ NARTNF+ L + T SG Sbjct: 32 GRWVAEIKDSLQKVRLWLGTFDSAEEAARAYDTAARALRGANARTNFE--LPESETNGSG 89 Query: 183 SSNVNRLGGGNGNIIPENLTPFSFED----GCGAE 275 S G + EN PFSFED G G+E Sbjct: 90 GSK----RGAGSKFMLENTEPFSFEDVSDSGSGSE 120 >emb|CBI34640.3| unnamed protein product [Vitis vinifera] Length = 748 Score = 67.8 bits (164), Expect = 9e-10 Identities = 40/91 (43%), Positives = 48/91 (52%) Frame = +3 Query: 3 GRWVAEIKDSLQKVRLWLGTFDTXXXXXXXXXXXXXXXXXXNARTNFDDHLQGTTTTISG 182 GRWVAEIKDSLQKVRLWLGTFDT NARTNF+ S Sbjct: 88 GRWVAEIKDSLQKVRLWLGTFDTAEDAARAYDQAARSLRGANARTNFE------LPPSSD 141 Query: 183 SSNVNRLGGGNGNIIPENLTPFSFEDGCGAE 275 SS+ + NGN + + + PFSF+ C + Sbjct: 142 SSDCD----VNGNCMADGVEPFSFDQFCATQ 168 >ref|XP_002317038.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa] gi|222860103|gb|EEE97650.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa] Length = 122 Score = 67.4 bits (163), Expect = 1e-09 Identities = 39/89 (43%), Positives = 45/89 (50%) Frame = +3 Query: 3 GRWVAEIKDSLQKVRLWLGTFDTXXXXXXXXXXXXXXXXXXNARTNFDDHLQGTTTTISG 182 GRWVAEIKDSLQKVRLWLGTFDT NARTNF+ + G Sbjct: 30 GRWVAEIKDSLQKVRLWLGTFDTAEDAARAYDDAARALRGANARTNFELPQPAPNSGPGG 89 Query: 183 SSNVNRLGGGNGNIIPENLTPFSFEDGCG 269 +N++ + PFSFED CG Sbjct: 90 RANLS------------EVEPFSFEDVCG 106 >ref|XP_002300526.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa] gi|222847784|gb|EEE85331.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa] Length = 338 Score = 67.4 bits (163), Expect = 1e-09 Identities = 40/89 (44%), Positives = 46/89 (51%) Frame = +3 Query: 3 GRWVAEIKDSLQKVRLWLGTFDTXXXXXXXXXXXXXXXXXXNARTNFDDHLQGTTTTISG 182 GRWVAEIKDSLQKVRLWLGTFDT NARTNF+ + Sbjct: 32 GRWVAEIKDSLQKVRLWLGTFDTAEDAARAYDDAARALRGANARTNFELPQPAPNS---- 87 Query: 183 SSNVNRLGGGNGNIIPENLTPFSFEDGCG 269 G G G++I + PFSFE+ CG Sbjct: 88 -------GAGRGSLI--EVEPFSFEEVCG 107