BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019241
         (1336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15459.3| unnamed protein product [Vitis vinifera]              411   e-112
emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]   409   e-112
ref|XP_004138244.1| PREDICTED: chloroplastic group IIA intron sp...   380   e-103
ref|XP_002317913.1| predicted protein [Populus trichocarpa] gi|2...   377   e-102
ref|XP_002883129.1| EMB1865 [Arabidopsis lyrata subsp. lyrata] g...   358   2e-96

>emb|CBI15459.3| unnamed protein product [Vitis vinifera]
          Length = 830

 Score =  411 bits (1057), Expect = e-112
 Identities = 204/243 (83%), Positives = 226/243 (93%)
 Frame = -3

Query: 1316 GKPLAGTLAEFHEAQARWGKEVSAEELEKMKEEATRAKKARVVKRIEHKLGVAQAKMLRA 1137
            G+PLAGTLAEF+EAQARWG+E+SAEE EKM EEA+RAK ARVVKRIEHKL +AQAK LRA
Sbjct: 542  GQPLAGTLAEFYEAQARWGREISAEEHEKMIEEASRAKSARVVKRIEHKLALAQAKKLRA 601

Query: 1136 EKLLAKIEVSMIPVGPSDDQETITDEERFMFRRVGLKMKAYLPIGIRGVFSGVIENMHLH 957
            E+LLAKIE SMIP GPSDDQETITDEERFMFRR+GL+MKAYL +G+RGVF GVIENMHLH
Sbjct: 602  ERLLAKIEASMIPAGPSDDQETITDEERFMFRRLGLRMKAYLLLGVRGVFDGVIENMHLH 661

Query: 956  WKHRELVKLISKQKILSYVEDSARLLEYESGGILVAIERVPKGYALIYYRGKNYQRPISL 777
            WKHRELVKLISKQK L++VED+ARLLEYESGGILVAIERVPKGYALIYYRGKNY+RP+SL
Sbjct: 662  WKHRELVKLISKQKTLAFVEDTARLLEYESGGILVAIERVPKGYALIYYRGKNYRRPVSL 721

Query: 776  RPRNLLTKAKALKRSVAMQRHEALCQHISELERNIEQMKSEIGDSKDSEDKSTWSSKDES 597
            RPRNLLTKAKALKRSVAMQRHEAL QHISELER IEQMK EIGDSKD+EDK +WS++   
Sbjct: 722  RPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEQMKMEIGDSKDAEDKDSWSTEGHG 781

Query: 596  RFE 588
            +F+
Sbjct: 782  QFD 784


>emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
          Length = 850

 Score =  409 bits (1052), Expect = e-112
 Identities = 203/243 (83%), Positives = 225/243 (92%)
 Frame = -3

Query: 1316 GKPLAGTLAEFHEAQARWGKEVSAEELEKMKEEATRAKKARVVKRIEHKLGVAQAKMLRA 1137
            G+PLAGTLAEF+EAQARWG+E+SAEE EKM EEA+RAK ARVVKRIEHKL +AQAK LR 
Sbjct: 542  GQPLAGTLAEFYEAQARWGREISAEEHEKMIEEASRAKSARVVKRIEHKLALAQAKKLRP 601

Query: 1136 EKLLAKIEVSMIPVGPSDDQETITDEERFMFRRVGLKMKAYLPIGIRGVFSGVIENMHLH 957
            E+LLAKIE SMIP GPSDDQETITDEERFMFRR+GL+MKAYL +G+RGVF GVIENMHLH
Sbjct: 602  ERLLAKIEASMIPAGPSDDQETITDEERFMFRRLGLRMKAYLLLGVRGVFDGVIENMHLH 661

Query: 956  WKHRELVKLISKQKILSYVEDSARLLEYESGGILVAIERVPKGYALIYYRGKNYQRPISL 777
            WKHRELVKLISKQK L++VED+ARLLEYESGGILVAIERVPKGYALIYYRGKNY+RP+SL
Sbjct: 662  WKHRELVKLISKQKTLAFVEDTARLLEYESGGILVAIERVPKGYALIYYRGKNYRRPVSL 721

Query: 776  RPRNLLTKAKALKRSVAMQRHEALCQHISELERNIEQMKSEIGDSKDSEDKSTWSSKDES 597
            RPRNLLTKAKALKRSVAMQRHEAL QHISELER IEQMK EIGDSKD+EDK +WS++   
Sbjct: 722  RPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEQMKMEIGDSKDAEDKDSWSTEGHG 781

Query: 596  RFE 588
            +F+
Sbjct: 782  QFD 784


>ref|XP_004138244.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
            gi|449477054|ref|XP_004154915.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 560

 Score =  380 bits (975), Expect = e-103
 Identities = 189/240 (78%), Positives = 219/240 (91%)
 Frame = -3

Query: 1322 IEGKPLAGTLAEFHEAQARWGKEVSAEELEKMKEEATRAKKARVVKRIEHKLGVAQAKML 1143
            I G+  AGTLAEF+EAQ+RWG+E++AEE EKM EE++RAK AR+V+RIEHKLGVAQAK L
Sbjct: 267  INGQAPAGTLAEFYEAQSRWGREITAEEREKMVEESSRAKTARLVRRIEHKLGVAQAKKL 326

Query: 1142 RAEKLLAKIEVSMIPVGPSDDQETITDEERFMFRRVGLKMKAYLPIGIRGVFSGVIENMH 963
            RAEKLL+KIE SMI   P DDQETITDEER MFRRVGL+M AYLP+GIRGVF GV+ENMH
Sbjct: 327  RAEKLLSKIEASMILSSPDDDQETITDEERVMFRRVGLRMTAYLPMGIRGVFDGVVENMH 386

Query: 962  LHWKHRELVKLISKQKILSYVEDSARLLEYESGGILVAIERVPKGYALIYYRGKNYQRPI 783
            LHWKHRELVKLISKQK L++VE++ARLLEYESGGILV+I+RVPKGYAL+YYRGKNY+RPI
Sbjct: 387  LHWKHRELVKLISKQKTLAFVEETARLLEYESGGILVSIDRVPKGYALVYYRGKNYRRPI 446

Query: 782  SLRPRNLLTKAKALKRSVAMQRHEALCQHISELERNIEQMKSEIGDSKDSEDKSTWSSKD 603
            +LRPRNLLTKAKALKRSVAMQRHEAL QHISELE+NIEQMK EIG ++DS+D++  SS+D
Sbjct: 447  ALRPRNLLTKAKALKRSVAMQRHEALSQHISELEQNIEQMKKEIGVTEDSDDENKLSSQD 506


>ref|XP_002317913.1| predicted protein [Populus trichocarpa] gi|222858586|gb|EEE96133.1|
            predicted protein [Populus trichocarpa]
          Length = 806

 Score =  377 bits (967), Expect = e-102
 Identities = 184/241 (76%), Positives = 217/241 (90%)
 Frame = -3

Query: 1319 EGKPLAGTLAEFHEAQARWGKEVSAEELEKMKEEATRAKKARVVKRIEHKLGVAQAKMLR 1140
            EGK LAGTLAEF+EAQARWG+++S EE EKM EEA++AK AR+VKR EHKL +AQAK LR
Sbjct: 528  EGKALAGTLAEFYEAQARWGRDISTEEREKMIEEASKAKTARLVKRTEHKLAIAQAKKLR 587

Query: 1139 AEKLLAKIEVSMIPVGPSDDQETITDEERFMFRRVGLKMKAYLPIGIRGVFSGVIENMHL 960
            AE LL+KIE +M+P GP  DQETI++EER MFRRVGL+MKAYLP+GIRGVF GVIENMHL
Sbjct: 588  AESLLSKIETTMVPSGPDFDQETISEEERVMFRRVGLRMKAYLPLGIRGVFDGVIENMHL 647

Query: 959  HWKHRELVKLISKQKILSYVEDSARLLEYESGGILVAIERVPKGYALIYYRGKNYQRPIS 780
            HWKHRELVKLISKQK L++VED+A+LLEYESGG+LVAIERVPKG+ALIYYRGKNY+RPIS
Sbjct: 648  HWKHRELVKLISKQKTLAFVEDTAKLLEYESGGVLVAIERVPKGFALIYYRGKNYRRPIS 707

Query: 779  LRPRNLLTKAKALKRSVAMQRHEALCQHISELERNIEQMKSEIGDSKDSEDKSTWSSKDE 600
            +RPRNLLTKAKALKRSVAMQRHEAL QHI ELE+NIE+M  E+G SK+ E+++ WSS++ 
Sbjct: 708  IRPRNLLTKAKALKRSVAMQRHEALSQHIFELEKNIEEMVKEMGLSKEEENENNWSSEEH 767

Query: 599  S 597
            +
Sbjct: 768  A 768


>ref|XP_002883129.1| EMB1865 [Arabidopsis lyrata subsp. lyrata]
            gi|297328969|gb|EFH59388.1| EMB1865 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 846

 Score =  358 bits (919), Expect = 2e-96
 Identities = 178/235 (75%), Positives = 205/235 (87%)
 Frame = -3

Query: 1304 AGTLAEFHEAQARWGKEVSAEELEKMKEEATRAKKARVVKRIEHKLGVAQAKMLRAEKLL 1125
            AGTLAEF+EAQARWGKE++ +  EKM EEA+R   ARVVKRI+HKL +AQ+K  RAEKLL
Sbjct: 575  AGTLAEFYEAQARWGKEITPDHREKMIEEASRVANARVVKRIQHKLNLAQSKFQRAEKLL 634

Query: 1124 AKIEVSMIPVGPSDDQETITDEERFMFRRVGLKMKAYLPIGIRGVFSGVIENMHLHWKHR 945
            +KIE SMIP GP  DQE I++EER MFR+VGLKMKAYLP+GIRGVF GVIENMHLHWKHR
Sbjct: 635  SKIEASMIPNGPDYDQEVISEEERAMFRKVGLKMKAYLPLGIRGVFDGVIENMHLHWKHR 694

Query: 944  ELVKLISKQKILSYVEDSARLLEYESGGILVAIERVPKGYALIYYRGKNYQRPISLRPRN 765
            ELVKLISKQK L++VED+ARLLEYESGG+LVAIE+VPKG+ALIYYRGKNY+RPISLRPRN
Sbjct: 695  ELVKLISKQKNLAFVEDTARLLEYESGGVLVAIEKVPKGFALIYYRGKNYRRPISLRPRN 754

Query: 764  LLTKAKALKRSVAMQRHEALCQHISELERNIEQMKSEIGDSKDSEDKSTWSSKDE 600
            LLTKAKALKRS+AMQRHEAL QHISELER IEQM+SE+     S  +S W + ++
Sbjct: 755  LLTKAKALKRSIAMQRHEALSQHISELERTIEQMQSELTSKTPSYSESEWENDED 809