BLASTX nr result

ID: Coptis24_contig00019242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019242
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCI55351.1| PH01B019A14.20 [Phyllostachys edulis]                  96   2e-18
ref|XP_002436735.1| hypothetical protein SORBIDRAFT_10g007815 [S...    83   2e-14
ref|NP_001042787.2| Os01g0290300 [Oryza sativa Japonica Group] g...    80   1e-13
ref|NP_001064234.2| Os10g0170600 [Oryza sativa Japonica Group] g...    79   3e-13
ref|XP_003571430.1| PREDICTED: uncharacterized protein LOC100839...    79   3e-13

>emb|CCI55351.1| PH01B019A14.20 [Phyllostachys edulis]
          Length = 988

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 55/148 (37%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
 Frame = -3

Query: 420 KPECKHCKLTLSYTDGGPTSHLKRHIPICIPRIATISGQGKGYKQSLLSFD----SHDGL 253
           + +C+ C   +SY  GG TSHL RHIP C P    ++   K   Q+ L+F        GL
Sbjct: 381 RAKCRFCYKLMSYKQGGATSHLMRHIPKCTPYQNKVA---KMKAQTNLNFGPATAGDTGL 437

Query: 252 ----TTYKFNQQXXXXXXXXXXXAHEYPFKMVEHELFVLFCKVLNHCFDPINPKPIRDYC 85
               T  +++Q             HEYPF+MVEH  F +  + LN  + PI+ K IR  C
Sbjct: 438 PLIATPREYDQDETRRIISKMIIVHEYPFRMVEHTWFNVLMRYLNSSYQPISRKTIRSEC 497

Query: 84  LKVYECEKSKLRSTLGNVGKIGLTSDLW 1
           +K+Y+ E+  LR +L +V  I LT DLW
Sbjct: 498 IKIYDSEREVLRKSLRSVSHISLTCDLW 525


>ref|XP_002436735.1| hypothetical protein SORBIDRAFT_10g007815 [Sorghum bicolor]
           gi|241914958|gb|EER88102.1| hypothetical protein
           SORBIDRAFT_10g007815 [Sorghum bicolor]
          Length = 307

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
 Frame = -3

Query: 456 KEFIEVIIEGAK-------KPECKHCKLTLSYTDGGPTSHLKRHIPICIPRIATISGQGK 298
           K F E+ ++  K       K +C+ C  + +Y  GG TS L  H+  C      ++   +
Sbjct: 79  KYFKEINVQSNKEFGVMVTKVKCRFCHKSYAYQQGGATSQLNHHLSRCTQFQNKLAKAKR 138

Query: 297 GYKQSLLSFDSHDG---LTTYKFNQQXXXXXXXXXXXAHEYPFKMVEHELFVLFCKVLNH 127
              Q  L++ + DG   +   +++ +            HEY F+MVEH+ F +  K +N 
Sbjct: 139 ILAQGTLNYVADDGCLVINPTEYDHEHTKKLIAKMIIVHEYSFRMVEHKWFNILMKWMNS 198

Query: 126 CFDPINPKPIRDYCLKVYECEKSKLRSTLGNVGKIGLTSDLW 1
            ++ I  K I++ C+KVYE EK  L+  L     I LT+DLW
Sbjct: 199 NYESIGRKTIKNECMKVYESEKELLKKNLRQAESISLTTDLW 240


>ref|NP_001042787.2| Os01g0290300 [Oryza sativa Japonica Group]
           gi|255673131|dbj|BAF04701.2| Os01g0290300 [Oryza sativa
           Japonica Group]
          Length = 751

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
 Frame = -3

Query: 420 KPECKHCKLTLSYTDGGPTSHLKRHIPICIPRIATISGQGKGYKQSLLSFDSHDG----L 253
           K +CK C  +  Y  GG T+ L RH+  C      ++   K   Q  L+F   D     +
Sbjct: 138 KAKCKFCHRSYVYHPGGATTTLNRHLAGCTQYQNKLT---KAKAQGTLNFGPEDDNSLIV 194

Query: 252 TTYKFNQQXXXXXXXXXXXAHEYPFKMVEHELFVLFCKVLNHCFDPINPKPIRDYCLKVY 73
              ++N +           AHEY F+MVEH+ F +  K +N  ++ I  K I++ C++VY
Sbjct: 195 NPTEYNHEHTRELIAKMIIAHEYSFRMVEHKWFNILMKWMNGNYEFIGRKSIKNECMRVY 254

Query: 72  ECEKSKLRSTLGNVGKIGLTSDLW 1
           E EK++L+ +L     I LT+DLW
Sbjct: 255 ESEKNQLKKSLKEAESISLTTDLW 278


>ref|NP_001064234.2| Os10g0170600 [Oryza sativa Japonica Group]
           gi|21671885|gb|AAM74247.1|AC074355_9 Putative
           transposable element [Oryza sativa Japonica Group]
           gi|31430424|gb|AAP52341.1| hAT family dimerisation
           domain containing protein [Oryza sativa Japonica Group]
           gi|255679241|dbj|BAF26148.2| Os10g0170600 [Oryza sativa
           Japonica Group]
          Length = 772

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 56/162 (34%), Positives = 73/162 (45%), Gaps = 5/162 (3%)
 Frame = -3

Query: 471 TSVVLKEFIEVIIEGAKKPECKHCKLTLSYTDGGPTSHLKRHIPICIPRIATISGQGKGY 292
           TSVV K+F +V + G  K EC HC   L       TSHL  H+ IC  R   I    K  
Sbjct: 138 TSVVWKDFKKVKVCGDVKAECLHCHKRLGGKSSNGTSHLHDHLKICTLR--KIKMGPKTL 195

Query: 291 KQSLLSFDSHDG----LTTYKFNQQXXXXXXXXXXXAHEYPFKMVEHELFVLFCKVLNHC 124
            QS L F+S +G    + TY F+              HEYP  +V+H  F  F   L   
Sbjct: 196 AQSSLRFNSIEGGKVSVDTYTFDPAVARRELAAMIILHEYPLSIVDHIGFRRFVSALQPL 255

Query: 123 FDPINPKPIRDYCLKVYECEKSK-LRSTLGNVGKIGLTSDLW 1
           F  +    IR   +  YE EK + L    G   ++G+T+DLW
Sbjct: 256 FKMVTRNTIRKDIMDTYEEEKKRALAYMAGAKSRVGITTDLW 297


>ref|XP_003571430.1| PREDICTED: uncharacterized protein LOC100839006 [Brachypodium
           distachyon]
          Length = 959

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 53/147 (36%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
 Frame = -3

Query: 420 KPECKHCKLTLSYTDGGPTSHLKRHIPICIPRIATISGQGKGYKQSLLSFDSHDG----- 256
           K  C++C   L+Y  G  TSHL RH   C    A +        QS L F    G     
Sbjct: 426 KARCRYCANLLTYHQGSSTSHLLRHKRSCTAIKANLQRLSI---QSRLEFQPISGSSGLP 482

Query: 255 --LTTYKFNQQXXXXXXXXXXXAHEYPFKMVEHELFVLFCKVLNHCFDPINPKPIRDYCL 82
             + T  F+Q            AH+Y F+MVEHE F +  K +N  +  I  K IR  CL
Sbjct: 483 LQVPTNGFDQATVKELIAKMIAAHDYSFRMVEHEWFNVLMKYMNPLYKQIGRKAIRAECL 542

Query: 81  KVYECEKSKLRSTLGNVGKIGLTSDLW 1
           +VY+ EK  L++ L +V  I LT+DLW
Sbjct: 543 RVYKDEKEILKAELKHVAYIILTTDLW 569


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