BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019234
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   222   3e-56
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   222   3e-56
ref|XP_003592732.1| ATP-dependent RNA helicase DHX8 [Medicago tr...   221   5e-56
ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...   220   8e-56
ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|2...   219   1e-55

>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Vitis vinifera]
          Length = 1172

 Score =  222 bits (565), Expect = 3e-56
 Identities = 108/123 (87%), Positives = 114/123 (92%)
 Frame = -2

Query: 369  SRSLRRAQDVRKQLLTIMDRYGLDVVSAGKEFSKIRKAIVAGFFFHAARKDPQEGYRTLV 190
            SRSLRRAQDVRKQLLTIMD+Y LDVVSAGK F+KIRKAI AGFFFHAARKDPQEGYRTLV
Sbjct: 1023 SRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLV 1082

Query: 189  KNQPVYIHPSCSLFQRQPDWLIYDELVRTTKEYMRECTAVDPKWLVELAPRFFKVADSTK 10
            +NQPVYIHPS +LFQRQPDW+IY ELV TTKEYMRE T +DPKWLVELAPRFFKVAD TK
Sbjct: 1083 ENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTK 1142

Query: 9    MSK 1
            MSK
Sbjct: 1143 MSK 1145


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  222 bits (565), Expect = 3e-56
 Identities = 108/123 (87%), Positives = 114/123 (92%)
 Frame = -2

Query: 369  SRSLRRAQDVRKQLLTIMDRYGLDVVSAGKEFSKIRKAIVAGFFFHAARKDPQEGYRTLV 190
            SRSLRRAQDVRKQLLTIMD+Y LDVVSAGK F+KIRKAI AGFFFHAARKDPQEGYRTLV
Sbjct: 1026 SRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLV 1085

Query: 189  KNQPVYIHPSCSLFQRQPDWLIYDELVRTTKEYMRECTAVDPKWLVELAPRFFKVADSTK 10
            +NQPVYIHPS +LFQRQPDW+IY ELV TTKEYMRE T +DPKWLVELAPRFFKVAD TK
Sbjct: 1086 ENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTK 1145

Query: 9    MSK 1
            MSK
Sbjct: 1146 MSK 1148


>ref|XP_003592732.1| ATP-dependent RNA helicase DHX8 [Medicago truncatula]
            gi|355481780|gb|AES62983.1| ATP-dependent RNA helicase
            DHX8 [Medicago truncatula]
          Length = 1154

 Score =  221 bits (563), Expect = 5e-56
 Identities = 107/123 (86%), Positives = 114/123 (92%)
 Frame = -2

Query: 369  SRSLRRAQDVRKQLLTIMDRYGLDVVSAGKEFSKIRKAIVAGFFFHAARKDPQEGYRTLV 190
            SRSLRRAQDVRKQLL+IMD+Y LD+VSAGK FSKIRKAI AGFFFHAARKDPQEGYRTLV
Sbjct: 1005 SRSLRRAQDVRKQLLSIMDKYKLDIVSAGKNFSKIRKAITAGFFFHAARKDPQEGYRTLV 1064

Query: 189  KNQPVYIHPSCSLFQRQPDWLIYDELVRTTKEYMRECTAVDPKWLVELAPRFFKVADSTK 10
            +NQPVYIHPS +LFQRQPDW+IY ELV TTKEYMRE T +DPKWLVELAPRFFKVAD TK
Sbjct: 1065 ENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTK 1124

Query: 9    MSK 1
            MSK
Sbjct: 1125 MSK 1127


>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1177

 Score =  220 bits (561), Expect = 8e-56
 Identities = 107/123 (86%), Positives = 114/123 (92%)
 Frame = -2

Query: 369  SRSLRRAQDVRKQLLTIMDRYGLDVVSAGKEFSKIRKAIVAGFFFHAARKDPQEGYRTLV 190
            SRSLRRAQDVRKQLL+IMD+Y LDVVSAGK F+KIRKAI AGFFFHAARKDPQEGYRTLV
Sbjct: 1028 SRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLV 1087

Query: 189  KNQPVYIHPSCSLFQRQPDWLIYDELVRTTKEYMRECTAVDPKWLVELAPRFFKVADSTK 10
            +NQPVYIHPS +LFQRQPDW+IY ELV TTKEYMRE T +DPKWLVELAPRFFKVAD TK
Sbjct: 1088 ENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTK 1147

Query: 9    MSK 1
            MSK
Sbjct: 1148 MSK 1150


>ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|222859030|gb|EEE96577.1|
            predicted protein [Populus trichocarpa]
          Length = 1207

 Score =  219 bits (559), Expect = 1e-55
 Identities = 108/123 (87%), Positives = 113/123 (91%)
 Frame = -2

Query: 369  SRSLRRAQDVRKQLLTIMDRYGLDVVSAGKEFSKIRKAIVAGFFFHAARKDPQEGYRTLV 190
            SRSLRRAQDVRKQLL+IMD+Y LDVVSAGK FSKIRKAI AGFFFH ARKDPQEGYRTLV
Sbjct: 1058 SRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFSKIRKAITAGFFFHVARKDPQEGYRTLV 1117

Query: 189  KNQPVYIHPSCSLFQRQPDWLIYDELVRTTKEYMRECTAVDPKWLVELAPRFFKVADSTK 10
            +NQPVYIHPS +LFQRQPDW+IY ELV TTKEYMRE T VDPKWLVELAPRFFKVAD TK
Sbjct: 1118 ENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREGTVVDPKWLVELAPRFFKVADPTK 1177

Query: 9    MSK 1
            MSK
Sbjct: 1178 MSK 1180