BLASTX nr result
ID: Coptis24_contig00019216
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019216 (266 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002309893.1| predicted protein [Populus trichocarpa] gi|2... 59 4e-07 ref|XP_002517229.1| hypothetical protein RCOM_1460060 [Ricinus c... 57 2e-06 ref|XP_002891270.1| predicted protein [Arabidopsis lyrata subsp.... 56 3e-06 ref|XP_002306612.1| predicted protein [Populus trichocarpa] gi|2... 56 3e-06 >ref|XP_002309893.1| predicted protein [Populus trichocarpa] gi|222852796|gb|EEE90343.1| predicted protein [Populus trichocarpa] Length = 388 Score = 58.9 bits (141), Expect = 4e-07 Identities = 21/54 (38%), Positives = 36/54 (66%) Frame = +3 Query: 66 IKSKASVCQTCGNKGYEELLLCCSKCQISMKHKYCLMEIPEKVGKDFIYTCQQC 227 + K +VCQ CG++G + L+ C+KC +S +H YCL +P K K+ ++ C++C Sbjct: 8 VVDKMNVCQKCGDRGDVKRLIYCNKCHVSAEHSYCLDTLPRKGEKEVLWACEEC 61 >ref|XP_002517229.1| hypothetical protein RCOM_1460060 [Ricinus communis] gi|223543600|gb|EEF45129.1| hypothetical protein RCOM_1460060 [Ricinus communis] Length = 250 Score = 57.0 bits (136), Expect = 2e-06 Identities = 24/54 (44%), Positives = 33/54 (61%) Frame = +3 Query: 84 VCQTCGNKGYEELLLCCSKCQISMKHKYCLMEIPEKVGKDFIYTCQQCQPSSAK 245 VCQ CG+KG + L+ C KCQ+S +H YCL +P + K +TC +C AK Sbjct: 3 VCQKCGDKGDMKCLVYCVKCQVSSEHSYCLETLPGEGDKMMTWTCAECSLRDAK 56 >ref|XP_002891270.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297337112|gb|EFH67529.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 110 Score = 55.8 bits (133), Expect = 3e-06 Identities = 23/67 (34%), Positives = 36/67 (53%) Frame = +3 Query: 60 VQIKSKASVCQTCGNKGYEELLLCCSKCQISMKHKYCLMEIPEKVGKDFIYTCQQCQPSS 239 + + KA VCQTCG+ G+EE L+ C C+I H+YC+ P + + C+ C S Sbjct: 1 MSVNIKAPVCQTCGDIGFEEALVFCDSCKIESIHRYCIGITPTPFTEYITWICEDCDASD 60 Query: 240 AKQNSPE 260 + + E Sbjct: 61 SDSDCNE 67 >ref|XP_002306612.1| predicted protein [Populus trichocarpa] gi|222856061|gb|EEE93608.1| predicted protein [Populus trichocarpa] Length = 474 Score = 55.8 bits (133), Expect = 3e-06 Identities = 21/49 (42%), Positives = 32/49 (65%) Frame = +3 Query: 81 SVCQTCGNKGYEELLLCCSKCQISMKHKYCLMEIPEKVGKDFIYTCQQC 227 +VCQ CG++GY E L C KC++ +H YCL +P+ +D ++TC C Sbjct: 57 TVCQKCGDRGYPEALNYCVKCKVVAEHTYCLDVVPKDFDEDVVWTCWFC 105